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TranscriptomicsCopy number profiling of 36 ovarian tumors on Affymetrix 100K SNP arrays and 16 ovarian tumors on 500K SNP arrays
Copy number profiling of 36 ovarian tumors on Affymetrix 100K SNP arrays Thirty-six ovarian tumors were profiled for copy-number alterations with the Affymetrix 100K Mapping Array. Copy number profiling of 36 ovarian tumors on Affymetrix 500K SNP arrays Sixteen ovary tumors were profiled for copy...
ORGANISM(S): Homo sapiens 
2010-12-16 | E-GEOD-26075 | biostudies-arrayexpress
TranscriptomicsAgilent 244A aCGH array for breast, lung, melanoma, ovary, and prostate
373 tumors were profiled for copy-number alterations with the high-resolution Agilent 244A aCGH Array. Tumor samples were assayed on Agilent Human Genome CGH 244A Microarrays with the intent of surveying the landscape of genomic alterations in 5 tumor types. Human male genomic DNA (Promega P/N G1471...
ORGANISM(S): Homo sapiens 
2010-07-29 | E-GEOD-20393 | biostudies-arrayexpress
ProteomicsVartanian et al. 2015 raw data
a list of raw mass spectrometry data files for manuscript authored by Vartanian et al.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000079314 | MassIVE
TranscriptomicsFACS-sorted Pancreatic Adenocarcinoma for Molecular Profiling
Frozen, whole tissue was dissociated and sorted into to tumor and stromal fractions via FACS Keywords: Mapping Array Profiling of tumor and stromal fractions from whole tissue
ORGANISM(S): Homo sapiens 
2010-02-18 | E-GEOD-14579 | biostudies-arrayexpress
GenomicsGenentech whole genome and transcriptome sequencing of four hepatocellular carcinoma patients

Hepatitis B virus (HBV) infection is a major risk factor for hepatocellular carcinoma (HCC). In this study we sequenced the whole genome (~80X) and transcriptome of tumor and non-tumor samples from four HCC patients and identified over two hundred HBV integration sites. We found significant clona...

phs000384.v1.p1 | EGA
GenomicsColon_Illumina_2.5M_Controls - samples
Colon matched tumour samples
EGAD00010000274 | EGA
GenomicsColon_Illumina_2.5M_Cases - samples
Colon tumour samples
EGAD00010000272 | EGA
Genomicsena-DATASET-Genentech-10-08-2012-19:54:35:559-18 - samples
Exome capture sequencing of colon tumor/normal pairs
EGAD00001000216 | EGA
Genomicsena-DATASET-Genentech-10-08-2012-19:45:02:785-17 - samples
RNA sequencing of colon tumor/normal sample pairs
EGAD00001000215 | EGA
Genomicsena-DATASET-Genentech-10-08-2012-19:36:55:498-15 - samples
Whole genome sequencing of colon samples
EGAD00001000214 | EGA
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