Heterotrophs - OmicsDI

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Unknown (397)
Genomics (201)
Proteomics (18)
Metabolomics (7)
Transcriptomics (6)

Organisms

Bombyx mori (14)
Onchocerca volvulus (14)
Klebsiella pneumoniae (14)
Musca domestica (14)
Brugia malayi (14)
Schizosaccharomyces pombe (14)
Cnidaria (14)
Streptomyces coelicolor A3(2) (14)
Sus scrofa (14)
Human immunodeficiency virus 1 (14)
Oryza sativa Indica Group (14)
Sinorhizobium meliloti BL225C (14)
Vitis (14)
Sus scrofa domesticus (14)
Ostreococcus tauri (14)
Saccharomyces cerevisiae (14)
Synechocystis sp. PCC 6803 (14)
Olavius algarvensis Gamma 1 endosymbiont (14)
Vitis vinifera (14)
Saccharopolyspora erythraea (14)
Staphylococcus aureus (14)
Rattus norvegicus (14)
Rattus rattus (14)
Nitrospina gracilis Nb-211 (2)
Porphyrobacter sp. ULC335 (1)
Shewanella sp. W3-18-1 (1)
phototrophic enrichment culture UCC-O (1)
Picosynechococcus sp. PCC 7002 (1)
Escherichia coli W (1)
marine metagenome (1)

Organisms

algae metagenome (64)
synthetic metagenome (35)
biocrust metagenome (5)
soil metagenome (4)
marine metagenome (3)
groundwater metagenome (2)
uncultured bacterium (2)
marine sediment metagenome (2)
bioreactor metagenome (2)
phototrophic enrichment culture UCC-O (1)
Moorena bouillonii PNG (1)
Moorena producens JHB (1)
Porphyrobacter sp. ULC335 (1)
Rhabdomonas costata (1)
Escherichia coli W (1)
Thermotoga maritima (1)
Candidatus Nitrotoga sp. (1)
Nitzschia sp. IriIs04 (1)
Caulobacteraceae (1)
bacterium enrichment culture (1)
Thermococcus kodakarensis (1)
Aurantiochytrium limacinum ATCC MYA-1381 (1)
coral metagenome (1)
aquatic metagenome (1)
microbial mat metagenome (1)

Repository

ENA (201)
pride (14)
MetaboLights (5)
geo (4)
MassIVE (3)
biostudies-arrayexpress (2)
GNPS (2)
iProX (1)

Tissue

Cell suspension culture (2)
Cell line cell (2)
Pancreas (1)
Photosynthetic cell (1)
Spleen (1)
Cell culture (1)

Disease

Disease free (2)

Technology Type

Mass Spectrometry (14)
Shotgun proteomics (8)
Mass spectrometry (4)
Data-dependent acquisition (4)
Bottom-up proteomics (4)
NMR spectroscopy (2)
Proteogenomics (1)

Instrument Platform

MaXis (2)
Q Exactive (2)
Nuclear Magnetic Resonance (NMR) - (2)
LTQ Orbitrap Elite (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - - reverse phase (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2024 (7)
2020 (7)
2022 (4)
2021 (4)
2013 (2)
2026 (2)
2023 (2)
2010 (1)
2017 (1)
2014 (1)

CHEBI ID

CHEBI:26271 (2)
CHEBI:28300 (2)
CHEBI:27266 (2)
CHEBI:50677 (1)
CHEBI:156381 (1)
CHEBI:55555 (1)
CHEBI:94514 (1)
CHEBI:30843 (1)
CHEBI:38959 (1)
CHEBI:137713 (1)
CHEBI:72698 (1)
CHEBI:17281 (1)
CHEBI:5159 (1)
CHEBI:71689 (1)
CHEBI:60114 (1)
CHEBI:16834 (1)
CHEBI:77812 (1)
CHEBI:141212 (1)
CHEBI:27467 (1)
CHEBI:29568 (1)
CHEBI:17535 (1)
CHEBI:16943 (1)
CHEBI:16369 (1)
CHEBI:82474 (1)
CHEBI:90761 (1)
CHEBI:140287 (1)
CHEBI:2164 (1)
CHEBI:73108 (1)
CHEBI:6859 (1)
CHEBI:1010 (1)

Metabolite Name

Isethionate (1)
4-amino-5-hydroxymethyl-2-methylpyrimidine (1)
Adenosine 3'-monophosphate (1)
Alpha-D-glucose (1)
2-O-(alpha-D-glucopyranosyl)-D-glycerate (1)
Trehalose (1)
Beta-D-glucose (1)
S-(1,2-dicarboxyethyl)glutathione (1)
Acetic acid (1)
Homoserine (1)
Syringic acid (1)
Pantothenic acid (1)
Glucose 6-phosphate (1)
Ciliatine (1)
Adenosine 5'-monophosphate (1)
Gluconate (1)
D-glucose (1)
2,3-Dihydroxypropane-1-sulfonate (1)
Xanthosine (1)
Thymidine (1)
Proline (1)
Gamma-aminobutyric acid (1)
Citrulline (1)
Aspartate (1)
Asparagine (1)
Xanthine (1)
Phenylalanine (1)
Threonine (1)
Ornithine (1)
Alanine (1)

First Public Date

2020 (64)
2025 (46)
2026 (27)
2023 (10)
2024 (9)
2021 (9)
2022 (7)
2018 (7)
2019 (6)
2013 (5)
2017 (4)
2016 (3)
2015 (3)
2014 (1)

Classification

bacteria (1)

Study type

Unknown experiment type (1)
RNA-seq of coding RNA (1)

Release Date

2021 (48)
2022 (39)
2024 (34)
2025 (33)
2018 (27)
2023 (26)
2019 (26)
2020 (23)
2016 (23)
2015 (23)
2017 (19)
2013 (16)
2014 (11)
2012 (9)
2011 (8)
2009 (7)
2008 (4)
2007 (4)
2006 (4)
2001 (4)
2010 (3)
2005 (2)
2003 (2)
1998 (2)
2004 (1)
2000 (1)

Lab affiliation

University of Calgary (3)
Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA (2)
BBSRC Discovery Fellow & BMC Microbiome Managing Editor Arthur Willis Environmental Research Centre University of Sheffield Sheffield S10 1AE (1)
Molecular Biology and Lewis-Sigler Institute for Intergrative Genomics, Princeton University, USA (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany (1)
Oceanography, University of Washington, USA (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany (1)
Energy Bioengineering and Geomicrobiology Group, Department of Geoscience, University of Calgary (1)
Xiamen University (1)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Pacific Northwest National Laboratory (1)

629 Results

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