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TranscriptomicsProteogenomics characterization of BN-Lx and SHR liver samples
Characterization of transcriptome and proteome difference between BN-Lx and SHR Liver samples of laboratory rats
ORGANISM(S): Rattus norvegicus 
2013-08-31 | E-MTAB-1666 | biostudies-arrayexpress
TranscriptomicsAssessing genome instability in Bloom syndrome
Strand-seq single cell sequencing and bulk RNA-seq was performed on human and mouse samples with defect and wildtype Blm gene
ORGANISM(S): Mus musculus 
2018-01-26 | E-MTAB-5976 | biostudies-arrayexpress
TranscriptomicsRat_RNASeq_WBrain_BNLx_SHR
Whole brain RNA sequencing of BN-Lx/Cub, SHR/OlaIpcv and their hybrids
ORGANISM(S): Rattus norvegicus 
2012-04-04 | E-MTAB-1070 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by high throughput sequencing of liver from SHR/OlaIpcv and BN-Lx/Cub rats (SOLiD 4 paired-end)
Liver RNA sequencing of BN-Lx/Cub, SHR/OlaIpcv
ORGANISM(S): Rattus norvegicus 
2012-04-04 | E-MTAB-1069 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling of tdTomato+ CGNPs from cerebellum of Math1-CreERT2 transgenic mice
Fluorescent cerebella were subsequently dissected at E15.5, E17.5, P0 (day of birth), P7 (postnatal day 7), P14 and P30; and tdTomato+ CGNPs were purified using fluorescence activated cell sorting (FACS). From these samples, we generated transcriptomes using RNA-seq
ORGANISM(S): Mus musculus 
2022-09-25 | E-MTAB-7399 | biostudies-arrayexpress
GenomicsExome sequencing of p53/Mps1 murine tumours
To investigate karyotype heterogeneity in tumours exhibiting chromosomal instability, we sequenced exomes of Mps1f/f; p53f/f; Lck-Cre+ and Mps1f/f; p53f/+; Lck-Cre+ mice,
ORGANISM(S): Mus musculus 
2016-04-27 | E-MTAB-4181 | biostudies-arrayexpress
TranscriptomicsProfiling of chromatin deposition bias in RPE-1 cells using Double-click-seq and SCAR-seq
We used double-click-seq and SCAR-seq methods to profile chromatin deposition bias in RPE-1 cells. Untreated cells and treatments promoting G4 formation (hydroxyurea, NMM) and their combination were profiled for characterizing chromatin protein redistribution asymmetry during DNA replication. This i...
ORGANISM(S): Homo sapiens 
2025-08-31 | E-MTAB-13346 | biostudies-arrayexpress
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