Harrison M M - OmicsDI

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Unknown (3667)
Transcriptomics (63)
Proteomics (63)
Genomics (13)
Metabolomics (8)
Models (4)
Genomic (1)

Organisms

Homo sapiens (49)
Mus musculus (26)
Drosophila melanogaster (5)
Severe acute respiratory syndrome coronavirus 2 (5)
Streptomyces coelicolor (4)
Danio rerio (4)
Mus sp. (3)
Pseudomonas aeruginosa PAO1 (3)
Staphylococcus aureus (2)
Rattus norvegicus (2)
Bos taurus (2)
Gallus gallus (2)
Lyssavirus rabies (2)
Mammalia (1)
Haemophilus influenzae 86-028NP (1)
Scophthalmus maximus (1)
Clostridium perfringens (1)
Clostridium perfringens str. 13 (1)
Pasteurella multocida (1)
Locusta migratoria (1)
Arabidopsis lyrata (1)
Haemophilus influenzae (1)
Campylobacter jejuni (1)
Acinetobacter baumannii (1)
Caenorhabditis elegans (1)
Plasmodium falciparum (1)
Arabidopsis thaliana (1)
Anas platyrhynchos (1)
Aspergillus fumigatus var. fumigatus (1)
Bacteria (1)

Organisms

Severe acute respiratory syndrome coronavirus 2 (1)

Repository

biostudies-arrayexpress (73)
pride (53)
MassIVE (9)
MetaboLights (7)
BioModels (4)
ENA (3)
dbGaP (1)
EGA (1)
GNPS (1)

Tissue

Cell culture (10)
Breast (3)
T cell (3)
Bone (2)
Cell line cell (2)
Cell suspension culture (2)
Egg (2)
Lung (2)
Permanent cell line cell (2)
Skin (2)
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Antler (1)
B cell (1)
Blood (1)
Blood cell (1)
Blood plasma (1)
Blood serum (1)
Brain (1)
Breast lobe (1)
Early embryonic cell (1)
Eggshell (1)
Embryonic stem cell (1)
Epithelial cell (1)
Erythrocyte (1)
HEK-293T cell (1)
Hypothalamus (1)
JURKAT cell (1)
Kidney (1)
Kidney cell (1)
Kidney epithelial cell (1)

Disease

Breast cancer (3)
Not applicable (1)
Acute leukemia (1)
Disease free (1)
Frontotemporal dementia (1)
Lung squamous cell carcinoma (1)
Plasmodium malariae malaria (1)

Technology Type

Mass Spectrometry (53)
Shotgun proteomics (26)
Bottom-up proteomics (8)
Mass spectrometry (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Gel-based experiment (4)
Data-dependent acquisition (3)
SWATH MS (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry imaging (2)
Affinity proteomics (1)
All-ion fragmentation (1)
Top-down proteomics (1)

Instrument Platform

Exactive (Thermo Scientific) (4)
Q Exactive (3)
Orbitrap Fusion (2)
Other (1)
Illumina Genome Analyzer IIx (1)
G2505A DNA microarray scanner [Agilent] (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap Ascend (1)
Orbitrap Eclipse (1)
Orbitrap Fusion ETD (1)
Q Exactive Plus (1)
Q-Exactive (1)
TripleTOF 5600 (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (14)
2022 (12)
2025 (11)
2021 (10)
2011 (10)
2024 (9)
2016 (9)
2014 (8)
2010 (8)
2017 (8)
2012 (7)
2009 (7)
2015 (6)
2019 (6)
2020 (5)
2018 (5)
2026 (5)
2023 (3)
2008 (2)
2005 (1)
2006 (1)

UNIPROT ID/AC

P05132 (3)
Q3U214 (3)

CHEBI ID

CHEBI:16551 (2)
CHEBI:17268 (2)
CHEBI:17306 (2)
CHEBI:12936 (1)
CHEBI:1467 (1)
CHEBI:15366 (1)
CHEBI:15428 (1)
CHEBI:15603 (1)
CHEBI:15756 (1)
CHEBI:15774 (1)
CHEBI:15824 (1)
CHEBI:15830 (1)
CHEBI:15903 (1)
CHEBI:16000 (1)
CHEBI:16024 (1)
CHEBI:16108 (1)
CHEBI:16128 (1)
CHEBI:16288 (1)
CHEBI:16332 (1)
CHEBI:16349 (1)
CHEBI:16414 (1)
CHEBI:16463 (1)
CHEBI:16546 (1)
CHEBI:16547 (1)
CHEBI:16680 (1)
CHEBI:16857 (1)
CHEBI:16865 (1)
CHEBI:16954 (1)
CHEBI:16977 (1)
CHEBI:16995 (1)

Metabolite Name

Maltose (2)
Myo-inositol (2)
(+)-sesamolin (1)
(2S)-2-isopropyl-3-oxosuccinate (1)
(S)-2-aceto-2-hydroxybutanoate (1)
1,2-benzoquinone (1)
1-O-(4-coumaroyl)-beta-D-glucose (1)
1-O-feruloyl-beta-D-glucose (1)
1-O-sinapoyl-beta-D-glucose (1)
1-aminocyclopropane-1-carboxylate (1)
2-dehydropantoate (1)
2-isopropylmaleate (1)
4-aminobutyraldehyde (1)
6,7-dimethyl-8-(1-D-ribityl)lumazine (1)
8-amino-7-oxononanoate (1)
ALA (1)
Acetate (1)
Alpha,alpha-trehalose (1)
Alpha-D-glucose (1)
Alpha-tocopherol (1)
Amylopectin (1)
Arachidic acid (1)
Benzoic acid (1)
Beta-D-galactose (1)
Beta-D-glucose (1)
Beta-L-arabinose 1-phosphate (1)
CE 18:0 (1)
Cer 34:0;2O (1)
Cer 34:1;2O|Cer 18:1;2O/16:0 (1)
Cer 36:1;2O (1)

First Public Date

2014 (2)
2021 (1)

Modelling Approach

Ordinary differential equation model (4)

Lab affiliation

College of Life Sciences, University of Dundee (2)
Copenhagen Center for Glycomics and Department of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, DK-2200 Copenhagen N, Denmark (2)
Department of Molecular Medicine The Scripps Research Institute (2)
Natural History Museum of Denmark University of Copenhagen, Øster Voldgade 5–7, 1350 Copenhagen, Denmark (2)
Professor, Molecular Medicine Scientific Director UF Scripps Biomedical Research University of Florida (2)
Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, United Kingdom (1)
Bio21 Molecular Science and Biotechnology Institute,Department of Biochemistry and Pharmacology, University of Melbourne (1)
BioArCh, Department of Archaeology, University of York (1)
Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR (1)
Center for Epigenetics Van Andel Research Institute Grand Rapics, Michigan 49503, USA (1)
Clem Jones Centre of Aging Dementia Research, Queensland Brain Institute, University of Queensland (1)
Collaborative Center for Translational Mass Spectrometry, Translational Genomics Research Institute, Phoenix, AZ (1)
DZNE Munich Neuroproteomics Feodor-Lynen Str. 17 81377 Munich Germany (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Cell Biology and Physiology, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, United States. (1)
Department of Internal Medicine – Cardiology Division Investigator, Nora Eccles Harrison Cardiovascular Research& Training Institute, University of Utah, Salt Lake City, UT, USA (1)
Department of Microbiology, Monash University, Clayton, Victoria, Australia (1)
Department of Oncology, Laboratory for Disease mechanisms in cancer, KU Leuven Campus Gasthuisberg O&N1, Herestraat 49 - box 603 3000 Leuven (Belgium) (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried (1)
Dept of Pharmacology and Immunology Medical University of South Carolina Charleston, SC, USA (1)
Dept. Molecular Microbiology John Innes Centre Norwich Research Park Norwich, UK (1)
Dept. of Pharmacology Basic Science Building, Rm 306 Medical University of South Carolina United States of America (1)
Division of Molecular Pathology Molecular and Systems Oncology Team The Institute of Cancer Research 237 Fulham Road, SW3 6JB London United Kingdom (1)
Division of Pathology Laboratories, Institute of Genetics and Molecular Medicine, University of Edinburgh (1)
Executive Director Cancer Research, Peter MacCallum Cancer Centre (1)
Group Leader Dept Molecular Microbiology John Innes Centre Norwich, UK (1)
Helmholtz-Diabetes Center (1)
Infection Biology – LSHTM, Keppel street, WC1E 7HT (1)
John Innes Centre Molecular Microbiology Norwich, UK (1)
John Innes Centre Molecular Microbiology Nurwich, UK (1)

IsPrivate

False (4)

Classification

viruses (1)

Study type

Transcription profiling by array (41)
RNA-seq of coding RNA (8)
Comparative genomic hybridization by array (7)
ChIP-seq (7)
ChIP-chip by array (2)
Methylation profiling by array (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Hi-C (1)
Proteomic profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (436)
2021 (408)
2025 (383)
2023 (375)
2024 (349)
2020 (286)
2019 (229)
2018 (210)
2015 (166)
2016 (152)
2017 (149)
2014 (126)
2013 (85)
2012 (76)
2010 (58)
2011 (57)
2009 (54)
2026 (47)
2008 (27)
2007 (17)
2005 (13)
2006 (11)
2003 (8)
2001 (6)
2004 (5)
2002 (2)
1999 (2)
2000 (1)
1998 (1)
1997 (1)

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Flux syntheses and single-crystal structures of CsNa₁₀ M ₄(AsO₄)₉ (M = Zr, Hf).

Not available

S-EPMC9260365 | biostudies-literature

Profiling elite male 100-m sprint performance: The role of maximum velocity and relative acceleration.

Not available

S-EPMC8847979 | biostudies-literature

Parainfluenza virus 5 m protein interaction with host protein 14-3-3 negatively affects virus particle formation.

Not available

S-EPMC3067794 | biostudies-literature

Establishment of regions of genomic activity during the Drosophila maternal-to-zygotic transition

A conspicuous feature of early animal development is the lack of transcription from the embryonic genome, and it typically takes several hours to several days (depending on the species) until widespread transcription of the embryonic genome begins. Although this transition is ubiquitous, relatively ...

ORGANISM(S): Drosophila melanogaster

2014-10-16 | E-GEOD-58935 | biostudies-arrayexpress

Lasting consequences of psyllid (Bactericera cockerelli L.) infestation on tomato defense, gene expression, and growth.

Not available

S-EPMC7905647 | biostudies-literature

Nucleocytoplasmic trafficking of G2/M regulators in yeast.

Not available

S-EPMC2526683 | biostudies-literature

Mycoplasma genitalium and M. pneumoniae Regulate a Distinct Set of Protein-Coding Genes in Epithelial Cells.

Not available

S-EPMC8544821 | biostudies-literature

CSF1R Ligands Expressed by Murine Gliomas Promote M-MDSCs to Suppress CD8⁺ T Cells in a NOS-Dependent Manner.