Hoffmann Per P - OmicsDI

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Unknown (303)
Transcriptomics (62)
Proteomics (37)
Metabolomics (24)
Genomics (8)

Organisms

Allexis (34)
Arabidopsis thaliana (34)
Callinectes sapidus (34)
Ctenopharyngodon idella (34)
Danio rerio (34)
Drosophila (34)
Drosophila melanogaster (34)
Ensifer adhaerens (34)
Entamoeba histolytica (34)
Escherichia coli (34)
Leishmania major strain Friedlin (34)
Listeria monocytogenes (34)
Medicago truncatula (34)
Methylohalobius crimeensis 10Ki (34)
Mus musculus (34)
Mycobacterium tuberculosis (34)
Oryza sativa Indica Group (34)
Physcomitrium patens (34)
Homo sapiens (31)
Mus musculus (19)
Danio rerio (4)
Solanum tuberosum (3)
Saccharomyces cerevisiae (3)
Rattus norvegicus (2)
Drosophila melanogaster (2)
Porphyromonas gingivalis (1)
Bacillus subtilis (1)
Staphylococcus aureus (1)
Sus scrofa (1)
Dermatophagoides pteronyssinus (1)

Repository

biostudies-arrayexpress (66)
pride (34)
MetaboLights (24)
EGA (4)
MassIVE (1)
PanoramaPublic (1)
PAXDB (1)

Tissue

Cell culture (11)
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Root (2)
Brain (1)
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Fetal cell line (1)
HEK-293T cell (1)
Heart (1)
Lung (1)
Myoblast maturation (1)
Pancreas (1)
Plant cell (1)
Proliferating skeletal muscle satellite cell (1)
Prostate adenocarcinoma cell (1)
Skin (1)

Disease

Peripheral neuropathy (1)
Atherosclerosis (1)
Malignant neoplasm of ovary (1)
Prostate cancer (1)
Spinal muscular atrophy (1)

Technology Type

Mass Spectrometry (34)
Mass spectrometry (20)
Shotgun proteomics (16)
Affinity purification coupled with mass spectrometry proteomics (6)
Bottom-up proteomics (6)
Data-dependent acquisition (4)
Data-independent acquisition (4)
Mass spectrometry assay (3)
Gel-based experiment (2)
SWATH MS (2)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
NMR spectroscopy (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - negative - reverse phase (9)
Direct infusion MS - negative (4)
Direct infusion MS - positive (3)
Illumina HiSeq 1500 (2)
NextSeq 500 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
KingFisher Flex (1)
GentleMACS™ Dissociator (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Q Exactive (1)
SYNAPT G2 HDMS (Waters) (1)
Thermo Trace GC PolarisQ (1)
Flow injection analysis MS - negative (1)
Autoflex speed smartbeam (1)
Pegasus 4D (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2014 (17)
2025 (15)
2023 (11)
2013 (10)
2015 (9)
2021 (7)
2020 (7)
2012 (7)
2011 (7)
2024 (6)
2019 (6)
2016 (6)
2010 (4)
2026 (4)
2007 (3)
2018 (2)
2008 (2)
2022 (2)
2009 (1)

UNIPROT ID/AC

14310_ARATH (1)
14311_ARATH (1)
14312_ARATH (1)
14332_ARATH (1)
14333_ARATH (1)
14334_ARATH (1)
14335_ARATH (1)
14336_ARATH (1)
14337_ARATH (1)
14338_ARATH (1)
14339_ARATH (1)
1A110_ARATH (1)
1A112_ARATH (1)
1MMP_ARATH (1)
2A5B_ARATH (1)
2A5G_ARATH (1)
2A5Z_ARATH (1)
2AAA_ARATH (1)
2AAB_ARATH (1)
2AAG_ARATH (1)
2AB2A_ARATH (1)
2ABA_ARATH (1)
2ABB_ARATH (1)
2SS1_ARATH (1)
2SS2_ARATH (1)
2SS3_ARATH (1)
2SS4_ARATH (1)
2SS5_ARATH (1)
3702.AT1G29920.1 (1)
3702.AT1G49610.1 (1)

CHEBI ID

CHEBI:28125 (4)
CHEBI:16335 (4)
CHEBI:88345 (3)
CHEBI:46905 (3)
CHEBI:34151 (3)
CHEBI:28666 (3)
CHEBI:17822 (3)
CHEBI:16856 (3)
CHEBI:16708 (3)
CHEBI:16750 (3)
CHEBI:72651 (3)
CHEBI:19138 (3)
CHEBI:72639 (3)
CHEBI:64017 (3)
CHEBI:72606 (3)
CHEBI:15555 (3)
CHEBI:15551 (3)
CHEBI:28044 (3)
CHEBI:16865 (3)
CHEBI:17509 (3)
CHEBI:72783 (3)
CHEBI:17203 (3)
CHEBI:72605 (3)
CHEBI:18050 (3)
CHEBI:15843 (3)
CHEBI:28364 (3)
CHEBI:28728 (3)
CHEBI:15971 (3)
CHEBI:16704 (3)
CHEBI:16015 (3)

Metabolite Name

9-HODE (4)
12-HEPE (4)
12-HETE (4)
13-HODE (4)
Tetranor-12-HETE (3)
AA (3)
Alpha-LA (3)
Geniposidic acid (3)
DHA (3)
Resolvin D1 (3)
TXB2 (3)
11-HDoHE (3)
12-HHTrE (3)
9-HEPE (3)
9-HETE (3)
EPA (3)
Resolvin D2 (3)
5-HEPE (3)
D-Fructose (3)
Gamma-Glutamyl-beta-cyanoalanine (3)
10-HDoHE (3)
8-HETE (3)
15-HEPE (3)
15-HETE (3)
5-HETE (3)
16-HDoHE (3)
8-HDoHE (3)
11-HETE (3)
PGD2 (3)
PGE2 (3)

Study type

Transcription profiling by array (40)
RNA-seq of coding RNA (9)
ChIP-seq (4)
Methylation profiling by array (3)
Genotyping by array (2)
Transcription profiling by RT-PCR (2)
Other (2)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
RNA-seq of total RNA (1)

Release Date

2023 (43)
2022 (38)
2020 (36)
2021 (30)
2017 (27)
2019 (25)
2015 (23)
2024 (22)
2014 (22)
2016 (19)
2025 (19)
2018 (14)
2013 (14)
2011 (13)
2012 (9)
2010 (5)
2007 (3)
2026 (3)
2009 (2)
2008 (1)
2006 (1)

Lab affiliation

Institute of Virology - Viral Immunopathology, Faculty of Medicine, Technical University Munich (4)
Department Molecular Toxicology, Helmholtz Centre for Environmental Research GmBH - UFZ (2)
Clinical Cooperation Unit Neurooncology B320 German Cancer Research Center Heidelberg (1)
Clinical and Health Sciences, Mass Spectrometry and Proteomics facility, University of South Australia, Adelaide, Australia (1)
Clinical proteomics facility, Medical Biochemistry, Academic Medical Center, University of Amstedam (1)
D345, Cell Cycle and Carcinogenesis, Deutsches Krebsforschungszentrum Heidelberg (1)
Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 | 04318 Leipzig (1)
Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, Debrecen, Egyetem Ter 1, 4032 Hungary (1)
Department of Biochemistry and Molecular Biology, Faculty of Meicine, University of Debrecen, Debrecen, Egyetem Ter 1, 4032 Hungary (1)
Department of Molecular Sciences, Macquarie University, Sydney, Australia (1)
Department of Neurology and Neurooncology Program of the National Center for Tumor Diseases, Heidelberg University Hospital, Germany (1)
Director Adelaide Proteomics Centre, School of Biological Sciences Deputy Director, The Institute for Photonics & Advanced Sensing (IPAS), School of Physical Sciences The University of Adelaide Adelaide, South Australia, Australia, 5005 (1)
ETH Zurich (1)
ETH Zürich Institute of Molecular Systems Biology Otto-Stern-Weg 3 8093 Zürich Switzerland (1)
German Cancer Research Center (DKFZ) (1)
Head of the Division of Systems Biology, Department of Protein Science, at the Royal Institute of Technology (KTH), Stockholm, Sweden (1)
Institute for Clinical Chemistry and Pathobiochemistry, Department for Diagnostic Laboratory Medicine, University Hospital Tübingen, Tübingen, Germany (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany. (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany. Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Max-von-Laue Straße 15, 60438 Frankfurt am Main, Germany. Fraunhofer Institute of Translational Medicine and Pharmacology, Carl-von-Noorden-Platz 9, 60596 Frankfurt am Main, Germany (1)
Institute of Biochemistry II, Goethe University School of Medicine, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany (1)
Institute of Biochemistry II, Goethe University School of Medicine, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Riedberg Campus, Max-von-Laue-Straße 15, 60438 Frankfurt am Main, Germany (1)
Institute of Microbiology, University of Greifswald, Felix-Hausdorff-Strasse 8, 17489 Greifswald, Germany (1)
Institute of Molecular Plant Biology (IMPB), Department of Biology, ETH Zurich (1)
Institute of Pharmaceutical Chemistry, Goethe University, Max-von-Laue-Str. 9, 60438 Frankfurt am Main, Germany Structural Genomics Consortium (SGC), Buchmann Institute for Life Sciences, Max-von-Laue-Str. 15, 60438 Frankfurt am Main, Germany (1)
Roche Pharma Research and Early Development Roche Innovation Center Basel F. Hoffmann-La Roche Ltd CH-4070 Basel, Switzerland (1)
Section/Core Facility Mass Spectrometry and Proteomics, University Medical Center Hamburg-Eppendorf (UKE), Martinistr. 52, 20246 Hamburg, Germany (1)
Strand Leader BENM, Lloyd Sansom Chair Future Industries Institute, UniSA (1)
Technical University of Munich, School of Medicine, Institute of Virology, 81675 Munich, Germany (1)
University of Victoria (1)
University of Vienna Department of Analytical Chemistry (1)

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Tocilizumab Patterns of Use, Effectiveness, and Safety in Patients with Rheumatoid Arthritis: Final Results from a Set of Multi-National Non-Interventional Studies.

Not available

S-EPMC6513939 | biostudies-literature

A Systematic Review of the Clinical Efficacy of Treatments in Relapsed or Refractory Diffuse Large B Cell Lymphoma.

Not available

S-EPMC7595978 | biostudies-literature

Cost and Quality of Life of Disability Progression in Multiple Sclerosis Beyond EDSS: Impact of Cognition, Fatigue, and Limb Impairment.

Not available

S-EPMC11362420 | biostudies-literature

A time and motion study of subcutaneous versus intravenous trastuzumab in patients with HER2-positive early breast cancer.

Not available

S-EPMC4799946 | biostudies-literature

Tumor biomarkers and efficacy in patients treated with trastuzumab emtansine + pertuzumab versus standard of care in HER2-positive early breast cancer: an open-label, phase III study (KRISTINE).

Not available

S-EPMC9832665 | biostudies-literature

Pertuzumab, Trastuzumab, and an Aromatase Inhibitor for HER2-Positive and Hormone Receptor-Positive Metastatic or Locally Advanced Breast Cancer: PERTAIN Final Analysis.

Not available

S-EPMC10102835 | biostudies-literature

Atezolizumab plus cabozantinib versus cabozantinib monotherapy for patients with renal cell carcinoma after progression with previous immune checkpoint inhibitor treatment (CONTACT-03): a multicentre, randomised, open-label, phase 3 trial.

Not available

S-EPMC11017728 | biostudies-literature

Evaluation of Serious Infection in Pediatric Patients with Low Immunoglobulin Levels Receiving Rituximab for Granulomatosis with Polyangiitis or Microscopic Polyangiitis.

Not available

S-EPMC8964878 | biostudies-literature

Deep Learning-Based Human Activity Recognition for Continuous Activity and Gesture Monitoring for Schizophrenia Patients With Negative Symptoms.

Not available

S-EPMC7525025 | biostudies-literature

The Legionella-driven PtdIns(4)P gradient at LCV-ER membrane contact sites promotes Vap-, OSBP and Sac1-dependent pathogen vacuole remodeling

The causative agent of Legionnaires’ disease, Legionella pneumophila, governs interactions with host cells by secreting ca. 330 different “effector” proteins. The facultative intracellular bacteria replicate in macrophages and amoeba within a unique compartment, the Legionella-containing vacuole (LC...

ORGANISM(S): Legionella pneumophila subsp. pneumophila str. Philadelphia 1 Dictyostelium discoideum

2023-02-21 | PXD034490 | Pride

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