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Unknown (5162)
Proteomics (192)
Transcriptomics (62)
Genomics (23)
Metabolomics (10)
Multiomics (3)
Other (2)
Genomic (1)

Organisms

Homo sapiens (120)
Andropogon gerardi (66)
Bacteria (66)
Canis lupus familiaris (66)
Mus musculus (38)
Saccharomyces cerevisiae (6)
Rattus norvegicus (3)
Oryza sativa (3)
Ovis aries (2)
Drosophila melanogaster (2)
Arabidopsis thaliana (2)
environmental samples (1)
Drosophila mojavensis (1)
Aspergillus flavus (1)
Brucella melitensis (1)
uncultured bacterium (1)
Pan troglodytes (1)
mixed sample (1)
Caenorhabditis elegans (1)
Pseudomonas aeruginosa (1)
Danio rerio (1)
Oryctolagus cuniculus (1)
Papilio xuthus (1)
Rosa roxburghii (1)
Sedum plumbizincicola (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Staphylococcus aureus subsp. aureus RN4220 (1)
Sus scrofa domesticus (1)
Trichuris sp. ex Homo sapiens JP-2011 (1)
Halobacterium salinarum NRC-1 (1)

Repository

biostudies-arrayexpress (81)
PeptideAtlas (68)
pride (66)
iProX (53)
MetaboLights (10)
EGA (5)
MassIVE (5)
GPMDB (2)
dbGaP (1)

Tissue

Liver (44)
Cell culture (16)
Others (6)
Brain (6)
Liver (6)
Testis (5)
Blood plasma (4)
Colon (4)
Stem cell (4)
Epithelial cell (3)
Macrophage (3)
Permanent cell line cell (3)
Male Reproductive System (2)
Plasma Non-glyco (2)
B cell (2)
Bone marrow (2)
Cell suspension culture (2)
Ovary (2)
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Abdominal adipose tissue (1)
Adipocyte of omentum tissue (1)
Bladder (1)
Blood cell (1)
Blood serum (1)
Cerebrospinal fluid (1)
Cornea (1)
Cotyledon (1)
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Embryo (1)
Embryonic stem cell (1)

Disease

Disease free (4)
Breast cancer (3)
Not Available (2)
Brain glioblastoma multiforme (2)
Colon cancer (2)
Hepatocellular carcinoma (2)
Bladder neck obstruction (1)
COVID-19 (1)
Eosinophilic esophagitis (1)
Gastric adenocarcinoma (1)
Liver inflammation (1)
Myopia (1)
Severe acute respiratory syndrome (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (66)
Shotgun proteomics (42)
Mass spectrometry (10)
Bottom-up proteomics (9)
Gel-based experiment (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-independent acquisition (3)
SWATH MS (3)
Data-dependent acquisition (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Mass spectrometry imaging (1)
Proteogenomics (1)

Instrument Platform

Unknown (29)
LCQ DECA XP PLUS (15)
LCQ Classic (6)
LTQ (6)
Liquid Chromatography MS - positive - reverse phase (5)
Illumina NovaSeq 6000 (4)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina Genome Analyzer (3)
Liquid Chromatography MS - positive - hilic (3)
LCQ DECA XP (3)
Illumina Genome Analyzer II (2)
Illumina HiSeq 4000 (2)
Instrument (2)
Q Exactive HF (2)
Liquid Chromatography MS - negative - hilic (2)
LCQ DECA (2)
LTQ Orbitrap Elite (2)
LTQ Orbitrap Velos (2)
Micromass Q-ToF (2)
Illumina HiSeq 2500 (1)
LTQ Orbitrap (1)
LTQ XL (1)
TripleTOF 6600 (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Liquid Chromatography MS - (1)
MS Imaging - (1)
Liquid Chromatography MS - negative (1)
QExactive (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Applied biosystems / mds sciex q trap (1)

Publication Date

2014 (19)
2022 (18)
2021 (18)
2023 (16)
2015 (15)
2025 (15)
2013 (13)
2010 (12)
2019 (12)
2012 (10)
2016 (8)
2024 (8)
2020 (7)
2026 (6)
2017 (5)
2018 (5)
2006 (4)
2008 (3)
2004 (3)
2007 (2)
2011 (1)
2005 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

P31327 (43)
B4E3A4 (39)
P60709 (39)
P63261 (39)
P25705 (38)
A5A3E0 (37)
P06576 (37)
Q9BYX7 (35)
P04264 (34)
P68032 (34)
P68133 (34)
I3L4N8 (33)
P00367 (33)
P07477 (33)
P62736 (33)
P63267 (33)
P69891 (33)
P69892 (33)
P35908 (32)
P68363 (32)
Q13707 (32)
Q9BQE3 (32)
P02792 (31)
P05787 (31)
P0CG38 (31)
P13645 (31)
P49448 (31)
Q562R1 (31)
Q7Z794 (31)
P0CG39 (30)

ENSEMBL ID

ENSG00000170477 (9)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:15354 (5)
CHEBI:30769 (5)
CHEBI:16755 (4)
CHEBI:16040 (4)
CHEBI:18183 (4)
CHEBI:28834 (4)
CHEBI:17597 (4)
CHEBI:17895 (4)
CHEBI:16828 (4)
CHEBI:17351 (4)
CHEBI:17368 (4)
CHEBI:15367 (3)
CHEBI:28238 (3)
CHEBI:30805 (3)
CHEBI:15765 (3)
CHEBI:9907 (3)
CHEBI:18132 (3)
CHEBI:36313 (3)
CHEBI:17802 (3)
CHEBI:15956 (3)
CHEBI:30832 (3)
CHEBI:28875 (3)
CHEBI:17780 (3)
CHEBI:116314 (3)
CHEBI:16393 (3)
CHEBI:27823 (3)
CHEBI:16335 (3)
CHEBI:18176 (3)
CHEBI:17568 (3)
CHEBI:17509 (3)

Metabolite Name

Choline (4)
Hypoxanthine (4)
Uracil (3)
4-Hydroxybenzaldehyde (3)
Deoxycholic acid (3)
Adenosine (3)
Cytosine (3)
Linoleic acid (3)
Uric acid (3)
Creatinine (3)
Alpha-CEHC (2)
D-Biotin (2)
Epinephrine (2)
Pyrrole-2-carboxylic acid (2)
Linoleoyl ethanolamide (2)
Leucine (2)
Chenodeoxycholic acid (2)
Indole-3-acetaldehyde (2)
Valine (2)
Betaine (2)
Isokobusone (2)
Propionylcarnitine (2)
Sphingosine (2)
Pyroglutamic acid (2)
Nicotinuric acid (2)
Myristoleic acid (2)
Dihydrobiopterin (2)
Kynurenic acid (2)
DL-Dopa (2)
7-Ketocholesterol (2)

Modification

Not available (1)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (15)
ChIP-seq (12)
Methylation profiling by high throughput sequencing (6)
Comparative genomic hybridization by array (3)
Other (3)
Methylation profiling by array (3)
RNA-seq of coding RNA from single cells (3)
RNA-seq of non coding RNA (2)
Cell line - Single-cell sequencing (1)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)

Release Date

2025 (927)
2024 (703)
2022 (677)
2023 (644)
2021 (522)
2020 (375)
2019 (253)
2018 (226)
2017 (196)
2016 (138)
2015 (136)
2026 (127)
2014 (102)
2013 (62)
2012 (48)
2010 (35)
2011 (29)
2009 (18)
2008 (8)
2006 (6)
2005 (4)
2007 (2)
2004 (2)
2003 (1)
2002 (1)
2001 (1)

Lab affiliation

State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
Institute of Immunology and Department of Orthopaedics of the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China (2)
Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
Zhejiang University (2)
+8617812007228 (1)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital (1)
BGI-shenzhen (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive Stanford, CA 94305-5175, USA (1)
Beijing proteome research center, Beijing, China (1)
Center for Translational Medicine, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, 510080, P. R. China. (1)
Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University (1)
Department of Biochemistry and Molecular Cell Biology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Shanghai Jiao Tong University School of Medicine, Shanghai, China (1)
Department of Cancer Biology, Dana-Farber Cancer Institute Department of Cell Biology, Harvard Medical School (1)
Department of Gastroenterology, The First Affiliated Hospital of Naval Medical University, Shanghai, 200433, China (1)
Department of General Surgery & Guangdong Provincial Key Laboratory of Precision Medicine for Gastrointestinal Tumor, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong, China; Cancer Center of Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua Medicine, Tsinghua University, Beijing, China (1)
Department of Orthopedics, The Second Xiangya Hospital, Central South University, Changsha, China (1)
Department of Pathophysiology, School of Basic Medicine, Key Laboratory of Ministry of Education of China for Neurological Disorders, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Pediatrics Dr. von Hauner Children’s Hospital University Hospital LMU Munich Lindwurmstr. 4 80337 Munich, Germany (1)
Department of Pharmaceutical Sciences, Utrecht University (1)
Department of Urology, Second Affiliated Hospital, Army Medical University, Chongqing 400037, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Gansu Key Laboratory of Biomonitoring and Bioremediation for Environmental Pollution, School of Life Sciences, Lanzhou University, Lanzhou, China (1)
Henan agricultural university, China (1)
Huazhong University of Science and Technology, China (1)
Hubei Collaborative Innovation Center for Grain Industry/ Research Center of Crop Stresses Resistance TechnHubei Collaborative Innovation Center for Grain Industry/ Research Center of Crop Stresses Resistance TechnHubei Collaborative Innovation Center for Grain Industry/ Research Center of Crop Stresses Resistance Technologies, Yangtze University, Jingzhou 434025, China;ologies, Yangtze University, Jingzhou 434025, China;ologies, Yangtze University, Jingzhou 434025, China; (1)
Institute of Systems Biomedicine, Peking University Health Science Center, Beijing 100191, China. (1)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, 510275, Guangzhou, Guangdong, China. (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China (1)

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Protocol for a parallel assignment prospective, randomised, comparative trial to evaluate the safety and efficacy of intense pulsed light (IPL) combined with 3% diquafosol (DQS) ophthalmic solution in dry eye syndrome.

Not available

S-EPMC10465902 | biostudies-literature

Salt/NaCl stress in Desulfovibrio vulgaris Hildenborough

This set of microarray data was used to investigate the effects of D. vulgaris adaptation to excess NaCl. Keywords: stress response, one time point (the mid-log phase for both control and treated cells) Comparison of cells treated with 250 Salt:NaCl to untreated cells at times of mid-log phase min.

ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough

2010-04-11 | E-GEOD-14343 | biostudies-arrayexpress

Effects of zirconium element on the microstructure and deuterium retention of W-Zr/Sc2O3 composites.

Not available

S-EPMC5011696 | biostudies-literature

Relationship between ocular surface pain and corneal nerve loss in dry eye diabetics: a cross-sectional study in Shenyang, China.

Not available

S-EPMC10533686 | biostudies-literature

Factors of the HIV Transmission in Men Who Have Sex with Men in Suizhou City from 2009 to 2013.

Not available

S-EPMC4380911 | biostudies-literature

NaCl Stress in Desulfovibrio vulgaris Hildenborough (Series 1)

Increased salinity constitutes an important and frequent fluctuation faced by D. vulgaris in its natural habitat. Using data from microarray experiments, we investigated the effects of excess NaCl on D. vulgaris. Keywords: stress response, time course Comparison of cells treated with 250mM NaCl to u...

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2006-03-21 | E-GEOD-4504 | biostudies-arrayexpress

NaCl Stress in Desulfovibrio vulgaris Hildenborough (Series 2)

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2010-06-11 | E-GEOD-4510 | biostudies-arrayexpress

KCl Stress in Desulfovibrio vulgaris Hildenborough (Series 1)

Increased salinity constitutes an important and frequent fluctuation faced by D. vulgaris in its natural habitat. Using data from microarray experiments, we investigated the effects of excess KCl on D. vulgaris. Keywords: stress response, time course Comparison of cells treated with 250mM KCl to unt...

ORGANISM(S): Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

2010-06-11 | E-GEOD-4515 | biostudies-arrayexpress

He Xiang - BfrB - Systematic Identification of Mycobacterium tuberculosis Effectors Reveals that BfrB Suppresses Innate Immunity

To identify the macrophage binding partner of Mtb BfrB, we selected and purified BfrB tagged with GST, and incubated it with THP-1 lysates before performing GST Pullodwn. Then the eluted protein were examined by sliver stain. Using mass spectrometry, we identified a protein with an apparent molecula...

ORGANISM(S): Homo sapiens (Human) Mycobacterium tuberculosis

2017-10-17 | PXD006929 | Pride

Bfrb rps3

Paraphlomis kuankuoshuiensis (Lamiaceae), a new species from the limestone areas of northern Guizhou, China.

Not available

S-EPMC6976690 | biostudies-literature

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5453 Results

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