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TranscriptomicsGlobal Analysis of the developmental dynamics of Gossypium hirsutum based on strand-specific transcriptome
Cotton is the most important economic crop that provides natural fibre and by-products such as oil and protein. The global gene expression could provide insight into the biological processes underlying growth and development, which involving suites of genes expressed with temporal and spatial contro...
ORGANISM(S): Gossypium hirsutum 
2016-02-29 | E-GEOD-70369 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue and during fibre development stages.
This SuperSeries is composed of the following subset Series: GSE29566: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue. GSE29567: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stag...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29810 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue.
Transcriptome analysis in cotton under drought stress. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out in leaf tissue. Gossypium hirsutum cv. Bikaneri Nerma was used for the gene expression analysis. Cotton plants were...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29566 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stages.
Transcriptome analysis in cotton during fibre development stages. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out at fibre development stages (0, 5, 10 and 20 dpa/Days post anthesis). Gossypium hirsutum cv. Bikaneri Ne...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29567 | biostudies-arrayexpress
TranscriptomicsGene expression in developing wild and domesticated fibers of Upland cotton (Gossypium hirsutum)
We explored the transcriptomic alterations associated with domestication by interrogating a developmental time course of cotton fibers from the wild G. hirsutum var. yucatanense and a representative of an elite domesticated line. 30 chip design - including 2 species (wild and domesticated cotton), b...
ORGANISM(S): Gossypium hirsutum 
2010-12-22 | E-GEOD-23517 | biostudies-arrayexpress
TranscriptomicsTranscriptomics analyses of Gossypium hirsutum fiber in wild-type and immature fiber mutant
We performed a comparative genomics approach between im mutant and TM-1 in order to understand the function of im gene reducing the degree of fiber cell wall development. We compared transcriptome profiles of developing fibers (10, 17, and 28 days post anthesis (DPA)) between two NILs using Affymetr...
ORGANISM(S): Gossypium hirsutum 
2014-05-01 | E-MEXP-3901 | biostudies-arrayexpress
ProteomicsGlobal landscape of protein phosphorylation during plant regeneration initiation in cotton (Gossypium hirsutum L.)
Phosphorylation is one of the most common post-translational modifications and is central to many cellular signaling events; however, little is currently known about the phosphorylation landscape during somatic embryogenesis (SE) for plant regeneration. Here, we systematically analyzed the phosphopr...
ORGANISM(S): Gossypium hirsutum 
2025-03-18 | PXD061812 | Pride
Cotton (gossypium hirsutum l.)  phosphoproteomics  embryogenic differentiation  plant regeneration initiation 
TranscriptomicsGenome-wide profiling of miRNAs and their target genes during somatic embryogenesis in cotton by small RNA and degradome sequencing
MicroRNAs (miRNAs) are endogenous non-coding ~21 nucleotide (nt) RNAs that regulate gene expression at transcriptional and post-transcriptional levels in plants and animals. They play an important role in development, abiotic stress responses or pathogen responses. miRNAs with their related target g...
ORGANISM(S): Gossypium hirsutum 
2013-03-08 | E-GEOD-41132 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of waterlogging stressed Cotton root and leaf tissue
Global gene expression was compared between roots of cotton plants (variety Sicot 71) flooded for 4 hours and roots of unflooded cotton plants. Global gene expression was also compared between leaves of cotton plants (variety Sicot 71) flooded for 24 hours and leaves of unflooded cotton plants. Wate...
ORGANISM(S): Gossypium hirsutum 
2010-05-17 | E-GEOD-16467 | biostudies-arrayexpress
TranscriptomicsComparative analysis of transcriptome profiles of G. hirsutum L. cv. MCU5 and its fuzzless-lintless mutant during fiber development stages.
Cotton is one of the most commercially important Fiber crops in the world and used as a source for natural textile Fiber and cottonseed oil. The fuzzless-lintless ovules of cotton mutants are ideal source for identifying genes involved in Fiber development by comparing with Fiber bearing ovules of w...
ORGANISM(S): Gossypium hirsutum 
2013-06-14 | E-GEOD-38490 | biostudies-arrayexpress
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