Gu Yixin Y - OmicsDI

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Proteomics (2)
Unknown (1)
Metabolomics (1)

Organisms

Candida albicans (2)

Repository

pride (2)
MetaboLights (1)

Tissue

Eukaryotic cell (2)
Whole body (2)

Disease

Dentin caries (2)

Technology Type

Bottom-up proteomics (2)
Mass Spectrometry (2)
Mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (2)
2024 (1)

CHEBI ID

CHEBI:10565 (1)
CHEBI:1098 (1)
CHEBI:112106 (1)
CHEBI:1139 (1)
CHEBI:132125 (1)
CHEBI:132137 (1)
CHEBI:13714 (1)
CHEBI:14314 (1)
CHEBI:1506 (1)
CHEBI:15414 (1)
CHEBI:15427 (1)
CHEBI:15428 (1)
CHEBI:15582 (1)
CHEBI:15583 (1)
CHEBI:15591 (1)
CHEBI:15620 (1)
CHEBI:15694 (1)
CHEBI:15699 (1)
CHEBI:15710 (1)
CHEBI:15724 (1)
CHEBI:15739 (1)
CHEBI:15741 (1)
CHEBI:15756 (1)
CHEBI:15773 (1)
CHEBI:15781 (1)
CHEBI:15784 (1)
CHEBI:15805 (1)
CHEBI:15819 (1)
CHEBI:15824 (1)
CHEBI:15846 (1)

Metabolite Name

(-)-threo-Iso(homo)2-citrate (1)
(2-Amino-1-hydroxyethyl)phosphonate (1)
(2-Naphthyl)methanol (1)
(2R,3S)-2,3-Dimethylmalate (1)
(4R)-4-Hydroxy-2-oxoglutarate (1)
(4S)-4-Hydroxy-2-oxoglutarate (1)
(5-L-Glutamyl)-L-glutamate (1)
(9Z,12Z,15Z)-Octadecatrienoic acid (1)
(R)-(Homo)2-citrate (1)
(R)-2-Ethylmalate (1)
(R)-3-(Indol-3-yl)-2-oxobutyrate (1)
(R)-Lactate (1)
(R)-S-Lactoylglutathione (1)
(S)-1-Phenylethanol (1)
(S)-2-Aceto-2-hydroxybutanoate (1)
(S)-2-Aminobutanoate (1)
(S)-2-Phenyloxirane (1)
(S)-Autumnaline (1)
(S)-Lactate (1)
(S)-Malate (1)
(S)-Norcoclaurine (1)
(S)-beta-Tyrosine (1)
1,2,3,5-Tetrahydroxybenzene (1)
1,2,3-Trihydroxybenzene (1)
1,2-Bis(4-hydroxy-3-methoxyphenyl)ethylene (1)
1,7-Dimethylxanthine (1)
1-(3-Pyridinyl)-1,4-butanediol (1)
1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide (1)
1-Aminocyclopropane-1-carboxylate (1)
1-Methyladenosine (1)

Release Date

2020 (1)

Lab affiliation

State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China (lab head) (2)

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DNA nanomachines reveal an adaptive energy mode in confinement-induced amoeboid migration powered by polarized mitochondrial distribution

Energy metabolism is highly interdependent with adaptive cell migration in vivo. Mechanical confinement is a critical physical cue that induces switchable migration modes of the mesenchymal-to-amoeboid transition (MAT). However, the energy states in distinct migration modes, especially a...

2024-03-25 | MTBLS9657 | MetaboLights

Proteome profiling of Candida albicans

The complex ecological dynamics between Streptococcus mutans and Candida albicans within dental plaque biofilms play a pivotal role in the etiology of dental caries. To investigate the "contact-independent" interactions between these two species, we developed a transwell co-culture system. Utilizing...

ORGANISM(S): Candida albicans (Yeast)

2025-01-25 | PXD059152 | Pride

Ubiquitination proteome profiling of Candida albicans

Protein extraction The two groups (C, CS) were treated in same way, sample was first grinded with liquid nitrogen, then the powder was transferred to a 5-mL centrifuge tube and sonicated three times on ice using a high intensity ultrasonic processor (Scientz) in lysis buffer (including 1% TritonX-10...