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TranscriptomicsExpression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies
The aim of this study was to identify eQTL in Brassica rapa grown under altered soil phosphorus (P) supply, to understand better the genetic architecture of P-use efficiency (PUE) in plants. Recombinant inbred lines (RILs) of the BraIRRI mapping population were grown at adequate and growth-limiting ...
ORGANISM(S): Brassica rapa 
2011-06-29 | E-GEOD-27052 | biostudies-arrayexpress
TranscriptomicsAnalysis of Ripening-related Gene Expression in Papaya using an Arabidopsis-based Microarray
Background: Papaya (Carica papaya L.) is a commercially important crop that produces climacteric fruits with a soft and sweet pulp that contain a wide range of health promoting phytochemicals. Despite its importance, little is known about transcriptional modifications during fruit ripening and its c...
ORGANISM(S): Carica papaya 
2012-05-24 | E-GEOD-38105 | biostudies-arrayexpress
TranscriptomicsEvaluation of the Affymetrix Brassica Exon 1.0 ST array
The aim of the experiment was to evaluate the performance of the Affymetrix Brassica Exon 1.0 ST array. Root and leaf samples from Brassica rapa line R-O-18 were compared. The same RNA samples were hybridised to the Agilent Brassica array, to compare the performance of the two arrays. 6 samples were...
ORGANISM(S): Brassica rapa 
2010-09-10 | E-GEOD-23141 | biostudies-arrayexpress
TranscriptomicsHeterologous microarrays for the study of drought stress in Musa
'Systems-wide' approaches such as microarray RNA-profiling are ideally suited to the study of the complex, overlapping responses of plants to biotic and abiotic stresses. However, commercial microarrays are only available for a limited number of plant species and development costs are so substantial...
ORGANISM(S): Musa sp. 
2009-07-04 | E-GEOD-16865 | biostudies-arrayexpress
TranscriptomicsComparison of root and leaf samples from Brassica rapa
Root and leaf samples from Brassica rapa line R-O-18 were compared. The results will be compared to the same samples hybridised to the Affymetrix Brassica Exon 1.0 ST array. 6 samples were hybridised. Triplcate samples of 11 day old roots and 2 semi-expanded leaves from 23 day old Brassica rapoa R-O...
ORGANISM(S): Brassica rapa 
2010-09-10 | E-GEOD-23409 | biostudies-arrayexpress
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