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TranscriptomicsGENCODE PCR-Seq Batch XII
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by sequencing. The experiment ...
ORGANISM(S): Homo sapiens 
2014-11-26 | E-MTAB-3122 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch XIV
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by sequencing. The experiment ...
ORGANISM(S): Homo sapiens 
2014-12-16 | E-MTAB-3168 | biostudies-arrayexpress
TranscriptomicsRNA-seq transcript assembly evaluation
To assess the performance of computational methods for exon identification, transcript reconstruction and expression level quantification from RNA-seq data, 24 protocol variants of 14 independent software programs (AUGUSTUS, Cufflinks, Exonerate, GSTRUCT, iReckon, mGene, mTim, NextGeneid, Oases, SLI...
ORGANISM(S): Drosophila melanogaster 
2013-07-15 | E-MTAB-1730 | biostudies-arrayexpress
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