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TranscriptomicsDifferential transcription of Geobacter sulfurreducens cells growing with Fe(III) oxide or Fe(III) citrate provided as electron acceptor [Fe]
Whole-genome DNA microarray analysis of Geobacter sulfurreducens cells grown on Fe(III)-oxide or Mn(IV)-oxide versus cells grown on soluble Fe(III) citrate indicated that there were significant differences in transcription patterns during growth on the insoluble metal oxides compared to growth on so...
ORGANISM(S): Geobacter sulfurreducens 
2012-12-15 | E-GEOD-42918 | biostudies-arrayexpress
TranscriptomicsAnaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Phenol vs. Benzoate)
Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provide...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-07-19 | E-GEOD-28549 | biostudies-arrayexpress
TranscriptomicsAnaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Acetate)
Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provide...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-07-19 | E-GEOD-30798 | biostudies-arrayexpress
TranscriptomicsAnaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Phenol)
Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provide...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-07-19 | E-GEOD-30799 | biostudies-arrayexpress
TranscriptomicsAnaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Benzoate)
Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provide...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-07-19 | E-GEOD-30801 | biostudies-arrayexpress
TranscriptomicsGoing Wireless: Fe(III) Oxide Reduction without Pili in Geobacter sulfurreducens Strain JS-1
The conductive pili of Geobacter sulfurreducens are essential for optimal extracellular electron transfer to Fe(III) and long-range electron transport through current-producing biofilms. The KN400 strain of G. sulfurreducens reduces poorly crystalline Fe(III) oxide more rapidly than the more extensi...
ORGANISM(S): Geobacter sulfurreducens KN400 
2013-06-18 | E-GEOD-47868 | biostudies-arrayexpress
TranscriptomicsDifferential transcription of Geobacter sulfurreducens cells growing with Mn(IV) oxide or Fe(III) citrate provided as electron acceptor [Mn]
Whole-genome DNA microarray analysis of Geobacter sulfurreducens cells grown on Fe(III)-oxide or Mn(IV)-oxide versus cells grown on soluble Fe(III) citrate indicated that there were significant differences in transcription patterns during growth on the insoluble metal oxides compared to growth on so...
ORGANISM(S): Geobacter sulfurreducens 
2012-12-15 | E-GEOD-42919 | biostudies-arrayexpress
TranscriptomicsCytochromes Associated with Fe(III) Oxide Reduction in the Hyperthermophilic Archaeon Ferroglobus placidus
Differential expression of electron transfer genes during growth with insoluble iron provided as an electron acceptor compared to soluble iron. A four chip study using total RNA recovered from two separate cultures of Ferroglobus placidus DSM 10642 grown with 10 mM acetate provided as electron donor...
ORGANISM(S): Ferroglobus placidus 
2014-10-01 | E-GEOD-59467 | biostudies-arrayexpress
TranscriptomicsExpression analysis of benzoate degradation in the hyperthermophilic archaeon Ferroglobus placidus
Insight into the mechanisms for the anaerobic metabolism of aromatic compounds by the hyperthermophilic archaeon Ferroglobus placidus is expected to improve understanding of the degradation of aromatics in hot (> 80 °C) environments and to identify enzymes that might have biotechnological applicatio...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-01-05 | E-GEOD-26421 | biostudies-arrayexpress
TranscriptomicsAnaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus
This SuperSeries is composed of the following subset Series: GSE28549: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Phenol vs. Benzoate) GSE30798: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Acetate) GSE...
ORGANISM(S): Ferroglobus placidus DSM 10642 
2011-07-19 | E-GEOD-30796 | biostudies-arrayexpress
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