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TranscriptomicsTranscription profiling by array of mouse wild type and E-cadherin knockout embryonic stem cells grown with or without cytokine leukemia inhibitory factor
We previously observed that E-cadherin knockout embryonic stem cells do not differentiate in the absence of the cytokine leukemia inhibitory factor (LIF) (Soncin et al., 2009, Stem Cells 27 p2069-2080). This experiment was designed to compare the transcription profile of E-cadherin KO ES cells cultu...
ORGANISM(S): Mus musculus 
2011-06-19 | E-MEXP-2836 | biostudies-arrayexpress
GenomicsEP300 genomic binding analysis in MCF7 cells with E-cadherin inhibition using ChIP-seq
This experiment examines the genomic binding of EP300 in MCF7 breast cancer cells after E-cadherin inhibition. Using ChIP-seq, we identified EP300 binding sites in control (cAb-MCF7) and E-cadherin-inhibited (nAb-MCF7) cells. The goal was to understand how EP300's chromatin binding is altered and it...
ORGANISM(S): Homo sapiens 
2025-06-03 | E-MTAB-15109 | biostudies-arrayexpress
UnknownManaging a policy paradox? Responses to textual warning labels on E-cigarette advertisements among U.S. national samples of youth overall and adults who smoke or vape.
Not available
S-EPMC10923179 | biostudies-literature
TranscriptomicsComparative Expression Profiling of E. coli and S. aureus inoculated primary Mammary Gland Cells sampled from Cows with different genetic Predisposition for Somatic Cell Score
Establishment of an in vitro system to explore molecular mechanisms of mastitis susceptibility in cattle by comparative expression profiling of Escherichia coli and Staphylococcus aureus inoculated primary cells sampled from cows with different genetic predisposition for somatic cell score Primary b...
ORGANISM(S): Bos taurus 
2011-07-26 | E-GEOD-24560 | biostudies-arrayexpress
UnknownP120 catenin potentiates constitutive E-cadherin dimerization at the plasma membrane and regulates trans binding.
Not available
S-EPMC9308376 | biostudies-literature
TranscriptomicsTranscription profiling of Bos taurus mammary gland infected with E. coli or S. aureus to investigate response to pathogen invasion and identify general and pathogen-specific transcriptional profiles
Investigation of the bovine mammary gland response to Escherichia coli and Staphylococcus aureus infection. The aims of the study were to examine the dynamics of the mammary gland response to pathogen invasion and identify general and pathogen-specific transcriptional profiles. Individual udder qu...
ORGANISM(S): Bos taurus 
2011-05-01 | E-TABM-704 | biostudies-arrayexpress
TranscriptomicsComparative transcriptome analysis of a panel of Escherichia coli natural isolates
The link between phylogeny, gene expression and adaptation remains vague in bacteria. Here we compare the transcriptome of 16 E. coli stains isolated from various sources and spanning most common E. coli phylogroups (A, B1, B2, D, E and, F) and lifestyles. Total RNAs were extracted after growth of t...
ORGANISM(S): Escherichia coli 
2020-07-29 | E-MTAB-9036 | biostudies-arrayexpress
UnknownFast single atom imaging for optical lattice arrays.
Not available
S-EPMC11762994 | biostudies-literature
TranscriptomicsPRAME induced inhibition of retinoic acid receptor signaling-mediated differentiation - a possible target for ATRA response in AML without t(15;17)
Purpose: In acute myeloid leukemia (AML) without retinoic acid receptor (RAR) rearrangement the effect of all-trans retinoic acid (ATRA) is still poorly understood despite an association of NPM1 mutation and ATRA response. Recently, PRAME (preferentially expressed antigen in melanoma) has been shown...
ORGANISM(S): Homo sapiens 
2013-03-10 | E-GEOD-43258 | biostudies-arrayexpress
GenomicsFunctional link between Rad2 and Mediator
In this study, we generate genomic maps of Mediator, Rad2, Pol II, TBP and TFIIH, by ChIP coupled to next generation sequencing technology (ChIP-seq), in wild type strains from Saccharomyces cerevisiae. A related study involving ChIP-chip analysis of Rad2 occupany is also deposited at ArrayExpress ...
ORGANISM(S): Saccharomyces cerevisiae 
2013-12-01 | E-MTAB-1595 | biostudies-arrayexpress
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