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MetabolomicsMetabolomic Diagnosis in Horse
Not available
ORGANISM(S): Equus caballus 
ST000244 | MetabolomicsWorkbench
TranscriptomicsProfiling of differential allelic expression in horse, donkey, mule, and hinny placental tissues.
In eutherian mammals, dosage compensation of X-linked genes is achieved by X chromosome inactivation. X inactivation is random in embryonic and adult tissues, but imprinted X inactivation (paternal X silencing) has been identified in the extraembryonic membranes of the mouse, rat, and cow. Few othe...
ORGANISM(S): Equus caballus 
2012-05-29 | E-GEOD-36352 | biostudies-arrayexpress
TranscriptomicsWhole transcriptome analyses of six thoroughbred horses before and after exercising using RNA-Seq
We sequenced the whole mRNA of six thoroughbred horse (Equus caballus) blood and muscle tissues before and after exercising, generating a total of 1.3 billion short reads with 90-bp pair-end sequences from 24 samples. Comparing with current genome annotation, we identified 32,361 unigene clusters sp...
ORGANISM(S): Equus caballus 
2013-05-01 | E-GEOD-37870 | biostudies-arrayexpress
TranscriptomicsGenome-wide detection by array CGH of copy number variations among diverse horse breeds
Investigating genome-wide characteristics of CNVs in 6 horses representing 6 distinct breeds by using the aCGH method and performed GO and KEGG analysis for the CNVs genes.This result is an important complement to the mapping of horse whole-genome CNVs and helpful to study plateau horsesM-bM-^@M-^Y ...
ORGANISM(S): Equus caballus 
2014-02-26 | E-GEOD-52504 | biostudies-arrayexpress
TranscriptomicsProfiling of differential allelic expression in horse, donkey, mule and hinny placental tissue
The discovery of genomic imprinting through studies of manipulated mouse embryos indicated that the paternal genome has a major influence on placental development. However, previous research has not demonstrated paternal bias in imprinted genes. We applied RNA sequencing to trophoblast tissue from...
ORGANISM(S): Equus asinus 
2013-05-24 | E-GEOD-30243 | biostudies-arrayexpress
TranscriptomicsGene expression variation in horse placental and fetal tissue, and resting and stimulated horse lymphocytes
This SuperSeries is composed of the following subset Series: GSE35741: Gene expression variation in horse placental and fetal tissue, and resting and stimulated horse lymphocytes [Agilent-018932] GSE35742: Gene expression variation in horse placental tissue, and resting and stimulated horse lymphocy...
ORGANISM(S): Equus caballus 
2012-02-14 | E-GEOD-35743 | biostudies-arrayexpress
TranscriptomicsGene expression variation in horse placental tissue, and resting and stimulated horse lymphocytes [Agilent-021322]
We undertook gene expression microarray experiments to identify genes that are differentially expressed in invasive (Chorionic Girdle) and non-invasive (Chorion) placental tissue, and resting and Pokeweed Mitogen (PWM) stimulated horse lymphocytes. Conceptus tissues were dissected to obtain chorion...
ORGANISM(S): Equus caballus 
2012-02-14 | E-GEOD-35742 | biostudies-arrayexpress
TranscriptomicsAnalysis of Unannotated Equine Transcripts Identified by mRNA Sequencing
Horse-specific genes are not readily identified from available equine EST/cDNA resources due to relatively limited coverage. In addition, equine gene sets predicted in silico by Ensembl and NCBI will not identify horse specific genes since they rely on homology-based projection of gene structure ann...
ORGANISM(S): Equus caballus 
2013-07-30 | E-GEOD-46858 | biostudies-arrayexpress
Genomicshorse metagenome
Microbiome of horse carcass and feces at slaughter
PRJDB12363 | ENA
TranscriptomicsLarge numbers of putative miRNAs originate from DNA transposons and are coincident with a large species radiation in bats.
Vesper bats (family Vespertilionidae) experienced a rapid adaptive radiation beginning around 36 mya that resulted in the second most species rich mammalian family. Coincident with that radiation was an initial burst of DNA transposon activity that has continued into the present. Deep sequencing o...
ORGANISM(S): Equus caballus 
2014-05-19 | E-GEOD-47593 | biostudies-arrayexpress
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