Hoffman K K - OmicsDI

Show results for

Unknown (1847)
Transcriptomics (43)
Genomics (19)
Proteomics (17)
Metabolomics (11)

Organisms

Homo sapiens (41)
Alphavirus (15)
Archaea (15)
Bacteria (15)
Betaherpesvirinae (15)
Borrelia (15)
Botrytis cinerea (15)
Candida albicans (15)
Clostridium perfringens (15)
Eukaryota (15)
Fungi (15)
Hepatitis B virus (15)
Human betaherpesvirus 5 (15)
Influenza A virus (15)
Influenza C virus (15)
Japanese encephalitis virus group (15)
Mammarenavirus (15)
Miscanthus x giganteus (15)
Mus musculus (15)
Mycobacterium tuberculosis (15)
Orthoflavivirus (15)
Panicum virgatum (15)
Mus musculus (8)
Saccharomyces cerevisiae (3)
Sus scrofa (3)
Rattus norvegicus (2)
Apis mellifera (1)
Schizosaccharomyces pombe (1)
Plasmodium falciparum (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (45)
EGA (17)
pride (15)
MetaboLights (10)
MassIVE (2)
GNPS (1)

Tissue

Cell culture (3)
T cell (2)
Blood (1)
Blood cell (1)
Brain (1)
Cell suspension culture (1)
Epididymal white adipose tissue (1)
Megakaryocyte (1)
Urine (1)

Disease

Burkitt's lymphoma (1)
Normal (1)
Neurodevelopmental delay (1)

Technology Type

Mass Spectrometry (15)
Mass spectrometry (9)
Bottom-up proteomics (6)
Shotgun proteomics (6)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
All-ion fragmentation (1)
Data-independent acquisition (1)
DiaPASEF (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
MA900, Sony (2)
10x Chromium Controller (2)
Illumina NovaSeq 6000 (2)
GenePix 4000B [Axon Instruments] (1)
Illumina NovaSeq X (1)
DNBSEQ-G400 (1)
NextSeq 500 (1)
LTQ FT (1)
MaXis (1)
Q Exactive (1)
QE+ (1)
Flame ionisation detector MS - (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2023 (12)
2007 (8)
2010 (6)
2026 (5)
2015 (5)
2025 (4)
2022 (3)
2021 (3)
2014 (3)
2013 (3)
2012 (3)
2011 (3)
2008 (3)
2024 (3)
2016 (2)
2006 (2)
2009 (1)
2005 (1)
2004 (1)
2017 (1)
2019 (1)

CHEBI ID

CHEBI:16359 (3)
CHEBI:35038 (3)
CHEBI:28865 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:182784 (2)
CHEBI:143745 (2)
CHEBI:139138 (2)
CHEBI:173703 (2)
CHEBI:27997 (2)
CHEBI:75342 (2)
CHEBI:73858 (2)
CHEBI:16010 (2)
CHEBI:80774 (2)
CHEBI:64563 (2)
CHEBI:18012 (2)
CHEBI:34687 (2)
CHEBI:30769 (2)
CHEBI:34494 (2)
CHEBI:15741 (2)
CHEBI:32816 (2)
CHEBI:30915 (2)
CHEBI:18257 (2)
CHEBI:16196 (2)
CHEBI:27432 (2)
CHEBI:181874 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195269 (1)
CHEBI:75567 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Dibutyl phthalate (DBP) (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Monoolein (2)
Succinate (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
9(10)-EpOME (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
Hexanedioic acid, bis(2-ethylhexyl) ester (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
2-((4R)-4-((3R,5R,6S,9S,10R,13R,14S,17R)-3,6-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA from single cells (4)
Comparative genomic hybridization by array (3)
Other (2)
Methylation profiling by array (2)
ChIP-seq (1)
DNA-seq (1)

Release Date

2022 (176)
2021 (166)
2023 (160)
2024 (156)
2025 (155)
2020 (147)
2019 (128)
2018 (119)
2017 (103)
2015 (97)
2016 (91)
2014 (89)
2012 (53)
2011 (53)
2013 (48)
2010 (45)
2009 (27)
2008 (25)
2026 (20)
2007 (14)
2006 (6)
2001 (4)
2002 (3)
2000 (3)
2005 (2)
2004 (2)

Lab affiliation

Molecular Genetics, RPTU Kaiserslautern, Germany (2)
95 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Université Toulouse III - Paul Sabatier (UT3), Toulouse, 31077, France (1)
Associate Professor of Biochemistry Schulich School of Medicine and Dentistry Scientist, Children’s Health Research Institute (CHRI) Medical Sciences Building 358 Western University London, Ontario N6A 5C1, Canada (1)
Biomedical Center, LMU Munich Molecular Biology Großhaderner Strasse 9 82152 Planegg-Martinsried Phone: (089) 2180 75420 (1)
Cologne Excellence Cluster on Cellular Stress Responses in Ageing-Associated Diseases (CECAD), Center for Molecular Medicine Cologne (CMMC), and Institute for Mitochondrial Diseases and Ageing, Medical Faculty, University of Cologne D-50931 Cologne, Germany. (1)
Department of Biochemistry, The University of Western Ontario, London, Ontario, Canada (1)
Department of Biochemistry, The University of Western Ontario, London, Ontario, Canada. (1)
Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA (1)
Department of Pharmaceutical Sciences, School of Pharmacy and Pharmaceutical Sciences, Binghamton University – SUNY, Johnson City, New York 13790, United States (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
Laboratory of Genetics, The Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA. (1)
Senior Lecturer in Transfusion Medicine / Consultant Haematologist, University of Cambridge / NHS Blood and Transplant, Wellcome-MRC Cambridge Stem Cell Institute, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Puddicombe Way, Cambridge, CB2 0AW, United Kingdom (1)
Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald (1)
institute parasitology, University of veterinary medicine vienna, Veterinärplatz 1, 1210 vienna, austria (1)