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TranscriptomicsTranscription profiling of Arabidopsis seed compartments at the mature green stage.
We collected mature green seed compartments from 7 micron paraffin sections using the Leica LMD6000 system in order to identify the mRNAs present in different compartments from seeds containing mature green-stage embryos. For the purposes of this study we captured 6 compartments: embryo proper, micr...
ORGANISM(S): Arabidopsis thaliana 
2009-03-21 | E-GEOD-15165 | biostudies-arrayexpress
MetabolomicsOverexpression of Brassica napus COMT1 in Arabidopsis heightens UV-B-mediated resistance to Plutella xylostella herbivory

UV-B radiation regulates numerous morphogenic, biochemical and physiological responses in plants, and can stimulate some responses typically associated with other abiotic and biotic stimuli, including invertebrate herbivory. Removal of UV-B from the growing environment of various plant species ha...

2023-08-14 | MTBLS8236 | MetaboLights
ProteomicsComplete integration of carbene-transfer chemistry into biosynthesis
Biosynthesis is an environmentally friendly and renewable way to synthesize a broad range of natural and some new-to-nature products; however, it lacks many of the reactions and flexibility of synthetic chemistry, an example being carbene mediated reactions. While it was recently shown that these re...
ORGANISM(S): Streptomyces albus J1074 
2023-05-03 | PXD037509 | Pride
Streptomyces albus P450 Biosynthesis Carbene meidated reaction 
GenomicsDCC_R27_WGS_Runs.1 - samples
Raw lane level fastq files from Whole genome sequencing in support of ICGC PRAD-CA Variant calls
EGAD00001003909 | EGA
GenomicsDCC_R27_WGS_Runs.4 - samples
Raw lane level fastq files from Whole genome sequencing in support of ICGC PRAD-CA Variant calls
EGAD00001003975 | EGA
GenomicsDCC_R27_WGS_Runs.3 - samples
Raw lane level fastq files from Whole genome sequencing in support of ICGC PRAD-CA Variant calls
EGAD00001003957 | EGA
TranscriptomicsTranscription profiling of yeast treated with rapamycin in a 7-part time series
This experiment was a 7-part time series (or, 2x7 factorial design) examining the effect of rapamycin on gene expression in Saccharomyces cerevisiae. Treated and untreated cultures were compared at 0, 20, 40, 60, 120, 240, and 360 minutes. In the paper, expression ratios (mRNA) at each time point ...
ORGANISM(S): Saccharomyces cerevisiae 
2010-02-05 | E-TABM-639 | biostudies-arrayexpress
TranscriptomicsCoordinated regulation of polycomb group complexes through microRNAs in cancer
To determine the altered mRNA expression signatures upon overexpressing EZH2 regulated microRNAs in cancer. To identify EZH2 regulated microRNAs in cancer. Two-condition experiment: Each EZH2 microRNA was overexpressed and compared to a control RNA in BT549 breast cancer cells. In DU145 prostate can...
ORGANISM(S): Homo sapiens 
2011-10-20 | E-GEOD-26996 | biostudies-arrayexpress
UnknownBiomaterial bridges enable regeneration and re-entry of corticospinal tract axons into the caudal spinal cord after SCI: Association with recovery of forelimb function.
Not available
S-EPMC4523232 | biostudies-literature
TranscriptomicsTranscriptional profiling of abdominal adipose tissue in juvenile broiler chickens divergently selected for abdominal fatness or leanness
Chickens divergently selected for either high abdominal fat content (fat genotype) or low abdominal fat content (lean genotype) at SRA-INRA, France were used to profile abdominal adipose gene expression during juvenile development (1 to 11 weeks of age) and to identify differentially expressed genes...
ORGANISM(S): Gallus gallus 
2012-04-26 | E-GEOD-37585 | biostudies-arrayexpress
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