Hartmann A A - OmicsDI

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Unknown (3705)
Transcriptomics (111)
Proteomics (86)
Genomics (24)
Models (5)
Metabolomics (3)
Clinical (1)

Organisms

Homo sapiens (114)
Mus musculus (39)
Escherichia coli (10)
Arabidopsis thaliana (8)
Drosophila melanogaster (8)
Rattus norvegicus (7)
Aspergillus fumigatus (2)
Medicago truncatula (2)
Saccharomyces cerevisiae (2)
Ascaris suum (2)
Cereibacter sphaeroides 2.4.1 (2)
H1N1 swine influenza virus (1)
Influenza A virus (A/New Caledonia/20/1999(H1N1)) (1)
Lactococcus lactis (1)
Geospiza magnirostris (1)
synthetic construct (1)
Saccharomyces kudriavzevii (1)
Bos taurus (1)
Glycine max (1)
Caenorhabditis elegans (1)
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Bacillus subtilis subsp. subtilis str. 168 (1)
Gemmatimonas phototrophica (1)
Lysiphlebus fabarum (1)
Nicotiana tabacum (1)
Pseudomonas aeruginosa PAO1 (1)
Rhizorhabdus wittichii (1)
Rhodopseudomonas palustris CGA009 (1)
Roseobacter denitrificans OCh 114 (1)
Solanum tuberosum (1)

Organisms

Homo sapiens (2)
Nitrospirillum viridazoti Y2 (1)

Repository

biostudies-arrayexpress (112)
pride (78)
EGA (13)
ENA (9)
BioModels (5)
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geo (1)
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Tissue

Cell culture (23)
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Astrocyte (1)
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Breast epithelium (1)
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Cardiac muscle myoblast (1)
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Purkinje cell (1)

Disease

Acute leukemia (6)
Acute myeloid leukemia (4)
Amyotrophic lateral sclerosis (2)
Chronic lymphocytic leukemia (2)
Disease free (2)
Influenza (1)
Swine influenza (1)
Non-classic glioblastoma (1)
Chronic pancreatitis (1)
The study population will consist of adult patients undergoing elective left-sided colonic surgery. (1)
Anaplastic large cell lymphoma (1)
Breast cancer (1)
COVID-19 (1)
Chordoma (1)
Desmoplastic small round cell tumor (1)
Endometriosis (1)
FTDALS1 (1)
Frontotemporal dementia (1)
Frontotemporal dementia and/or amyotrophic lateral sclerosis-3 (1)
Hodgkin's lymphoma (1)
Lung cancer (1)
Medulloblastoma (1)
Migraine (1)
Myocardial infarction (1)
Osteosarcoma (1)
Paraganglioma (1)
Richter's syndrome (1)
Sarcoma (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Type 1 diabetes mellitus (1)

Technology Type

Mass Spectrometry (78)
Shotgun proteomics (50)
Affinity purification coupled with mass spectrometry proteomics (14)
Bottom-up proteomics (10)
Data-dependent acquisition (9)
Gel-based experiment (6)
Data-independent acquisition (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
GeneChip HTA 2.0 (1)
Illumina HiSeq 2000 (1)
SRM/MRM (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
Illumina HiSeq 1500 (2)
I.DOT (Dispendix), C.WASH (CYTENA), Qubit Fluorometer (Thermo Fisher Scientific), Agilent TapeStation 4200 (1)
BD FACSDiscover S8 (1)
Axon- GenePix4000B (1)
DNBSEQ-T7 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
MaXis (1)
Q Exactive (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Thermo Trace GC PolarisQ (1)

Publication Date

2013 (32)
2022 (21)
2012 (14)
2024 (13)
2023 (13)
2016 (11)
2014 (11)
2026 (10)
2021 (10)
2015 (10)
2011 (10)
2020 (9)
2019 (9)
2010 (9)
2025 (7)
2009 (6)
2017 (4)
2008 (4)
2018 (2)
2007 (2)

UNIPROT ID/AC

A5V2A0_SPHWW (4)
A5V2E2_SPHWW (4)
A5V2E5_SPHWW (4)
A5V2G0_SPHWW (4)
A5V2H3_SPHWW (4)
A5V2H4_SPHWW (4)
P01375 (2)
Q92985 (2)
P00451 (1)
P00488 (1)
P00734 (1)
P00740 (1)
P00742 (1)
P00747 (1)
P00748 (1)
P01008 (1)
P01574 (1)
P02671 (1)
P02675 (1)
P02679 (1)
P03951 (1)
P03952 (1)
P04070 (1)
P05160 (1)
P07204 (1)
P07225 (1)
P08709 (1)
P10646 (1)
P12259 (1)
P13726 (1)

CHEBI ID

CHEBI:10033 (1)
CHEBI:15346 (1)
CHEBI:15351 (1)
CHEBI:15361 (1)
CHEBI:15422 (1)
CHEBI:15688 (1)
CHEBI:15740 (1)
CHEBI:15846 (1)
CHEBI:15946 (1)
CHEBI:16001 (1)
CHEBI:16236 (1)
CHEBI:16298 (1)
CHEBI:16761 (1)
CHEBI:16905 (1)
CHEBI:16908 (1)
CHEBI:17138 (1)
CHEBI:17234 (1)
CHEBI:17665 (1)
CHEBI:18021 (1)
CHEBI:18367 (1)
CHEBI:28304 (1)
CHEBI:28384 (1)
CHEBI:29864 (1)
CHEBI:30089 (1)
CHEBI:422 (1)
CHEBI:52684 (1)
CHEBI:10072 (1)
CHEBI:1148 (1)
CHEBI:15428 (1)
CHEBI:15429 (1)

Metabolite Name

Pantothenic acid (2)
1,3-Dihydroxyaceton (1)
4-Acetamidobutyric acid (1)
4-Hydroxyproline (1)
5-Fluorocytosine (1)
7-Methylguanine (1)
A114002-101_NA114002 (1)
A145016-101_NA145016 (1)
A147011-101_NA147011 (1)
A165004-101_NA165004 (1)
A184030-101_NA184030 (1)
Acetylcarnitine (1)
Adenosine (1)
Alanine (1)
Arabitol (1)
Betaine (1)
Butanoic acid, 2,4-dihydroxy- (1)
Butyryl-carnitine (1)
CHES (1)
Carnitine (1)
Choline (1)
Creatine (1)
Creatinine (1)
Cytidine (1)
Cytosine (1)
Decanoyl-carnitine (1)
Diethylenglycol (1)
Dimethylarginine (1)
Dotriacontane, n- (1)
Erythritol (1)

First Public Date

2014 (3)
2025 (2)
2026 (1)
2023 (1)
2021 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (4)

Study status

Completed (1)

Lab affiliation

German Cancer Consortium (DKTK), partner site Freiburg German Cancer Research Center (DKFZ) Foundation under Public Law c/o Department of Urology Zentrale Klinische Forschung (ZKF) Medical Center-University of Freiburg Breisacher Str. 66, 79106 Freiburg, Germany (4)
Institute of Neuronal Cell Biology Technical University of Munich Germany (4)
Technical University of Munich, School of Medicine, Institute of Virology, 81675 Munich, Germany (4)
Center for Molecular Neurobiology (ZMNH), University Medical Center Hamburg-Eppendorf, Hamburg, Germany (2)
Li2D (2)
Aarhus University, Department of Molecular Biology and Genetics (1)
Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany (1)
BIOCEV, First Faculty of Medicine, Charles University, Czech Republic (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine (1)
Centre for Clinical Proteomics, Department of Clinical Biochemistry and Pharmacology, Odense University Hospital, Denmark (1)
DZNE: German center for Neurodegenerative Diseases, Munich, https://www.dzne.de/index.php?id=105&L=1 (1)
Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark (1)
Department of Chemistry and Biochemistry, Texas Tech University (1)
Department of Chemistry and Bioscience Aalborg University Denmark (1)
Department of Molecular Biology and Biotechnology, University of Sheffield, UK (1)
Department of Molecular Biology and Genetics, Aarhus University (1)
Department of Molecular Biology and Genetics, Aarhus University, Denmark. (1)
Department of Pediatrics Medizinische Fakultät Carl Gustav Carus Technische Universität Dresden 01307 Dresden, Germany (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Department of Proteomics and Signal Transduction. (1)
Department of Proteomics and Signal Transduction. MaxPlanck Institute of Biochemistry (1)
Department of Reproductive Endocrinology - University of Zurich, Switzerland (1)
Department of Translational Research in Psychiatry, Proteomics Core Unit, Max Planck Institute of Psychiatry, Germany (1)
Director - Analytical Services at the CCRC (1)
Director, Dept of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Division of Applied Functional Genomics, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), Heidelberg, Germany (1)
Division of Applied Functional Genomics, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), NCT Heidelberg, Germany (1)
ETH Zurich, Institute of Molecular Systems Biology (1)
Experimental Tumor Pathology, Institute of Pathology, University Hospital Erlangen, Friedrich‐Alexander University Erlangen‐Nürnberg (FAU), Erlangen 91054, Germany (1)

Keyword

Bisacodyl (1)
Sodium phosphate (Colex) (1)

IsPrivate

False (5)

Study type

Transcription profiling by array (72)
RNA-seq of coding RNA (11)
Comparative genomic hybridization by array (9)
Transcription profiling by RT-PCR (5)
ChIP-chip by tiling array (4)
Methylation profiling by array (4)
RNA-seq of non coding RNA (2)
Transcription profiling by tiling array (1)
Other (1)
ChIP-seq (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
Interventional (1)

Release Date

2022 (421)
2021 (420)
2023 (392)
2025 (340)
2020 (301)
2024 (281)
2018 (266)
2019 (220)
2016 (180)
2017 (172)
2015 (148)
2014 (116)
2013 (106)
2012 (87)
2026 (79)
2011 (62)
2010 (58)
2009 (51)
2008 (32)
2006 (17)
2007 (15)
2005 (13)
2003 (11)
2002 (8)
1999 (6)
2004 (4)
2000 (4)
2001 (2)
1998 (2)
1997 (2)

Location

Netherlands (1)

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Hartmann zebra genome

Genome assembly of a female Hartmann zebra

PRJEB102554 | ENA

Hartmann zebra genome sequence

de novo genome assembly of a female Hartmann zebra (Equus zebra hartmannae)

PRJEB102460 | ENA

Untargeted metabolomics as a hypothesis-generation tool in plant protection product discovery: Highlighting the potential of trehalose and glycerol metabolism of fungal conidiospores as novel targets

INTRODUCTION: The production of high quality and safe food represents a main priority for the agri-food sector in the effort to sustain the exponentially growing human population. Nonetheless, there are major challenges that require the discovery of new, alternative, and improved...

2020-09-08 | MTBLS1565 | MetaboLights

Postoperative effects of laparoscopic Hartmann reversal: A multicenter propensity score matched study.

Not available

S-EPMC10237654 | biostudies-literature

Variability of wavefront aberration measurements in small pupil sizes using a clinical Shack-Hartmann aberrometer.

Not available

S-EPMC362876 | biostudies-literature

Shack-Hartmann wavefront sensors based on 2D refractive lens arrays and super-resolution multi-contrast X-ray imaging.

Not available

S-EPMC7206553 | biostudies-literature

Comparison of Ocular Wavefront in Seated and Supine Positions Using a Hand-Held Hartmann-Shack Aberrometer.

Not available

S-EPMC12470436 | biostudies-literature

Haplotaxis gordioides (Hartmann in Oken, 1819) (Annelida, Clitellata) as a sub-cosmopolitan species: a commonly view challenged by DNA barcoding

Haplotaxis gordioides as a sub-cosmopolitan species

PRJEB58416 | ENA

IRECS: a new algorithm for the selection of most probable ensembles of side-chain conformations in protein models.

Not available

S-EPMC2206697 | biostudies-literature

Transcriptional response of Arabidopsis thaliana to exogenous application of N-hydroxypipecolic acid (NHP).

Previous studies from our laboratory have shown that the resistance increase observed after biological systemic acquired resistance (SAR) induction in plants can be mimicked by exogenous plant treatment with N-hydroxypipecolic acid (NHP, Hartmann et al., 2018, Schnake et al., 2020). Moreover, exoge...

ORGANISM(S): Arabidopsis thaliana

2021-05-03 | E-MTAB-10230 | biostudies-arrayexpress

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3935 Results

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