Han Xu X - OmicsDI

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Unknown (4905)
Proteomics (90)
Transcriptomics (36)
Genomics (30)
Metabolomics (20)
Multiomics (3)
Other (1)

Organisms

Homo sapiens (63)
Andropogon gerardi (40)
Bacteria (40)
Bartonella quintana JK 31 (40)
Canis lupus familiaris (40)
Clavibacter nebraskensis NCPPB 2581 (40)
Cnidaria (40)
Ensifer adhaerens (40)
Halictus scabiosae (40)
Human alphaherpesvirus 1 strain 17 (40)
Human alphaherpesvirus 1 strain KOS (40)
Human betaherpesvirus 5 (40)
Human herpesvirus 2 strain 186 (40)
Mus musculus (32)
Streptococcus suis (2)
Gallus gallus (2)
Escherichia coli (2)
Nannochloropsis oceanica (1)
Staphylococcus epidermidis (1)
Oryza sativa (1)
Setaria italica (1)
Brassica napus (1)
Oryctolagus cuniculus (1)
Rattus norvegicus (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Spodoptera frugiperda (1)
Streptococcus pneumoniae 23F (1)
Sus scrofa (1)
Taxus mairei (1)
uncultivated soil bacterium (1)

Repository

biostudies-arrayexpress (45)
iProX (44)
pride (40)
EGA (20)
MetaboLights (19)
MassIVE (4)
PeptideAtlas (3)
GNPS (1)
NODE (1)

Tissue

Cell culture (10)
Whole body (5)
Others (3)
Epithelial cell (3)
Plant cell (3)
Liver (2)
Permanent cell line cell (2)
Skin (2)
Blood (1)
Blood cell (1)
Blood plasma (1)
Blood platelet (1)
Cell suspension culture (1)
Colon (1)
Embryo (1)
Esophageal epithelium (1)
Esophageal squamous epithelium (1)
Hepatocyte (1)
Intestinal epithelial cell (1)
Keratinocyte (1)
Leaf (1)
Nerve cord (1)
Plant bud (1)
Platelet (1)
Root (1)
Thymic epithelium (1)
Tooth (1)
Vascular tissue (1)

Disease

Disease free (2)
Esophageal cancer (1)
Esophagus squamous cell carcinoma (1)
Liver cancer (1)
Liver cirrhosis (1)
Stage IV colorectal cancer (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (40)
Shotgun proteomics (22)
Mass spectrometry (15)
Mass spectrometry assay (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Bottom-up proteomics (4)
Gel-based experiment (3)
SWATH MS (3)
Data-dependent acquisition (2)
MSE (2)
SRM/MRM (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
Mass spectrometry imaging (1)
Proteogenomics (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (13)
Liquid Chromatography MS - positive - reverse phase (10)
Liquid Chromatography MS - positive - hilic (4)
Agilent 2100 Bioanalyzer (2)
Illumina HiSeq 4000 (2)
TimsTOF Pro (2)
Q Exactive HF-X (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
LTQ Orbitrap Elite (2)
Microbeads (1)
GeneChip Instrument System (1)
Affymetrix mouse gene 1.0 ST arrays (1)
Ribo-Zero Gold (Illumina) (1)
Illumina HiSeq 2000 (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
Liquid Chromatography MS - alternating – hilic (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
QExactive (1)

Publication Date

2022 (19)
2023 (16)
2014 (12)
2021 (11)
2016 (9)
2025 (9)
2024 (9)
2019 (8)
2013 (7)
2020 (7)
2015 (6)
2026 (6)
2012 (5)
2018 (3)
2017 (3)
2010 (2)
2009 (2)
2011 (1)
2006 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16704 (10)
CHEBI:15756 (10)
CHEBI:16015 (9)
CHEBI:17895 (9)
CHEBI:16828 (9)
CHEBI:17368 (9)
CHEBI:17533 (8)
CHEBI:17568 (8)
CHEBI:15891 (8)
CHEBI:55328 (8)
CHEBI:48131 (8)
CHEBI:17295 (8)
CHEBI:17351 (8)
CHEBI:30769 (8)
CHEBI:32389 (7)
CHEBI:50202 (7)
CHEBI:28822 (7)
CHEBI:28592 (7)
CHEBI:16040 (7)
CHEBI:16695 (7)
CHEBI:17802 (7)
CHEBI:16750 (7)
CHEBI:28875 (7)
CHEBI:28842 (7)
CHEBI:17015 (7)
CHEBI:17154 (7)
CHEBI:16235 (7)
CHEBI:16335 (7)
CHEBI:16259 (7)
CHEBI:17509 (7)

Metabolite Name

Cytosine (7)
Hypoxanthine (7)
Uracil (6)
Phytosphingosine (6)
Deoxycholic acid (6)
Betaine (5)
Melibiose (5)
Niacinamide (5)
L-Proline (5)
L-Arginine (5)
L-Histidine (5)
Taurine (5)
Cholic acid (5)
Adenosine (5)
LysoPE(16:1(9Z)/0:0) (5)
Guanine (5)
L-Tryptophan (5)
L-Glutamate (5)
Guanosine (5)
Creatine (5)
L-Carnitine (5)
21-Deoxycortisol (4)
LysoPC(15:0) (4)
Isonicotinic acid (4)
Clausarinol (4)
Sphingosine (4)
L-Lysine (4)
Diethanolamine (4)
DL-2-Aminooctanoic acid (4)
Piperidine (4)

Study type

RNA-seq of coding RNA (17)
Transcription profiling by array (13)
ChIP-seq (7)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Other (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (740)
2022 (674)
2023 (624)
2024 (595)
2021 (546)
2020 (401)
2019 (248)
2018 (213)
2017 (182)
2016 (171)
2015 (154)
2026 (115)
2014 (94)
2013 (64)
2012 (49)
2010 (21)
2011 (19)
2009 (14)
2008 (10)
2006 (4)
2007 (4)
2004 (2)
2002 (2)
2005 (1)
2003 (1)
2001 (1)
1998 (1)

Lab affiliation

Experimental Radiation Oncology, MD Anderson Cancer Center, Houston, TX, USA (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
Xiamen University (2)
BGI-Shenzhen,China (1)
Beijing Friendship Hospital, Capital Medical University (1)
Brigham Young University (1)
Children's Hospital of Soochow University, Suzhou (1)
China Agricultural University (1)
China State Institute of Pharmaceutical Industry (1)
Chinese Academy of Fishery Sciences (1)
College of Animal Science and Veterinary Medicine, Shenyang Agricultural University (1)
College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Shenyang, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Department of Microbiology & Immunology School of Medicine University of Louisville CTRB, Room 309 Louisville, KY, USA 40202 (1)
Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD, USA (1)
Department of Pharmacology, School of Medicine, Case Western Reserve University,cleveland,OH,USA (1)
Department of Plant Biotechnology and Bioinformatics, Ghent University; 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB; 9052 Ghent, Belgium (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)
Guangdong Provincial Key Laboratory of Tropical Disease Research, School of Public Health, Southern Medical University, Guangzhou, China (1)
Henan Agricultural University (1)
Huzhou Cent Hosp, Affiliated Cent Hosp HuZhou University (1)
Institute of Biophysics, Chinese Academy of Sciences (1)
Lab of Proteomics, Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, China. (1)
MOE Laboratory of Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, China (1)
Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University (1)
School of Life Science and Technology, Southeast University, Nanjing, Jiangsu Province, China (1)
School of Life Sciences, Jilin University, Changchun 130012, China (1)
Scripps Research (1)
Shandong University of Traditional Chinese Medicine (1)
Southern Medical University, No. 1023-1063, Shatai South Road, Baiyun District, Guangzhou (1)