Gu Z Z - OmicsDI

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Unknown (9698)
Proteomics (338)
Transcriptomics (68)
Metabolomics (52)
Genomics (45)
Multiomics (7)
Models (1)

Organisms

Homo sapiens (229)
Mus musculus (68)
Arabidopsis thaliana (16)
Rattus norvegicus (12)
Escherichia coli (9)
Oryza sativa (8)
Gallus gallus (5)
Sus scrofa domesticus (5)
Oryza sativa Japonica Group (4)
Drosophila melanogaster (3)
Clostridium ljungdahlii DSM 13528 (3)
Bombyx mori (2)
Equus caballus (2)
Dirofilaria immitis (1)
Schizosaccharomyces pombe 972h- (1)
Neurospora crassa (1)
Oryza sativa Indica Group (1)
Setaria italica (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Sus scrofa (1)
Drosophila simulans (1)
Drosophila yakuba (1)
Bifidobacterium bifidum (1)
Cucumis sativus (1)
Ganoderma lucidum G.260125-1 (1)
Mytilus coruscus (1)
Pyrus x bretschneideri (1)
Ziziphus jujuba var. spinosa (1)

Organisms

Caenorhabditis elegans (1)

Repository

pride (265)
biostudies-arrayexpress (80)
iProX (56)
MetaboLights (52)
EGA (30)
MassIVE (7)
jPOST (6)
PeptideAtlas (4)
ENA (2)
BioModels (1)
geo (1)

Tissue

Cell culture (53)
Liver (18)
Epithelial cell (17)
Blood plasma (15)
Whole body (10)
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Brain (8)
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Oocyte (6)
Heart (5)
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T cell (5)
Others (4)
Sperm (4)
Cell suspension culture (3)
Kidney (3)
Lung (3)
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Primary cell (3)
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Blood cell (2)
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Cerebrospinal fluid (2)
Eukaryotic cell (2)

Disease

Disease free (12)
Colon cancer (5)
Acute leukemia (4)
Breast cancer (4)
Cervix carcinoma (3)
Liver cancer (3)
Malignant neoplasm of ovary (3)
Brain disease (2)
Cardiovascular system disease (2)
Cervical adenocarcinoma (2)
Dentin caries (2)
Lung cancer (2)
Male infertility (2)
Parkinson's disease (2)
Primary immunodeficiency disease (2)
Prostate adenocarcinoma (2)
Alzheimer's disease (1)
Asthma (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Brain ischemia (1)
Bronchiolitis obliterans (1)
COVID-19 (1)
Chronic kidney disease (1)
Dementia (1)
Depression (1)
End stage renal disease (1)
Fever (1)
Hepatocellular carcinoma (1)
Polycystic Kidney (1)

Technology Type

Mass Spectrometry (265)
Shotgun proteomics (127)
Bottom-up proteomics (57)
Mass spectrometry (36)
Data-dependent acquisition (31)
Affinity purification coupled with mass spectrometry proteomics (21)
Mass spectrometry assay (15)
SWATH MS (15)
Gel-based experiment (13)
Data-independent acquisition (12)
Top-down proteomics (8)
Affinity proteomics (4)
Mass spectrometry imaging (3)
Proteogenomics (3)
All-ion fragmentation (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
HDMSE (2)
AB SOLiD System 3.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
NMR spectroscopy (1)
Immunopeptidomics (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (14)
Liquid Chromatography MS - positive - reverse phase (14)
Liquid Chromatography MS - positive - hilic (5)
Liquid Chromatography MS - positive - reverse-phase (5)
Liquid Chromatography MS - negative - reverse-phase (4)
MS:1000031 (3)
Gas Chromatography MS - positive - high-polarity (3)
Liquid Chromatography MS - (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 2000 (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
LTQ Orbitrap (1)
Orbitrap Eclipse (1)
Q Exactive (1)
Q Exactive Plus (1)
5975C Series GC/MSD (Agilent) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Bruker (1)
Diode array detection MS - alternating - reverse-phase (1)
Flow injection analysis MS - (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)

Publication Date

2025 (79)
2026 (60)
2022 (59)
2024 (55)
2023 (38)
2021 (30)
2013 (23)
2015 (18)
2016 (18)
2020 (17)
2018 (15)
2019 (12)
2014 (11)
2017 (10)
2011 (9)
2010 (9)
2012 (5)
2009 (1)
2006 (1)
2005 (1)
2007 (1)

UNIPROT ID/AC

A0A024R563 (4)
A0A0A0MSA7 (4)
A0MZ66 (4)
A5A3E0 (4)
A5YM69 (4)
A6ND36 (4)
A6NNZ2 (4)
B4DPR2 (4)
B4E3A4 (4)
B7Z2U2 (4)
B7Z9B7 (4)
B7ZME8 (4)
C9JM50 (4)
C9JSZ1 (4)
C9JZR2 (4)
D6RE86 (4)
E5RK69 (4)
E7ESL9 (4)
E7EVA0 (4)
E9PFZ2 (4)
E9PKC0 (4)
E9PRE2 (4)
H0Y2V6 (4)
H0Y5B0 (4)
H0Y5C6 (4)
H0YDQ8 (4)
H0YFY6 (4)
H0YM50 (4)
H7BXH2 (4)
H7BY16 (4)

ENSEMBL ID

ENSG00000170477 (4)
ENSG00000147251 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17351 (17)
CHEBI:15756 (14)
CHEBI:17568 (14)
CHEBI:16704 (13)
CHEBI:16737 (13)
CHEBI:17154 (13)
CHEBI:17368 (13)
CHEBI:17596 (13)
CHEBI:16015 (12)
CHEBI:16708 (12)
CHEBI:15727 (11)
CHEBI:16335 (11)
CHEBI:16347 (11)
CHEBI:16750 (11)
CHEBI:17203 (11)
CHEBI:17992 (11)
CHEBI:18089 (11)
CHEBI:18132 (11)
CHEBI:28044 (11)
CHEBI:28865 (11)
CHEBI:30769 (11)
CHEBI:15676 (10)
CHEBI:15741 (10)
CHEBI:15971 (10)
CHEBI:16196 (10)
CHEBI:16359 (10)
CHEBI:16467 (10)
CHEBI:16865 (10)
CHEBI:17015 (10)
CHEBI:17509 (10)

Metabolite Name

Creatinine (10)
L-Phenylalanine (10)
Adenosine (9)
Cytidine (9)
Glycerophosphocholine (9)
Hypoxanthine (9)
Inosine (9)
L-Glutamine (9)
Sucrose (9)
Uridine (9)
1-Methylhistidine (8)
Adenine (8)
Deoxycholic acid (8)
Guanosine (8)
L-Proline (8)
Linoleic acid (8)
Taurine (8)
Uracil (8)
Xanthosine (8)
D-Mannose (7)
L-Carnitine (7)
L-Glutamate (7)
L-Histidine (7)
L-Tyrosine (7)
Nicotinamide (7)
Palmitic acid (7)
Riboflavin (7)
Thymidine (7)
Allantoin (6)
Betaine (6)

First Public Date

2022 (1)
2014 (1)

Modelling Approach

Constraint-based model (1)

Lab affiliation

Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (15)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (8)
Beijing proteome research center (3)
Key Laboratory of Tropical Marine Bio-resources and Ecology,South China Sea Institute of Oceanology, Chinese Academy of Sciences (3)
Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
Third Military Medical University (3)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (2)
Center for Translational Medicine, The Affiliated Zhangjiagang Hospital of Soochow University, Suzhou Medical College of Soochow University (2)
Children's Hospital of Nanjing Medical University (2)
College of Fisheries, Huazhong Agricultural University (2)
Department of Clinical Laboratory, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China. The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (2)
Durbrain (2)
Fujian Agriculture and Forestry University (2)
Group Leader Cell&Developmental Biology John Innes Centre Norwich, UK (2)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
Nanjing Agricultural University (2)
No. 2 West Yuanmingyuan Road, Haidian District, Beijing (2)
Peking University First Hospital (2)
Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences (2)
South China Sea Institute of Oceanology, Chinese Academy of Sciences (2)
State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Ningbo University, Ningbo, Zhejiang 315211, China (2)
State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China (lab head) (2)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, Jiangsu,China. (2)
The Fifth Affiliated Hospital of Guangzhou Medical University (2)
Universidad Andrés Bello, Laboratorio de Patología de Organismos Acuáticos y Biotecnología Acuícola, Facultad de Ciencias de la Vida, Viña del Mar, Chile (2)
University of the Pacific (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
ABCT, The Hong Kong Polytechnic University (1)
BMC-C12, Rheumatology and Molecular Skeletal Biology Department of Clinical Sciences Lund, Lund University SE-22184 Lund, Sweden (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Study type

Transcription profiling by array (38)
RNA-seq of coding RNA (16)
ChIP-seq (7)
RNA-seq of non coding RNA (7)
Methylation profiling by high throughput sequencing (6)
Other (2)
Unknown experiment type (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)

Release Date

2025 (1558)
2022 (1345)
2023 (1269)
2024 (1129)
2021 (1036)
2020 (752)
2019 (538)
2018 (403)
2017 (363)
2016 (305)
2015 (261)
2026 (222)
2014 (158)
2013 (107)
2012 (92)
2011 (81)
2010 (56)
2009 (29)
2008 (20)
2007 (13)
2006 (8)
2005 (8)
2004 (7)
2003 (6)
2002 (4)
2001 (3)
1998 (3)
2000 (2)

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Z-ajoene from Crushed Garlic Alleviates Cancer-Induced Skeletal Muscle Atrophy.

Not available

S-EPMC6893518 | biostudies-literature

Photocatalytic Z/E isomerization unlocking the stereodivergent construction of axially chiral alkene frameworks.

Not available

S-EPMC11021481 | biostudies-literature

A role for Z-DNA binding in vaccinia virus pathogenesis.

Not available

S-EPMC165815 | biostudies-literature

Lee2010 - Genome-scale metabolic network of Zymomonas mobilis (iZmobMBEL601)

Lee2010 - Genome-scale metabolic network of Zymomonas mobilis (iZmobMBEL601) This model is described in the article: The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies...

2015-07-30 | MODEL1507180031 | BioModels

Based on the Metabolomic Approach the Energy Metabolism Responses of Oriental River Prawn Macrobrachium nipponense Hepatopancreas to Acute Hypoxia and Reoxygenation

Hypoxia represents a major physiological challenge for prawns and is a problem in aquaculture. Therefore, an understanding of the metabolic response mechanism of economically important prawn species to hypoxia and re-oxygenation is essential. However, little is known about the intrinsic mechanisms b...

2021-05-17 | MTBLS584 | MetaboLights

Dichotomy of Dosage Compensation along the Neo Z Chromosome of the Monarch Butterfly.

Not available

S-EPMC6901105 | biostudies-literature

Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection.

Not available

S-EPMC341766 | biostudies-literature

Conserved Patterns of Sex Chromosome Dosage Compensation in the Lepidoptera (WZ/ZZ): Insights from a Moth Neo-Z Chromosome.

Not available

S-EPMC5381563 | biostudies-literature

Cell-Laden Gelatin Methacryloyl Bioink for the Fabrication of Z-Stacked Hydrogel Scaffolds for Tissue Engineering.

Not available