Hff cells - OmicsDI

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CHEBI ID

CHEBI:141588 (3)
CHEBI:7916 (3)
CHEBI:65294 (2)
CHEBI:65302 (2)
CHEBI:65301 (2)
CHEBI:42111 (2)
CHEBI:24266 (2)
CHEBI:27997 (2)
CHEBI:64525 (2)
CHEBI:64516 (2)
CHEBI:66848 (2)
CHEBI:65303 (2)
CHEBI:16113 (2)
CHEBI:44215 (2)
CHEBI:16856 (2)
CHEBI:18237 (2)
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CHEBI:7676 (2)
CHEBI:28867 (2)
CHEBI:16668 (2)
CHEBI:17311 (2)
CHEBI:28875 (2)
CHEBI:16958 (2)
CHEBI:15741 (2)
CHEBI:37024 (2)
CHEBI:16865 (2)
CHEBI:17929 (2)
CHEBI:17549 (2)
CHEBI:15891 (2)
CHEBI:18183 (2)

Metabolite Name

Beta-Nicotinamide adenine dinucleotide (2)
Malonyl-coa (1)
PC 40:6|PC 18:1_22:5 (1)
PC 38:4|PC 18:1_20:3 (1)
PC 33:1|PC 17:0_16:1 (1)
PC 31:1|PC 15:0_16:1 (1)
PC 31:0|PC 14:0_17:0 (1)
PC 29:0|PC 14:0_15:0 (1)
S-Hydroxymethylglutathione (1)
PC 32:2|PC 16:1_16:1 (1)
Glutathione (reduced) (1)
LPI 16:0 (1)
PG 38:4 (1)
PI 40:6 (1)
PI 40:4 (1)
PI 38:5 (1)
PI 38:4 (1)
PI 36:4 (1)
PE 40:1 (1)
PE 38:1 (1)
PS 42:2 (1)
PS 42:1 (1)
PS 40:6 (1)
PS 40:5 (1)
PS 40:4 (1)
PS 40:3 (1)
PS 38:6 (1)
PS 38:5 (1)
PS 38:4 (1)
PS 38:3 (1)

First Public Date

2014 (36)
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2016 (5)
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2015 (4)
2018 (3)
2013 (3)

Classification

protozoa (9)

Modification

15.994915 (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (35)
Transcription profiling by tiling array (20)
RNA-seq of coding RNA (8)
Comparative genomic hybridization by array (3)
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CUT&RUN (1)
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Release Date

2012 (21)
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2020 (16)
2014 (13)
2010 (12)
2024 (12)
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2003 (1)
1998 (1)

Lab affiliation

Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (4)
EDyP (3)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute for Biomedical Research (2)
Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet SE 17177 Stockholm, Sweden. Department of Pharmacological & Technological Chemistry, I.M. Sechenov First Moscow State Medical University, Moscow, 119146, Russia. (2)
Department of Biochemistry, University of Cambridge, UK (2)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and the Whitehead Institute for Biomedical Research (1)
Associate Professor, Whitehead Institute for Biomedical Research and Massachusetts Institute of Technology (1)
CIISA - Centro de Investigação Interdisciplinar em Sanidade Animal, Faculdade de Medicina Veterinária, Universidade de Lisboa, Lisboa, Portugal (1)
CNRS UMR 7178 IPHC-DSA-LSMBO (1)
CSIR- Centre for Cellular and Colecular Biology (CCMB), Hyderabad, 500007, India (1)
College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, Hubei, PR China (1)
Department of Biochemistry and Biophysics Smilow Center for Translational Research Perelman School of Medicine University of Pennsylvania Room 9-124 (office) 3400 Civic Center Blvd Philadelphia, PA 19104 215-573-9423 (office) (1)
Department of Experimental Parasitology LMU MÃ¼nchen Lena-Christ-Str. 48 82152 Planegg-Martinsried Telefon: +49 (0) 89 2180 - 3622 Fax: +49 (0) 89 2180 - 3623 E-Mail: markus.meissner@lmu.de (1)
Department of Internal Medicine I Division of Infectious Diseases Medical University of Vienna, Austria (1)
Department of Internal Medicine I Division of Infectious Diseases, Medical University of Vienna, Austria (1)
Department of Molecular Biology, Cristea Lab, Princeton University, Princeton, NJ, US (1)
Department of Molecular Biology, Cristea Lab, Princeton University, USA (1)
Department of Molecular Biology, Princeton University, USA (1)
Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA USA Division of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, PA USA (1)
Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17 177 Stockholm, Sweden SciLIfeLab, SE-17 177 Stockholm, Sweden Department of Pharmacological & Technological Chemistry, I.M. Sechenov First Moscow State Medical University, Moscow, 119146, Russia (1)
Dr Andreas Pichlmair, Prof. Andreas Pichlmair, Technical University Munich, Faculty of Medicine, Institute of Virology, Viral Immunopathology, Schneckenburger Str. 8, D-81675 Munich, Germany (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)
Institute for Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham B15 2TT UK (1)
Institute for Virology and Immunobiology, Julius-Maximilians-University Würzburg, Versbacher Straße 7, 97078 Würzburg, Germany (1)
Institute of Virology, Technische Universität München, Germany (1)
Laboratório de regulação da expressão gênica, Instituto Carlos Chagas, Fiocruz - Paraná (1)
Leibniz-Institut für Molekulare Pharmakologie (FMP) (1)
Molecular Biology Department at Princeton University (1)
Novo Nordisk Foundation Center for Protein Research (1)
Pharmaceutical Biotechnologu, Faculty of Pharmaceutical Biotechnology, Ghent University, Belgium (1)

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The comparison of exosomal miRNAs from ECM or media derived from HFF-CBD-Lamp2b cells, HFF cells, HFF-Lamp2b cells and hUCMSCs

The next-generation sequencing technology was used to investigate the difference of RNAs content among the different types of exosomes from the media of HFF cells, HFF-Lamp2b cells and hUCMSCs, and from the ECM of HFF-CBD-Lamp2b cells

ORGANISM(S): Homo sapiens

2021-10-12 | E-MTAB-10905 | biostudies-arrayexpress

The comparison of exosomal miRNAs from ECM or media derived from HFF-CBD-Lamp2b cells, HFF cells, HFF-Lamp2b cells and hUCMSCs

PRJEB48070 | ENA

Genome-wide analysis of gene expression response upon infection with Toxoplasma gondii

The in vitro effect of infection with different strains of Toxoplasma gondii was tested 24 hours after infection of Human Foreskin Fibroblasts (HFF) The strains tested include RH, VEG, and transgenic strains of RH overexpressing ROP38 or ROP21 Total RNA of Toxoplasma gondii infected HFF cell was com...

ORGANISM(S): Homo sapiens

2010-07-31 | E-GEOD-22402 | biostudies-arrayexpress

Mock or latently infected KSHV cells (BCBL, SLK and HFF)

[original title] Mock or latently infected KSHV cells (BCBL, SLK and HFF) vs common reference (mixture of RNA from both infected and uninfected cells). Expression profiling of latently infected cells using a custom tiling microarray. SLK and HFF cells were infected and selected for rKSHV.219. Mock ...

ORGANISM(S): Homo sapiens

2010-06-05 | E-GEOD-20443 | biostudies-arrayexpress

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 using TileShuffle

This SuperSeries is composed of the following subset Series: GSE36162: Expression analysis of HFF cells in G0 phase [TileShuffle] GSE36163: Expression analysis of HFF cells in G1 phase [TileShuffle] GSE36164: Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [TileShuf...

ORGANISM(S): Homo sapiens

2012-06-05 | E-GEOD-36190 | biostudies-arrayexpress

Mock or latently infected KSHV cells (BCBL, SLK and HFF)

PRJNA125033 | ENA

Expression and differential expression analysis of HFF cells in G0 phase compared to cells in G1 using nONCOchip 2.0 array

Expression and differential expression analysis of long non-coding RNAs and protein-coding genes. HFF cells were synchronised by serum starvation and reside in G0 phase or G1 phase of mitotic cell cycle. We analyzed three arrays each for HFF cells in G0 phase and cells in G1 phase

ORGANISM(S): Homo sapiens

2015-01-23 | E-GEOD-61006 | biostudies-arrayexpress

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 using MAT

This SuperSeries is composed of the following subset Series: GSE36154: Expression analysis of HFF cells in G0 phase [MAT] GSE36155: Expression analysis of HFF cells in G1 phase [MAT] GSE36156: Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [MAT] Refer to individual...

ORGANISM(S): Homo sapiens

2012-06-05 | E-GEOD-36187 | biostudies-arrayexpress

Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [TileShuffle]

Whole transcriptome differential expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide changes occurring at the transition from G0 phase to G1 phase detected. Expression data and fold changes were processed with ...

ORGANISM(S): Homo sapiens

2012-12-18 | E-GEOD-36164 | biostudies-arrayexpress

Expression analysis of HFF cells in G0 phase [TileShuffle]

Whole transcriptome expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide expression in G0 phase. Expression data were processed with our new permutation approach TileShuffle. We analyzed one Affymetrix Human Til...

ORGANISM(S): Homo sapiens

2012-12-18 | E-GEOD-36162 | biostudies-arrayexpress

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