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ProteomicsArabidopsis diurnal LFQ proteome and labelled phosphoproteome
Plant growth and survival depends to a large extent on the diurnal regulation of cellular processes. Although extensively studied at the transcript level, notably less is known about diurnal fluctuations at the protein level. Here, we report a high-resolution quantitative time-course of the Arabidop...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-12-18 | PXD007600 | Pride
Diurnal Phosphoproteome Arabidopsis Proteome 
TranscriptomicsTranscription profiling of Arabidopsis leaf blades sampled throughout development from meristematic to expanding to mature state at 10 different timepoints
Arabidopsis leaf blades were sampled throughout development from meristematic through expanding to mature state at 10 different timepoints. The transcript data can be compared to a kinematic and flowcytometric characterisation of the system.
ORGANISM(S): Arabidopsis thaliana 
2004-09-20 | E-MEXP-144 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of control and catalase-deficient Arabidopsis (Arabidopsis thaliana) plants
In plants, reactive oxygen species and, more particularly, hydrogen peroxide (H2O2) play a dual role as toxic by-products of normal cell metabolism and as regulatory molecules in stress perception and signal transduction. Peroxisomal catalases are an important sink for photorespiratory H2O2. Using A...
ORGANISM(S): Arabidopsis thaliana 
2005-10-11 | E-MEXP-449 | biostudies-arrayexpress
TranscriptomicsPleiotropic expression of endogenous genes upon fungus infection of wheat plants containing anti-fungal transgenes
Recent attempts to increase endogenous disease resistance of plants by overexpression of anti-fungal transgenes have shown a potential of this method. However, it has also been shown that such improvements are usually small. One of the obvious reasons for this low anti-fungal effect might be the reg...
ORGANISM(S): Triticum aestivum 
2010-06-08 | E-GEOD-22080 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis wild type, FIE- and MIA- loss-of-function mutants
Plants with genotypes wild type, FIE loss-of-function and MIA loss-of-function were compared. Plants were grown in growth chambers at 70% humidity and daily cycles of 16 h light and 8 h darkness at 21 C. Plant material used for the experiments was pooled from 10 plants. Siliques without withering fl...
ORGANISM(S): Arabidopsis thaliana 
2007-01-18 | E-ATMX-10 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis wild type and rbr1-cs plants
Wild-type and rbr1-cs plants were grown on MS plates for 3 days. RNA was extracted from both genotypes and hybridized to ATH1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-12-31 | E-TABM-1009 | biostudies-arrayexpress
TranscriptomicsExpression profiles of field-grown wheat expressing the Pm3 allele and null segregants
It has been demonstrated that wheat overexpressing Pm3b, an allele of the R gene Pm3, has enhanced resistance against powdery mildew under field conditions. A gene expression profile study using GeneChip® Wheat Genome Array was performed to obtain insights into the mode of action of Pm3b and to elu...
ORGANISM(S): Triticum aestivum 
2014-05-01 | E-GEOD-54260 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis slr1 mutant and wild type lateral root segments treated with auxin
Lateral root initiation was used as a model system to study the mechanisms behind auxin-induced cell division. Genome-wide transcriptional changes were monitored during the early steps of lateral root initiation. Inclusion of the dominant auxin signaling mutant solitary root1 (slr1) identified genes...
ORGANISM(S): Arabidopsis thaliana 
2007-07-13 | E-GEOD-3350 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis leaves and flowers labeled with three different kits and hybridized to AGRONOMICS1 arrays
RNA was labeled as technical replicates with three different kits and hybridized to AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-03-02 | E-TABM-870 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis etiolated seedlings, light-treated seedlings, leaves and flowers hybridized to ATH1 and AGRONOMICS1 arrays
RNA from etiolated seedlings, light-treated seedlings, leaves and flowers was hybridized to ATH1 and AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-01-01 | E-MEXP-2472 | biostudies-arrayexpress
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