Hong Yu Y - OmicsDI

Show results for

Unknown (2974)
Proteomics (65)
Transcriptomics (19)
Genomics (13)
Metabolomics (13)
Models (2)

Organisms

Homo sapiens (49)
Schizosaccharomyces pombe (23)
Human immunodeficiency virus 1 (23)
Oryza sativa Indica Group (23)
Sinorhizobium meliloti BL225C (23)
Sus scrofa domesticus (23)
Ostreococcus tauri (23)
Saccharomyces cerevisiae (23)
Vitis vinifera (23)
Staphylococcus aureus (23)
Rattus norvegicus (23)
Escherichia coli (23)
Candida albicans (23)
Cyanophora paradoxa (23)
Bursaphelenchus xylophilus (23)
Camelus dromedarius (23)
Entamoeba histolytica (23)
Physcomitrium patens (23)
Methylohalobius crimeensis 10Ki (23)
Mus musculus (12)
Drosophila melanogaster (3)
cellular organisms (2)
Rattus norvegicus (2)
Citrus sinensis (1)
Mycobacterium tuberculosis (1)
Capsella rubella (1)
Microcystis aeruginosa (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Caenorhabditis elegans (1)
Arabidopsis thaliana (1)

Repository

iProX (40)
pride (23)
biostudies-arrayexpress (20)
MetaboLights (13)
EGA (12)
BioModels (2)
jPOST (1)
MassIVE (1)

Tissue

Cell culture (5)
Plant cell (3)
Urine (2)
Blood serum (2)
Whole body (2)
Synapse (1)
Sperm (1)
Spermatozoon (1)
Keratinocyte (1)
Brain (1)
Cell suspension culture (1)
Blood plasma (1)
Stem cell (1)
Leaf (1)
Liver (1)
Blood (1)

Disease

Autistic disorder (1)
IgA glomerulonephritis (1)
Alzheimer's disease (1)
COVID-19 (1)

Technology Type

Mass Spectrometry (23)
Mass spectrometry (13)
Shotgun proteomics (8)
SWATH MS (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Gel-based experiment (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Illumina HiSeq 2000 (2)
Top-down proteomics (2)
Bottom-up proteomics (2)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina HiSeq 4000 (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
6540 Q-TOF LC/MS (Agilent) (2)
LTQ Orbitrap Elite (1)
Q Exactive (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - alternating – hilic (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2025 (14)
2024 (11)
2023 (9)
2014 (6)
2022 (6)
2016 (5)
2020 (5)
2019 (4)
2011 (4)
2021 (4)
2026 (4)
2013 (3)
2018 (2)
2010 (2)
2012 (1)
2015 (1)

UNIPROT ID/AC

P17676 (2)
P15260 (2)
P67775 (2)
P62136 (2)
P08887 (2)
P40189 (2)
P01579 (2)
O14543 (2)
P42224 (2)
P40763 (2)
O60674 (2)
P05231 (2)
P01112 (2)
P04049 (2)
Q02750 (2)
P28482 (2)
Q07889 (2)
Q06124 (2)
P62993 (2)
O15524 (2)
P23458 (2)

CHEBI ID

CHEBI:16196 (6)
CHEBI:15756 (6)
CHEBI:17351 (6)
CHEBI:18089 (6)
CHEBI:28875 (5)
CHEBI:15741 (5)
CHEBI:16704 (5)
CHEBI:28716 (5)
CHEBI:30813 (4)
CHEBI:32365 (4)
CHEBI:48430 (4)
CHEBI:16755 (4)
CHEBI:17126 (4)
CHEBI:16525 (4)
CHEBI:64489 (4)
CHEBI:16750 (4)
CHEBI:16349 (4)
CHEBI:16870 (4)
CHEBI:28044 (4)
CHEBI:16865 (4)
CHEBI:15727 (4)
CHEBI:27823 (4)
CHEBI:16335 (4)
CHEBI:17509 (4)
CHEBI:18347 (4)
CHEBI:17750 (4)
CHEBI:16467 (4)
CHEBI:17203 (4)
CHEBI:16359 (4)
CHEBI:27480 (4)

Metabolite Name

Asparagine (3)
Proline (3)
Isoleucine (3)
Guanosine (3)
Uridine (3)
Creatine (3)
Glycerophosphocholine (3)
Tryptophan (3)
Inosine (3)
Dimethyl sulfone (2)
L-Citrulline (2)
N-Methylnicotinamide (2)
N-Acetyl-D-glucosamine (2)
Norvaline (2)
L-Norleucine (2)
Glycodeoxycholic acid (2)
Gly-Pro (2)
Leucine (2)
Alpha-Linolenic acid (2)
N-Acetylglutamine (2)
3-Hydroxyisovaleric acid (2)
Valine (2)
Betaine (2)
Thymine (2)
Carnosine (2)
Propionic acid (2)
Butyric acid (2)
Acetic acid (2)
5-Hydroxyindoleacetate (2)
L-Proline (2)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Modification

4x(2)H labeled dimethylated L-lysine (2)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (7)
ChIP-chip by tiling array (2)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (500)
2022 (423)
2023 (401)
2024 (394)
2021 (315)
2020 (219)
2018 (122)
2019 (117)
2016 (98)
2017 (91)
2026 (74)
2014 (66)
2015 (65)
2013 (35)
2012 (23)
2011 (14)
2010 (10)
2009 (9)
2008 (5)
2005 (3)
2004 (3)
2002 (2)
2007 (1)
2006 (1)
2003 (1)
2000 (1)
1999 (1)

Lab affiliation

Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (3)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Department of Nephrology, Guangdong Provincial People’s Hospital, Guangdong Academy of Medical Sciences, Guangzhou, China;Guangdong-Hong Kong Joint Laboratory on Immunological and Genetic Kidney Diseases; Guangzhou, China. (1)
Center for Tuberculosis Control of Guangdong Province, Guangzhou, 510630, China (1)
China Pharmaceutical University (1)
Room 6313, Academic building, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon (1)
Nanjing Agricultural University, Binjiang Campus (1)
Proteomics Resource Center, The Rockefeller University, New York, 10065, NY, USA (1)
Asan Medical Center, Clinical Proteomics Core, Republic of Korea (1)
Prometabio Research Institute, prometabio co., ltd. Hanam-si, Gyeonggi-do, Republic of Korea (1)
Department of Biology, Hong Kong Baptist University, Hong Kong (1)
The Hong Kong University of Science and Technology (1)
Division of Life Science, The Hong Kong University of Science and Technology (1)
West No.30 Xiao Hong Shan, Wuhan, Hubei 430071, China Email: hurui@apm.ac.cn (1)
Department of Chemistry, University of California Riverside (1)
HKBU (1)
Department of Microbiology, The University of Hong Kong, Hong Kong, SAR, China (1)
Department of Applied Biology and Chemical Technology,The Hong Kong Polytechnic University (1)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei 430062, China (1)
Zhejiang University (1)