21 Results
Show all Save search Copy queryShow results for
Organisms
Repository
Instrument Platform
Publication Date
Release Date
A collection of MS/MS data 112 microbial species. #BiodiversityLibrary
ORGANISM(S): Pseudonocardia Sp. (ncbitaxon:60912) Bacillus Anthracis Str. Ames (ncbitaxon:198094) Caulobacter Crescentus Cb15 (ncbitaxon:190650) Opitutaceae Bacterium Tav5 (ncbitaxon:794903) Enterobacter Cloacae Scf1 (ncbitaxon:701347) Heliobacterium Modesticaldum (ncbitaxon:35701) Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. 14028s (ncbitaxon:588858) Bacillus Subtilis Subsp. Subtilis Str. 168 (ncbitaxon:224308) Shewanella Sp. Ana-3 (ncbitaxon:94122) Sinorhizobium Meliloti 1021 (ncbitaxon:266834) Cyanothece Sp. Atcc 51142 (ncbitaxon:43989) Escherichia Coli Bl21 (ncbitaxon:511693) Diplosphaera Colitermitum Tav2 (ncbitaxon:278957) Anaplasma Phagocytophilum (ncbitaxon:948) Chloroflexus Aurantiacus (ncbitaxon:1108) Yersinia Pestis Co92 (ncbitaxon:214092) Yersinia Pseudotuberculosis Ip 32953 (ncbitaxon:273123) Syntrophobacter Fumaroxidans (ncbitaxon:119484) Saccharomonospora Viridis Dsm 43017 (ncbitaxon:471857) Brachybacterium Faecium Dsm 4810 (ncbitaxon:446465) Cenarchaeum Symbiosum (ncbitaxon:46770) Chloracidobacterium Thermophilum (ncbitaxon:458033) Acidiphilium Cryptum Jf-5 (ncbitaxon:349163) Geobacter Sulfurreducens Pca (ncbitaxon:243231) Nakamurella Multipartita Dsm 44233 (ncbitaxon:479431) Sulfolobus Acidocaldarius Dsm 639 (ncbitaxon:330779) Desulfovibrio Desulfuricans Nd132 (ncbitaxon:641491) Haloferax Volcanii (ncbitaxon:2246) Synechococcus Sp. Pcc 7002 (ncbitaxon:32049) Fibrobacter Succinogenes Subsp. Succinogenes S85 (ncbitaxon:59374) Sinorhizobium Medicae (ncbitaxon:110321) Deinococcus Radiodurans R1 (ncbitaxon:243230) Shewanella Sp. Mr-7 (ncbitaxon:60481) Cellulomonas Flavigena Dsm 20109 (ncbitaxon:446466) Mycobacterium Tuberculosis H37rv (ncbitaxon:83332) Chlorobaculum Tepidum (ncbitaxon:1097) Kosmotoga Olearia Tbf 19.5.1 (ncbitaxon:521045) Shewanella Frigidimarina Ncimb 400 (ncbitaxon:318167) Shewanella Putrefaciens 200 (ncbitaxon:399804) Prochlorococcus Marinus Subsp. Pastoris Str. Ccmp1986 (ncbitaxon:59919) Shewanella Baltica Os185 (ncbitaxon:402882) Hungateiclostridium Thermocellum (ncbitaxon:1515) Thiocapsa Marina (ncbitaxon:244573) Burkholderia Mallei (ncbitaxon:13373) Thermotoga Maritima (ncbitaxon:2336) Novosphingobium Aromaticivorans (ncbitaxon:48935) Arthrobacter Sp. Fb24 (ncbitaxon:290399) Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 (ncbitaxon:99287) Xylanimonas Cellulosilytica Dsm 15894 (ncbitaxon:446471) Halorhabdus Utahensis Dsm 12940 (ncbitaxon:519442) Yersinia Enterocolitica (ncbitaxon:630) Thermosynechococcus Elongatus Bp-1 (ncbitaxon:197221) Geobacter Bemidjiensis Bem (ncbitaxon:404380) Kineococcus Radiotolerans Srs30216 (ncbitaxon:266940) Shewanella Oneidensis Mr-1 (ncbitaxon:211586) Delta Proteobacterium Naphs2 (ncbitaxon:88274) Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882) Ralstonia Pickettii (ncbitaxon:329) Ehrlichia Chaffeensis (ncbitaxon:945) Rhodobacter Capsulatus Sb 1003 (ncbitaxon:272942) Escherichia Coli Str. K-12 Substr. Mg1655 (ncbitaxon:511145) Rhodobacter Sphaeroides 2.4.1 (ncbitaxon:272943) Halogeometricum Borinquense Dsm 11551 (ncbitaxon:469382) Anabaena Variabilis (ncbitaxon:1172) Bartonella Henselae Str. Houston-1 (ncbitaxon:283166) Dethiosulfovibrio Peptidovorans Dsm 11002 (ncbitaxon:469381) Synechocystis Sp. Pcc 6803 (ncbitaxon:1148) Shewanella Loihica Pv-4 (ncbitaxon:323850) Geobacter Metallireducens Gs-15 (ncbitaxon:269799) Shewanella Baltica Os195 (ncbitaxon:399599) Roseiflexus Castenholzii (ncbitaxon:120962) Opitutaceae Bacterium Tav1 (ncbitaxon:278956) Borrelia Burgdorferi B31 (ncbitaxon:224326) Pseudomonas Aeruginosa Pao1 (ncbitaxon:208964) Sanguibacter Keddieii Dsm 10542 (ncbitaxon:446469) Methanosarcina Barkeri (ncbitaxon:2208) Thermosynechococcus Sp. Nk55a Slackia Heliotrinireducens Dsm 20476 (ncbitaxon:471855) Cyanothece Sp. Pcc 7822 (ncbitaxon:497965) Thermobispora Bispora Dsm 43833 (ncbitaxon:469371) Rhodopseudomonas Palustris (ncbitaxon:1076) Cyanothece Sp. Pcc 8801 (ncbitaxon:41431) Cyanothece Sp. Pcc 7424 (ncbitaxon:65393) Desulfovibrio Desulfuricans (ncbitaxon:876) Escherichia Coli Rk4353 Shewanella Putrefaciens Cn-32 (ncbitaxon:319224) Yersinia Pestis Kim10+ (ncbitaxon:187410) Candidatus Pelagibacter Ubique Htcc1062 (ncbitaxon:335992) Methanospirillum Hungatei Jf-1 (ncbitaxon:323259) Cyanothece Sp. Atcc 51472 (ncbitaxon:860575) Shewanella Sp. W3-18-1 (ncbitaxon:351745) Stackebrandtia Nassauensis Dsm 44728 (ncbitaxon:446470) Cyanothece Sp. Pcc 8802 (ncbitaxon:395962) Cryptobacterium Curtum Dsm 15641 (ncbitaxon:469378) Shewanella Amazonensis Sb2b (ncbitaxon:326297) Nocardiopsis Dassonvillei Subsp. Dassonvillei Dsm 43111 (ncbitaxon:446468) Dehalococcoides Ethenogenes 195 (ncbitaxon:243164) Shewanella Denitrificans Os217 (ncbitaxon:318161) Anaeromyxobacter Dehalogenans (ncbitaxon:161493) Actinosynnema Mirum Dsm 43827 (ncbitaxon:446462) Shewanella Baltica Os223 (ncbitaxon:407976) Geobacter Uraniireducens (ncbitaxon:351604) Pseudomonas Fluorescens Pf0-1 (ncbitaxon:205922) Pelobacter Carbinolicus Dsm 2380 (ncbitaxon:338963) Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ty2 (ncbitaxon:209261) Bacillus Anthracis Str. Sterne (ncbitaxon:260799) Yersinia Pseudotuberculosis Pb1/+ (ncbitaxon:502801) Methylophilales Bacterium Htcc2181 (ncbitaxon:383631) Shewanella Sp. Mr-4 (ncbitaxon:60480) Shewanella Baltica Os155 (ncbitaxon:325240) Cyanothece Sp. Pcc 7425 (ncbitaxon:395961)
Not available
The Genetics of Type 2 Diabetes Consortium (GoT2D) is a collaboration between the University of Michigan, the Broad Institute and the Wellcome Trust Centre for Human Genetics. The overall aim is to extend upon recent efforts, such as genome-wide association studies (GWAS) and large scale meta-analys...
The GoT2D study includes ~2800 samples, half T2D cases and half T2D controls, of Northern European ancestry sequenced over 3 three technologies: deep whole exome sequencing, low-pass (4x) whole genome sequencing, and OMNI 2.5M genotyping. Samples were ascertained to be phenotypically "extreme" (e.g....
This data set includes the following summary level data file used for the imputation data: imputation.sv.assoc.txt: results from single variant association analysis in imputed samples
This data set includes the following summary level data files used for the 13k analysis of T2D-GENES data: wes.variants.list: list of variants to keep for any analysis of the exomes data wes.assoc.samples.list: list of samples to keep for association analysis wes.assoc.variants.list: list of variant...
This data set includes the following summary level data files used for the GoT2D WGS analysis: wgs.assoc.samples.list: list of samples to keep for association analysis wgs.assoc.variants.list: list of variants to keep for association analysis wgs.sv.assoc.txt: single variant association results
This data set includes the following summary level data file used for the exome chip analysis: exome_chip.sv.assoc.txt: results from single variant association analysis in exome chip
The T2D-GENES/GoT2D 13K exome sequencing study includes ~13,000 samples, half T2D cases and half T2D controls, from five ancestries (~5K Europeans, ~2K each of African-American, East-Asian, South-Asian, and Hispanic). Samples underwent deep exome sequencing, with SNVs and INDEls called according to ...