Han Han H - OmicsDI

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Unknown (24519)
Proteomics (514)
Transcriptomics (408)
Genomics (127)
Metabolomics (94)
Models (4)
Multiomics (4)
Genomic (2)
Other (2)

Organisms

Homo sapiens (277)
Mus musculus (156)
Rattus norvegicus (37)
Caenorhabditis elegans (31)
Arabidopsis thaliana (22)
Gallus gallus (10)
Zea mays (9)
Oryza sativa (7)
Marmota monax (5)
Aspergillus niger (5)
Danio rerio (5)
Drosophila melanogaster (5)
Saccharomyces cerevisiae (4)
Haloarcula hispanica (3)
Haloferax mediterranei (3)
Populus tremula x Populus alba (3)
Bos taurus (3)
Dichelobacter nodosus (2)
Nannochloropsis oceanica (2)
Helicobacter pylori 26695 (2)
Solanum pimpinellifolium (2)
Macaca mulatta (2)
Streptococcus suis (2)
Oryza sativa Japonica Group (2)
Pseudomonas aeruginosa (2)
Rattus (1)
Spalax carmeli (1)
Coccinella septempunctata (1)
Nannospalax galili (1)
Metallosphaera sedula DSM 5348 (1)

Organisms

Rattus norvegicus (4)
Mus musculus (4)
Homo sapiens (2)
Ovis aries (1)

Repository

biostudies-arrayexpress (454)
pride (357)
iProX (125)
MetaboLights (93)
EGA (60)
ENA (18)
MassIVE (13)
jPOST (9)
PeptideAtlas (7)
geo (5)
BioModels (4)
dbGaP (2)
EVA (1)
GNPS (1)
GPMDB (1)
PanoramaPublic (1)

Tissue

Cell culture (79)
Brain (38)
Epithelial cell (29)
Liver (13)
Plant cell (12)
Blood plasma (12)
Heart (10)
Oocyte (9)
Early embryonic cell (8)
Cell suspension culture (8)
Stem cell (8)
Whole body (8)
Root (7)
Testis (7)
Leaf (7)
Blood (7)
Embryo (6)
Kidney (6)
Blood serum (5)
Fibroblast (5)
Macrophage (4)
Lung (4)
Blood cell (4)
Others (3)
Pitcher secretion (3)
Breast (3)
Embryonic stem cell (3)
Skin (3)
Neuron (3)
Brain (2)

Disease

Disease free (17)
Alzheimer's disease (9)
Breast cancer (7)
Colon cancer (4)
Acute leukemia (4)
Stomach cancer (3)
Cervical cancer (3)
Type 2 diabetes mellitus (3)
Bladder transitional cell carcinoma (3)
Craniopharyngioma (2)
Brain disease (2)
Myopia (2)
Pancreatic cancer (2)
Chronic kidney disease (2)
Malignant neoplasm of ovary (2)
Papillary renal cell carcinoma (1)
Colorectal cancer recurrence-free (1)
Normal (1)
Not Available (1)
Multidrug-resistant tuberculosis (1)
Beta thalassemia (1)
Breast secretory carcinoma (1)
Limb ischemia (1)
Adrenal cortical adenocarcinoma (1)
Obsessive-compulsive disorder (1)
Pancreatic carcinoma (1)
Cataract (1)
Exfoliation syndrome (1)
Kabuki syndrome (1)
Thyroid cancer (1)

Technology Type

Mass Spectrometry (357)
Shotgun proteomics (203)
Mass spectrometry (74)
Bottom-up proteomics (56)
Data-dependent acquisition (36)
Affinity purification coupled with mass spectrometry proteomics (34)
Gel-based experiment (26)
Data-independent acquisition (14)
Mass spectrometry assay (12)
Top-down proteomics (12)
SWATH MS (8)
NMR spectroscopy (7)
SRM/MRM (7)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
Proteogenomics (3)
MSE (3)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina OMNIExpress, Affymetrix_6.0, HanChinese_Immunochip (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
AB SOLiD System 3.0 (1)
AB SOLiD 4 System (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)
Mass spectrometry imaging (1)
All-ion fragmentation (1)
DiaPASEF (1)

Instrument Platform

Illumina HiSeq 2500 (9)
Illumina HiSeq 2000 (8)
Illumina NovaSeq 6000 (7)
Illumina HiSeq 4000 (5)
Q Exactive (5)
LTQ Orbitrap Elite (4)
Q Exactive Plus (3)
GeneChip Instrument System (2)
Affymetrix mouse gene 1.0 ST arrays (2)
Agilent 2100 Bioanalyzer (2)
Illumina Genome Analyzer (2)
Illumina Genome Analyzer II (2)
TimsTOF Pro (2)
Orbitrap Fusion Lumos (2)
Illumina HiSeq 2000 platform (1)
KAPA RNA HyperPrep Kit (1)
Microbeads (1)
Trimmomatic 0.32; Bowtie 2.2.3 (1)
Affymetrix GeneChip Scanner 3000 7G (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Illumina NovaSeq X (1)
RNeasy Mini Kit (1)
N/a (1)
Illumina HiSeq 1500 (1)
NextSeq 500 (1)
Unspecified (1)
Instrument (1)
Q Exactive HF-X (1)
Orbitrap Exploris 240 (1)

Publication Date

2025 (87)
2022 (86)
2021 (76)
2024 (71)
2014 (65)
2011 (65)
2013 (62)
2023 (61)
2026 (58)
2012 (53)
2015 (52)
2010 (52)
2019 (46)
2020 (41)
2016 (34)
2018 (25)
2017 (22)
2008 (21)
2007 (20)
2009 (18)
2006 (3)
2005 (1)

UNIPROT ID/AC

Q9NY35 (5)
Q6UUV9 (5)
Q6PUV4 (5)
Q9Y6U3 (5)
Q9NVH6 (5)
Q9NRS6 (5)
Q63HM9 (5)
Q9Y4G8 (5)
Q9Y4D8-5 (5)
Q9P227 (5)
Q9NYI0 (5)
Q9NQ66-2 (5)
Q9NQ66 (5)
Q9H6U6 (5)
Q92823-4 (5)
Q92823 (5)
Q13938 (5)
Q9Y6K9 (5)
Q9Y2H0-3 (5)
Q9Y2H0 (5)
Q9UPT6 (5)
Q9UPQ3 (5)
Q9ULC3 (5)
Q9UK22 (5)
Q9UIW2 (5)
Q9NV96 (5)
Q9H2X9-2 (5)
Q9H2X9 (5)
Q9H0Q0 (5)
Q9H019 (5)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000147251 (3)
ENSG00000247315 (3)
ENSMUSP00000140201 (1)
ENSMUSP00000141542 (1)
ENSMUSG00000090272 (1)
ENSMUSP00000141637 (1)
ENSMUSG00000027651 (1)
ENSMUSG00000021039 (1)
ENSMUSP00000141097 (1)
ENSMUSG00000098557 (1)

CHEBI ID

CHEBI:30769 (31)
CHEBI:15741 (27)
CHEBI:17368 (27)
CHEBI:16704 (26)
CHEBI:17596 (25)
CHEBI:16919 (25)
CHEBI:15891 (24)
CHEBI:15354 (24)
CHEBI:16737 (24)
CHEBI:32816 (23)
CHEBI:17895 (22)
CHEBI:16828 (22)
CHEBI:16015 (22)
CHEBI:7916 (22)
CHEBI:18012 (22)
CHEBI:15756 (22)
CHEBI:17568 (22)
CHEBI:17154 (22)
CHEBI:17351 (21)
CHEBI:15428 (21)
CHEBI:16414 (20)
CHEBI:28044 (20)
CHEBI:17295 (19)
CHEBI:17203 (19)
CHEBI:16335 (19)
CHEBI:16196 (18)
CHEBI:15971 (18)
CHEBI:16750 (18)
CHEBI:16708 (18)
CHEBI:29108 (1)

Metabolite Name

Choline (22)
Hypoxanthine (21)
Creatinine (21)
Uridine (21)
Creatine (19)
Betaine (16)
Uracil (16)
Taurine (16)
Cytosine (15)
L-Tryptophan (14)
Adenosine (14)
Adenine (14)
Glycine (14)
L-Histidine (14)
Xanthine (14)
Valine (13)
L-Tyrosine (13)
Guanosine (13)
Guanine (12)
Niacinamide (12)
L-Proline (12)
L-Arginine (12)
Inosine (12)
Nicotinamide (11)
Methionine (11)
Urocanic acid (11)
Sphinganine (11)
Alanine (11)
Glycerophosphocholine (11)
Threonine (11)

First Public Date

2014 (7)
2025 (2)
2023 (2)
2022 (2)
2019 (2)
2024 (1)
2021 (1)
2018 (1)

Modelling Approach

Ordinary differential equation model (4)

Lab affiliation

Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (20)
Proteomics core facility, Seoul National University Hospital (4)
St Jude Children's Research Hospital (4)
Hangzhou Medical College (3)
School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, Guangdong, China (3)
Proteomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (3)
Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea (3)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (3)
Tianjin Medical University (3)
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China (2)
Department of Life Sciences, Korea University, Seoul 02841, Republic of Korea (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB) (2)
State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, China (2)
lanzhou university (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
Institute of Systems Biology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia. (2)
Mayo Clinic, Department of Oncology (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing 211166, China (2)
Nanjing Medical University (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
Departments of Biomedical Sciences, Seoul National University, Seoul, Korea (2)
Southwest University (2)
Proteomics and Metabolomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (2)
China agricultural university, preventive veterinary medicine (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (2)
Westlake University (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Department of Histology and Embryology, Gusu School, Nanjing Medical University (2)
Experimental Radiation Oncology, MD Anderson Cancer Center, Houston, TX, USA (2)

IsPrivate

False (4)

Submitter Keywords

TransQST (1)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
4x(2)H labeled dimethylated L-lysine (1)
N6-dimethyl-L-lysine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (265)
RNA-seq of coding RNA (68)
ChIP-seq (40)
RNA-seq of non coding RNA (20)
Comparative genomic hybridization by array (9)
Unknown experiment type (8)
Methylation profiling by array (8)
RNA-seq of coding RNA from single cells (7)
Other (6)
Methylation profiling by high throughput sequencing (6)
Proteomic profiling by array (3)
ChIP-chip by tiling array (2)
Genotyping by array (2)
Transcription profiling by MPSS (1)
Animal - Single-cell sequencing (1)
Plant - High-throughput sequencing (1)
Cell line - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
RIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2025 (3507)
2022 (3205)
2023 (2970)
2024 (2718)
2021 (2569)
2020 (1905)
2019 (1455)
2018 (1202)
2017 (1056)
2016 (891)
2015 (742)
2014 (595)
2026 (495)
2013 (430)
2012 (304)
2011 (294)
2010 (223)
2009 (158)
2008 (118)
2007 (56)
2006 (27)
2005 (18)
2004 (11)
2003 (8)
2002 (8)
1998 (3)
2001 (2)
2000 (1)
1997 (1)

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Transcription repressor HANABA TARANU (HAN) controls flower development via integrating multiple hormone actions, floral organ specification and GATA3 family auto-regulation

Plant inflorescence meristems and floral meristems possess specific boundary domains that result in floral organ separation, and in proper numbers of floral organs. HANABA TARANU (HAN) encodes a boundary-expressing GATA type zinc finger transcription factor that regulates shoot apical meristem organ...

ORGANISM(S): Arabidopsis thaliana

2013-09-01 | E-GEOD-38658 | biostudies-arrayexpress

Expression data from human cell line infected by human cytomegalovirus with over-expression lncRNA

RNA2.7 is a long non-coding RNA encoded by HCMV, which has be reported related with apoptosis. We have found RNA2.7 can also affect virus replication. We used the microarrays to look for HCMV RNA2.7 related host transcripts. We infected HELF cells by HCMV BAC HAN which was contructed from a HCMV cli...

ORGANISM(S): Homo sapiens

2016-03-01 | E-GEOD-73954 | biostudies-arrayexpress

Comparison of the performance of two commercial genome-wide association study genotyping platforms in Han Chinese Samples

Affymetrix 6.0, Illumina OMNIExpress, and llumina Immunochip genotype data for Han Chinese population including rheumatoid arthritis cases and controls. Data is in PLINK binary format. Illumina genotype clustering was performed using Illuminaâ€™s BeadStudio software. SNPs were reclustered using the ...

EGAS00000000131 | EGA

Association between Common Genetic Variants and Polycystic Ovary Syndrome Risk in a Chinese Han Population.

Not available

S-EPMC5197998 | biostudies-literature

Expression data from coronary heart disease in Chinese Han people

The genetics, social, cultural and environmental factors pose a great challenge for the diagnosis and treatment of coronary heart disease among different racial groups. We aimed to identify the differentially expressed genes involved in coronary heart disease in Chinese Han people as an aid for scre...

ORGANISM(S): Homo sapiens

2015-07-23 | E-GEOD-71226 | biostudies-arrayexpress

HanChinese_Immunochip - samples

Han Chinese samples using Immunochip

EGAD00010000425 | EGA

HanChinese_Affymetrix_Controls - samples

Han Chinese samples using Affymetrix (controls)

EGAD00010000421 | EGA

HanChinese_Affymetrix_Cases - samples

Han Chinese samples using Affymetrix (cases)

EGAD00010000419 | EGA

HanChinese_OMNIExpress_Cases - samples