Hong Hong H - OmicsDI

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UNIPROT ID/AC

A1L347 (5)
A2AE15 (5)
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P49759 (1)

ENSEMBL ID

ENSMUSG00000057465 (5)
ENSMUSG00000072849 (5)
ENSMUSG00000076586 (1)
ENSMUSG00000076591 (1)
ENSMUSG00000076695 (1)
ENSMUSG00000094546 (1)
ENSMUSG00000094652 (1)
ENSMUSG00000094930 (1)
ENSMUSG00000096833 (1)
ENSMUSG00000098814 (1)
ENSMUSP00000141097 (1)

CHEBI ID

CHEBI:30769 (18)
CHEBI:16704 (16)
CHEBI:16865 (16)
CHEBI:16335 (15)
CHEBI:28044 (15)
CHEBI:15428 (14)
CHEBI:15741 (14)
CHEBI:17368 (14)
CHEBI:17568 (14)
CHEBI:32816 (14)
CHEBI:15891 (13)
CHEBI:16750 (13)
CHEBI:16919 (13)
CHEBI:17351 (13)
CHEBI:17596 (13)
CHEBI:17992 (13)
CHEBI:30915 (13)
CHEBI:15354 (12)
CHEBI:15756 (12)
CHEBI:16027 (12)
CHEBI:16359 (12)
CHEBI:16708 (12)
CHEBI:17154 (12)
CHEBI:17268 (12)
CHEBI:17750 (12)
CHEBI:18012 (12)
CHEBI:22660 (12)
CHEBI:6650 (12)
CHEBI:33699 (1)
CHEBI:41879 (1)

Metabolite Name

Uridine (10)
Hypoxanthine (9)
Xanthine (9)
Creatine (8)
Glycerophosphocholine (8)
Guanosine (8)
L-Phenylalanine (8)
Adenine (7)
Adenosine (7)
Betaine (7)
Citric acid (7)
Glycine (7)
Glycine (7)
Inosine (7)
L-Arginine (7)
L-Glutamine (7)
L-Proline (7)
L-Tryptophan (7)
Riboflavin (7)
1-Methyladenosine (6)
AMP (6)
Arginine (6)
Creatinine (6)
GMP (6)
Guanine (6)
Histidine (6)
Isoleucine (6)
L-Histidine (6)
L-Leucine (6)
L-Tyrosine (6)

First Public Date

2025 (6)
2022 (6)
2026 (5)
2024 (5)
2019 (5)
2023 (4)
2014 (4)
2020 (3)
2018 (3)
2021 (2)
2015 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (3)
Constraint-based model (2)

Lab affiliation

School of Life Sciences, The Chinese University of Hong Kong (6)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (5)
The Hong Kong University of Science and Technology (4)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST) (3)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST), Hong Kong (3)
Department of Chemistry, The University of Hong Kong (3)
School of Biomedical Sciences and Department of Pathology, School of Clinical Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China (3)
Chemical and Biological Engineering Department, The Hong Kong University of Science and Technology (HKUST) (2)
Chemical and Biological Engineering, Hong Kong University of Science and Technology (HKUST) (2)
Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China. (2)
Department of Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST) (2)
Division of Life Science, The Hong Kong University of Science and Technology (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Division of Nephrology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (2)
Hong Kong University of Science and Technology (2)
Huazhong Agricultural University (2)
Institute of Biophysics, Chinese Academy of Sciences (2)
Institute of genetics and developmental biology (2)
Jinan University (2)
Kobilka Institute of Innovative Drug Discovery, School ofMedicine, The Chinese University of Hong Kong, Shenzhen, China, 518172 (2)
Nanjing University (2)
Prometabio Research Institute, prometabio co., ltd. (2)
School of Life Sciences, The Chinese University of Hong Kong, Hong Kong, China (2)
School of Optometry, The Hong Kong Polytechnic University (2)
Shanghai Jiao Tong University (2)
Shenzhen People’s Hospital (2)
St Jude Children's Research Hospital (2)
St.Jude Children's Research Hospital (2)
State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, China (2)
The Chinese University of Hong Kong (2)

IsPrivate

False (5)

Model Flag

Non Kinetic (1)

Submitter Keywords

FROG (1)

Modification

4x(2)H labeled dimethylated L-lysine (2)

Study type

Transcription profiling by array (291)
RNA-seq of coding RNA (67)
ChIP-seq (22)
Other (10)
RNA-seq of non coding RNA (9)
Transcription profiling by RT-PCR (6)
Methylation profiling by array (6)
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ChIP-chip by tiling array (5)
Comparative genomic hybridization by array (5)
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Plant - High-throughput sequencing (2)
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Animal - Single-cell sequencing (1)
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Genotyping by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

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Shell protein plasticity assists oyster larval shell formation in adverse carbonate chemistry

Shell proteins were extracted from larval Hong Kong oysters (Magallana hongkongensis) after exposure to control (pH 8.1) and adverse carbonate chemistry (pH 7.4).

ORGANISM(S): Crassostrea hongkongensis

2025-12-17 | PXD046805 | Pride