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ProteomicsIdentification of inositol 1,4,5-trisphosphate-binding proteins by heparin-agarose affinity purification and LTQ ORBITRAP MS in Oryza sativa
Inositol 1,4,5-trisphosohate (IP3) and its receptors play a pivotal role in calcium signal transduction in mammals. Some fractions of tonoplast and endoplasmic reticulum membranes have high affinity binding activity for IP3, and IP3 can induce Ca2+ release in several plants. However, no homologues o...
ORGANISM(S): Oryza sativa (Rice) 
2014-09-25 | PXD000763 | Pride
Oryza sativa Ip3 Ip3 binding protein Ltq orbitrap ms Heparin-agarose 
ProteomicsThe heparin-binding proteome in nomal pancreas and murine experimental acute pancreatitis, C4PR_LIV
Acute pancreatitis (AP) is an acute inflammation of the pancreas, mainly caused by gallstones and alcohol, and driven by changes in communication between cells. Heparin-binding proteins (HBPs) of the plasma membrane and extracellular matrix play a central role in cell communication. Therefore, we us...
ORGANISM(S): Mus musculus (Mouse) 
2018-12-11 | PXD001950 | Pride
Pancreas Mouse Lcmsms 
ProteomicsHeparin-binding proteome in normal pancreas and murine experimental pancreatitis_C4PR_LIV
Acute pancreatitis (AP) is acute inflammation of the pancreas, mainly caused by gallstones and alcohol, driven by changes in communication between cells. Heparin-binding proteins (HBPs) play a central role in cell communication. Therefore, we used heparin affinity proteomics to identify extracellula...
ORGANISM(S): Mus musculus (Mouse) 
2018-12-17 | PXD012039 | Pride
Murine Pancreatitis Heparin-binding proteins (hbps) 
ProteomicsStructural determinants of heparinâ??transforming growth factor-β1 interactions and their effects on signalling
Transforming growth factor-Ã?1 (TGF-Ã?1, Uniprot: P01137) is a heparin-binding protein that has been implicated in a number of physiological processes, including the initiation of chondrogenesis by human mesenchymal stem cells (hMSCs). Here, we identify the molecular features in the protein and in...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-07-19 | MSV000079921 | MassIVE
GenomicsThe Heparin-binding hemagglutinin protein of Mycobacterium tuberculosis is a nucleoid-associated protein
The Heparin-binding hemagglutinin protein of Mycobacterium tuberculosis is a nucleoid-associated protein
PRJNA985662 | ENA
ProteomicsProteomics-based screening of the endothelial heparan sulfate interactome reveals CLEC14A as a heparin binding protein
We report a novel proteomics workflow for the identification and characterization of membrane-anchored and extracellular proteins that bind to heparin. The technique is based on Limited Proteolysis of live cells in the absence of denaturation and fixation, Heparin-Affinity chromatography, and high-r...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2019-10-27 | MSV000084510 | MassIVE
UnknownHeparin activation of protein Z-dependent protease inhibitor (ZPI) allosterically blocks protein Z activation through an extended heparin-binding site.
Not available
S-EPMC9190012 | biostudies-literature
ProteomicsProteomics-based screening of the endothelial heparan sulfate interactome reveals that C-type lectin 14a (CLEC14A) is a heparin binding protein
Animal cells express heparan sulfate proteoglycans that perform many important cellular functions by way of heparan sulfate-protein interactions. The identification of membrane heparan-sulfate binding proteins is challenging because of their low abundance and the need for extensive enrichment. Here,...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2020-01-09 | MSV000084782 | MassIVE
UnknownStructural basis of heparin binding to camel peptidoglycan recognition protein-S.
Not available
S-EPMC3325777 | biostudies-literature
TranscriptomicsGene expression responses of mouse neural cells to heparin-binding growth factors
The general area of research interests of my lab is the glycobiology of HSPGs in cell-cell/cell-matrix interactions and growth factor signalling. Heparan sulfate binding proteins in neural development and differentiation. We used the Glyco-gene Chips to study the gene expression responses of mouse n...
ORGANISM(S): Mus musculus 
2010-12-11 | E-GEOD-26010 | biostudies-arrayexpress
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