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TranscriptomicsGlobal Analysis of the developmental dynamics of Gossypium hirsutum based on strand-specific transcriptome
Cotton is the most important economic crop that provides natural fibre and by-products such as oil and protein. The global gene expression could provide insight into the biological processes underlying growth and development, which involving suites of genes expressed with temporal and spatial contro...
ORGANISM(S): Gossypium hirsutum 
2016-02-29 | E-GEOD-70369 | biostudies-arrayexpress
TranscriptomicsGlobal analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense
Gossypium barbadense is widely cultivated because of its extra-long staple cotton with superior luster, silkiness and high yield. These economically important traits were selected during initial domestication of an agronomically inferior wild ancestor, followed by millennia of human- mediated select...
ORGANISM(S): Gossypium barbadense 
2008-11-13 | E-GEOD-13022 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue and during fibre development stages.
This SuperSeries is composed of the following subset Series: GSE29566: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue. GSE29567: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stag...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29810 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue.
Transcriptome analysis in cotton under drought stress. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out in leaf tissue. Gossypium hirsutum cv. Bikaneri Nerma was used for the gene expression analysis. Cotton plants were...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29566 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stages.
Transcriptome analysis in cotton during fibre development stages. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out at fibre development stages (0, 5, 10 and 20 dpa/Days post anthesis). Gossypium hirsutum cv. Bikaneri Ne...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29567 | biostudies-arrayexpress
TranscriptomicsAffymetrix Cotton Genome array expression data of root tissue of Gossypium herbaceum under drought stress and watered condition
Genome-wide Transcriptional Analysis of Genes Associated with Drought Stress in Gossypium herbaceum root This experiment was designed to investigate the molecular mechanism associated with drought tolerance in root tissue of Gossypium herbaceum. The gene expression profiles of the root tissue using ...
ORGANISM(S): Gossypium herbaceum 
2012-03-28 | E-GEOD-36249 | biostudies-arrayexpress
TranscriptomicsTranscriptomics and Metabolomics of 10 - 28 day post anthesis cotton fiber from Gossypium hirsutum and Gossypium barbadense
Purpose: The goal of this experiment was to use RNA-seq to compare the two commercial cotton species Gossypium hirsutum and Gossypium barbadense and determine what transcripts may account for the better fiber quality in the latter. Methods: RNA was extracted from Gossypium barbadense or Gossypium hi...
ORGANISM(S): Gossypium barbadense 
2015-06-26 | E-GEOD-64958 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of waterlogging stressed Cotton root and leaf tissue
Global gene expression was compared between roots of cotton plants (variety Sicot 71) flooded for 4 hours and roots of unflooded cotton plants. Global gene expression was also compared between leaves of cotton plants (variety Sicot 71) flooded for 24 hours and leaves of unflooded cotton plants. Wate...
ORGANISM(S): Gossypium hirsutum 
2010-05-17 | E-GEOD-16467 | biostudies-arrayexpress
TranscriptomicsGenome-wide profiling of miRNAs and their target genes during somatic embryogenesis in cotton by small RNA and degradome sequencing
MicroRNAs (miRNAs) are endogenous non-coding ~21 nucleotide (nt) RNAs that regulate gene expression at transcriptional and post-transcriptional levels in plants and animals. They play an important role in development, abiotic stress responses or pathogen responses. miRNAs with their related target g...
ORGANISM(S): Gossypium hirsutum 
2013-03-08 | E-GEOD-41132 | biostudies-arrayexpress
TranscriptomicsTranscriptomics analyses of Gossypium hirsutum fiber in wild-type and immature fiber mutant
We performed a comparative genomics approach between im mutant and TM-1 in order to understand the function of im gene reducing the degree of fiber cell wall development. We compared transcriptome profiles of developing fibers (10, 17, and 28 days post anthesis (DPA)) between two NILs using Affymetr...
ORGANISM(S): Gossypium hirsutum 
2014-05-01 | E-MEXP-3901 | biostudies-arrayexpress
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