Haas S S - OmicsDI

Show results for

Unknown (2014)
Proteomics (94)
Transcriptomics (70)
Genomics (26)
Metabolomics (4)
Other (1)
Multiomics (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (84)
Alteromonadales (84)
Bacteria (84)
Canis lupus familiaris (84)
Carya cathayensis (84)
Ectopseudomonas oleovorans CECT 5344 (84)
Ensifer adhaerens (84)
Homo sapiens (52)
Mus musculus (20)
Aspergillus fumigatus (4)
Corynebacterium glutamicum ATCC 13032 (2)
Rattus norvegicus (2)
Calanus glacialis (1)
Clostridioides difficile 630 (1)
Calanus hyperboreus (1)
Hippoglossoides platessoides (1)
Mallotus villosus (1)
Polypterus senegalus (1)
Methylocystis sp. SB2 (1)
Fusarium oxysporum (1)
Calanus finmarchicus (1)
Allium cepa (1)
Burkholderia lata (1)
Notophthalmus viridescens (1)
Ambystoma mexicanum (1)
Mytilus edulis (1)
Lolium perenne (1)
Aspergillus fumigatus Af293 (1)
Pseudomonas aeruginosa PAO1 (1)
Drosophila melanogaster (1)

Repository

pride (84)
biostudies-arrayexpress (73)
EGA (25)
MassIVE (8)
MetaboLights (4)
GPMDB (1)

Tissue

Cell culture (18)
Epithelial cell (12)
Bone marrow (5)
Kidney (5)
B cell (4)
Blood (4)
Blood cell (4)
Colon (4)
Fibroblast (4)
Cell suspension culture (3)
Hyphal cell (3)
Liver (3)
Pancreas (3)
Brain (2)
Cell line cell (2)
Colonic epithelium (2)
Heart (2)
Lung (2)
Monocyte (2)
Permanent cell line cell (2)
Primary cell (2)
Prostate cancer cell (2)
Testis (2)
Astrocyte (1)
Blood cancer cell (1)
Blood plasma (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
T cell (1)

Disease

Colon cancer (6)
Disease free (5)
Avian influenza (3)
Breast cancer (3)
Influenza (3)
Lymphoma (2)
Multiple myeloma (2)
Pancreatic ductal adenocarcinoma (2)
Normal (1)
Neuroblastoma (1)
Not Available (1)
Acute leukemia (1)
Esophageal cancer (1)
Glioblastoma (1)
Hepatocellular carcinoma (1)
Immunoglobulin light chain amyloidosis (1)
Kidney cancer (1)
Lung adenocarcinoma (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Melanomatosis (1)
Pancreas adenocarcinoma (1)
Pancreatic cancer (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Renal carcinoma (1)
Renal cell carcinoma (1)

Technology Type

Mass Spectrometry (84)
Shotgun proteomics (46)
Bottom-up proteomics (14)
Data-dependent acquisition (13)
Affinity purification coupled with mass spectrometry proteomics (12)
Gel-based experiment (7)
Mass spectrometry (4)
Data-independent acquisition (4)
Top-down proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
SRM/MRM (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0- (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina HiSeq 2500 (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (9)
Illumina HiSeq 2000 (3)
Orbitrap Fusion (3)
Orbitrap Fusion Lumos (3)
Q Exactive (3)
TruSeq RNA Sample Preparation protocol (2)
Illumina HiSeq 1500 (2)
Illumina HiSeq 2500 (2)
LTQ Orbitrap Discovery (Thermo Scientific) (2)
GeneChip Scanner 2500 (1)
TruSeq RNA Sample Preparation Kit (Illumina) (1)
Rneasy Plant Mini Kit (Qiagen) (1)
- (1)
Illumina MiSeq (1)
NextSeq 500 (1)
Instrument (1)
Exactive Plus (1)
LTQ Orbitrap Velos (1)
Q Exactive HF-X (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2024 (20)
2015 (19)
2022 (18)
2021 (13)
2019 (12)
2023 (10)
2020 (10)
2014 (10)
2013 (8)
2026 (8)
2025 (7)
2016 (6)
2011 (6)
2010 (6)
2018 (5)
2012 (3)
2009 (2)
2007 (2)
2008 (1)
2005 (1)
2017 (1)

CHEBI ID

CHEBI:77065 (2)
CHEBI:16027 (2)
CHEBI:17596 (2)
CHEBI:219654 (1)
CHEBI:80074 (1)
CHEBI:6820 (1)
CHEBI:185794 (1)
CHEBI:81175 (1)
CHEBI:21167 (1)
CHEBI:74619 (1)
CHEBI:28636 (1)
CHEBI:190269 (1)
CHEBI:2494 (1)
CHEBI:28055 (1)
CHEBI:157672 (1)
CHEBI:90765 (1)
CHEBI:18320 (1)
CHEBI:33117 (1)
CHEBI:71616 (1)
CHEBI:83498 (1)
CHEBI:134543 (1)
CHEBI:89454 (1)
CHEBI:81015 (1)
CHEBI:16652 (1)
CHEBI:66869 (1)
CHEBI:30923 (1)
CHEBI:189976 (1)
CHEBI:174173 (1)
CHEBI:4784 (1)
CHEBI:16208 (1)

Metabolite Name

Tetrocarcin A (1)
Akeboside Ste (1)
GDP-Hexose (1)
UDPAG (1)
GDP-hexose (1)
Uridine-diphosphate (1)
Cytidine diphosphate (1)
Thymidylic acid (1)
Cytidylic acid (1)
Guanylate (1)
5'-adenylic acid (1)
Aclarubicin (1)
Aeruginopeptin 228A (1)
ADP-D-ribose (1)
UDP-glucuronic acid (1)
Adenosine diphosphate (1)
Alliosterol 1-rhamnoside 16-galactoside (1)
Uridine triphosphate (1)
Pristanate (1)
Phytanate (1)
Phenylalanylhydroxyproline* (1)
Glucoheptose (1)
DTT (1)
Chlorthalidone (1)
Bromine (1)
2,2'-Methylenebis(6-tert-butyl-p-cresol) (1)
Bilirubin (1)
7-methylurate (1)
7-HOCA (1)
Glutathione oxidized (1)

Study type

Transcription profiling by array (33)
RNA-seq of coding RNA (22)
RNA-seq of non coding RNA (5)
Other (3)
Unknown experiment type (2)
Proteomic profiling by array (2)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (243)
2021 (208)
2023 (200)
2024 (185)
2025 (185)
2020 (173)
2019 (110)
2018 (108)
2016 (102)
2017 (97)
2015 (79)
2013 (76)
2014 (64)
2012 (48)
2011 (40)
2010 (37)
2026 (32)
2009 (31)
2008 (17)
2007 (12)
2005 (9)
2006 (9)
2001 (5)
2004 (4)
2003 (4)
1999 (3)
2002 (2)
2000 (2)
1998 (2)

Lab affiliation

Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (12)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (5)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (5)
AmsterdamUMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, The Netherlands (2)
Cambridge Institute for Medical Research, University of Cambridge (2)
Dept. Cellular Molecular Pharmacology, University of California - San Francisco (UCSF), USA (2)
Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA (2)
3 Division of Molecular Genetics, Netherlands Cancer Institute, Amsterdam, The Netherlands (1)
Anatomic Pathology, mayo clinic (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences , Utrecht University, 3584 CH Utrecht, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Utrecht, The Netherlands and Netherlands Proteomics Center, Utrecht, The Netherlands (1)
Cambridge Institute for Medical Research, University of Cambridge, CB2 0XY, UK (1)
Centre of Molecular Biology University Heidelberg Im Neuenheimer Feld 282 D-69120 Heidelberg Germany (1)
Consultant Pathology; Department of Laboratory Medicine (1)
Core Unit Proteomics, Berlin Institute of Health at Charité-Universitätsmedizin Berlin and Max-Delbrück-Center for Molecular Medicine, 13125 Berlin, Germany (1)
Department of Environmental and Global Health, College of Public Health and Health Profession, University of Florida, Gainesville, FL (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology (Leibniz-HKI), Jena, Germany (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena (1)
Department of Neurology and Neurooncology Program of the National Center for Tumor Diseases, Heidelberg University Hospital, Germany (1)
Department of Structural Biology, Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (1)
Dept. Cellular Molecular Pharmacology, University of San Francisco (UCSF), USA (1)
Dept. Cellular and Molecular Pharmacology, University of California - San Francisco (UCSF), USA (1)
EMBL (1)
Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Experimental Neurology, University Hospital, Frankfurt am Main, Germany (1)
Fred Hutch Cancer Center, Human Biology Division (1)
Genome Biology Unit, EMBL Heidelberg (1)
German Cancer Research Center (DKFZ) Clinical Cooperation Unit (CCE) Neurooncology (1)
German Cancer Research Center (DKFZ), Heidelberg, Germany Functional Proteome Analysis (1)