He Gong G - OmicsDI

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Unknown (583)
Proteomics (37)
Multiomics (6)
Transcriptomics (4)
Metabolomics (4)
Genomics (1)
Other (1)

Organisms

Homo sapiens (30)
Mus musculus (3)
Rattus norvegicus (2)
Escherichia coli (1)
Oryza sativa (1)
Rhodotorula glutinis (1)

Repository

pride (17)
PeptideAtlas (14)
biostudies-arrayexpress (4)
MassIVE (4)
MetaboLights (4)
iProX (2)
EGA (1)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (7)
Others (3)
Chondrocyte (2)
Whole body (2)
Blood plasma (1)
Blood serum (1)
Brain (1)
Fibroblast (1)
Hepatocyte (1)
Lung (1)
Nasopharyngeal epithelial cell (1)
Neoplastic cell (1)
Seedling (1)
Skeletal muscle (1)
Skin (1)
Stomach (1)

Disease

Not Available (1)
Bacterial sepsis (1)
Lung cancer (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (17)
Shotgun proteomics (6)
SWATH MS (5)
Mass spectrometry (4)
Bottom-up proteomics (4)
Data-independent acquisition (4)
Gel-based experiment (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

TripleTOF 5600 (12)
MS:1000031 (3)
LTQ Orbitrap Elite (2)
Instrument (1)
API 4000 QTRAP (AB Sciex) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
TSQ Quantum XLS (Thermo Scientific) (1)
QExactive (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Applied biosystems / mds sciex q trap (1)
Applied biosystems / mds sciex qstar (1)
Thermo lcq deca (1)
Thermo lcq deca xp (1)
Thermo ltq (1)
UNKNOWN UNKNOWN (1)
Waters q-tof (1)

Publication Date

2015 (11)
2025 (7)
2014 (5)
2023 (4)
2016 (4)
2018 (3)
2013 (2)
2021 (2)
2022 (2)
2017 (1)
2026 (1)
2020 (1)
2019 (1)
2007 (1)

UNIPROT ID/AC

A0A024RC46 (14)
B3KML9 (14)
B3KT93 (14)
B4DRV9 (14)
B4E3A4 (14)
E9PB61 (14)
G5E972 (14)
G8JLB6 (14)
H0YAR2 (14)
H0YJH7 (14)
I3L4N8 (14)
J9JID7 (14)
O00148 (14)
O00571 (14)
O15523 (14)
O43143 (14)
O43390 (14)
O60506 (14)
O60832 (14)
O94973 (14)
O95678 (14)
O95782 (14)
O95782-2 (14)
P02533 (14)
P02538 (14)
P02545 (14)
P02545-2 (14)
P02545-3 (14)
P02786 (14)
P04259 (14)

ENSEMBL ID

ENSG00000170477 (12)
ENSG00000247315 (7)
ENSG00000147251 (4)

CHEBI ID

CHEBI:12962 (2)
CHEBI:15676 (2)
CHEBI:15710 (2)
CHEBI:15891 (2)
CHEBI:16040 (2)
CHEBI:16235 (2)
CHEBI:16393 (2)
CHEBI:16411 (2)
CHEBI:16552 (2)
CHEBI:16610 (2)
CHEBI:16668 (2)
CHEBI:16675 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:16797 (2)
CHEBI:16856 (2)
CHEBI:17154 (2)
CHEBI:17368 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17748 (2)
CHEBI:17750 (2)
CHEBI:17821 (2)
CHEBI:17858 (2)
CHEBI:18053 (2)
CHEBI:18127 (2)
CHEBI:18295 (2)
CHEBI:18385 (2)

Metabolite Name

Eicosane (2)
Heneicosane (2)
(1-Methoxy-pentyl)-cyclopropane (1)
(3R)-(+)-3-Acetamidopyrrolidine (1)
(E)-Hex-3-enyl 2,3,4,5,6-pentafluorobenzoate (1)
.alpha.-Acetobutyrolactone (1)
.alpha.-D-Galactopyranoside, methyl 2,3-bis-O-(trimethylsilyl)-, cyclic phenylboronate (1)
.alpha.-D-Mannopyranose, 5TMS derivative (1)
.beta.-D-Glucopyranose, 5TMS derivative (1)
.beta.-Eucaine (1)
.gamma.-Tocopherol, TMS derivative (1)
1,1'-Biphenyl, 4,4'-dinitro- (1)
1,2,2-Trimethylpropyl dimethylphosphinate (1)
1,2,4,5-Tetramethyl-3-neopentylbenzene (1)
1,2,4-Benzenetricarboxylic acid, 1,2-dimethyl ester (1)
1,2,4-Triazolo[4,3-a]pyrazine-8-carboxylic acid, 2,3-dihydro-3-oxo-, methyl ester (1)
1,2,4-triazines (1)
1,2-Diiodoethylene (1)
1,3,2-Oxazaborolane, 2-butyl- (1)
1,3,5-Triazine-2,4-diamine, N-ethyl-6-methoxy- (1)
1,3-Benzenedicarboxamide, 5-nitro-N,N'-diphenyl- (1)
1,3-Benzenediol, o-(4-ethylbenzoyl)-o'-(3-methylbenzoyl)- (1)
1,3-Diphenyl-2-azafluorene (1)
1,3-Propanediol, 2TMS derivative (1)
1,4-Naphthalenedione, 5,8-dihydroxy-2,3,7-trimethyl- (1)
1,4-benzenediamine, 2-[(3,4-dimethylphenyl)sulfonyl]-N4,N4-dimethyl- (1)
1,4-benzodiazepines (1)
1,5,5-Triphenyl-2-thioxo-4-imidazolidinone (1)
1,5-Anhydrohexitol, 4TMS derivative (1)
1,5-Dimethyl-2-pyrrolidinone (1)

Modification

Not available (1)

Study type

Transcription profiling by array (2)
RNA-seq of coding RNA (2)

Release Date

2022 (93)
2025 (80)
2023 (80)
2024 (79)
2021 (77)
2020 (39)
2019 (29)
2018 (27)
2015 (17)
2017 (16)
2016 (14)
2013 (9)
2014 (7)
2026 (7)
2012 (5)
2011 (4)
2009 (3)
2010 (1)

Lab affiliation

Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China. (3)
Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China (1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Cancer Research Institute, Xiangya Basic Medical College, Central South University, No. 110 Xiangya Road, Kaifu District, Changsha City, Hunan Province (1)
Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China (1)
Huashan Hospital, Fudan University (1)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (1)
Justus Liebig University Giessen Department of Anatomy and Cell Biology Aulweg 123 35392 Giessen (1)
Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing 100191, China (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University , Guangzhou 510632, China. (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou 510632, China (1)
National Center for Protein Sciences (The PHOENIX center, Beijing) (1)
Sequence database group (1)
The First Affiliated Hospital of Xi’an Jiaotong University (1)
Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Medical Innovation Center and State Key Laboratory of Cardiology, Shanghai East Hospital, Clinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Sports and Health Research Center, Tongji University Department of Physical Education, Tongji University, Shanghai 200092, China (1)

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Multi-omics metabolism analysis on irradiation-induced oxidative stress to Rhodotorula glutinis

Oxidative stress is induced by various natural abiotic factors including irradiation among many microorganisms and has been demonstrated that it significantly improved growth rate and lipid production of R. glutinis. However, the specific mechanisms of how irradiation influence the metabolism of R. ...

ORGANISM(S): Rhodotorula glutinis

2018-10-25 | PXD009678 | Pride

Citrin deficiency presenting as acute liver failure in an eight-month-old infant.

Not available

S-EPMC4476898 | biostudies-literature

Combined metabolomics with transcriptomics reveals important serum biomarkers correlated with lung cancer proliferation through calcium signaling pathway

Lung cancer (LC) is still one of the most deadly cancers in the world, but there is a lack of non-invasive biomarkers to assist diagnosis and guide treatment. Herein, untargeted serum metabolomics of 57 LC patients and 59 HC people was performed based on gas chromatography-mass spectrography (GC-...

2025-04-29 | MTBLS1517 | MetaboLights

Supplementation with honeysuckle extract improves growth performance, immune performance, gut morphology, and cecal microbes in geese.

Not available

S-EPMC9669450 | biostudies-literature

Contribution of the tRNA^Ile 4317A→G mutation to the phenotypic manifestation of the deafness-associated mitochondrial 12S rRNA 1555A→G mutation.

Not available

S-EPMC5836119 | biostudies-literature

Design, synthesis, and LFA-1/ICAM-1 antagonist activity evaluation of Lifitegrast analogues.

Not available

S-EPMC8853157 | biostudies-literature

Access to family resources by families living with schizophrenia: a qualitative study of primary care workers in urban Beijing, China.

Not available

S-EPMC9454069 | biostudies-literature

State-Specific Peptide Design Targeting G Protein-Coupled Receptors.

Not available

S-EPMC12570140 | biostudies-literature

Detection of genomic G-quadruplexes in living cells using a small artificial protein.

Not available

S-EPMC7672459 | biostudies-literature

Age-, sex- and proximal-distal-resolved multi-omics identifies regulators of intestinal aging in non-human primates.

The incidence of intestinal diseases increases with age, but the regulators of gut aging and the molecules linking gut aging and diseases remain largely unknown. By profiling the transcriptome, proteome, phosphoproteome and metabolome of 104 Macaca fascicularis large intestinal tissues, ...

2023-12-14 | MTBLS7612 | MetaboLights

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630 Results

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OmicsDI is part of the ELIXIR infrastructure

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