Horst J J - OmicsDI

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Transcriptomics (25)
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Mus musculus (20)
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Rattus norvegicus (1)
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Influenza A virus (A/Panama/2007/1999(H3N2)) (1)
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Thermothelomyces heterothallicus (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (25)
pride (11)
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Tissue

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Disease

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Technology Type

Mass Spectrometry (11)
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Instrument Platform

ScanArray Express HT [PerkinElmer] (1)
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Flow injection analysis MS - (1)

Publication Date

2013 (6)
2012 (5)
2015 (3)
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2006 (2)
2021 (2)
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2009 (1)
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2020 (1)
2018 (1)

CHEBI ID

CHEBI:10545 (1)
CHEBI:10698 (1)
CHEBI:10725 (1)
CHEBI:10727 (1)
CHEBI:10729 (1)
CHEBI:10735 (1)
CHEBI:10986 (1)
CHEBI:11047 (1)
CHEBI:11305 (1)
CHEBI:11805 (1)
CHEBI:11851 (1)
CHEBI:11892 (1)
CHEBI:11951 (1)
CHEBI:12194 (1)
CHEBI:12387 (1)
CHEBI:128769 (1)
CHEBI:13115 (1)
CHEBI:13166 (1)
CHEBI:13170 (1)
CHEBI:132403 (1)
CHEBI:132546 (1)
CHEBI:132918 (1)
CHEBI:133091 (1)
CHEBI:133744 (1)
CHEBI:133803 (1)
CHEBI:136960 (1)
CHEBI:13705 (1)
CHEBI:137386 (1)
CHEBI:137981 (1)
CHEBI:138668 (1)

Metabolite Name

(+)-(1R,2R)-1,2-Diphenylethane-1,2-diol (1)
(+)-Isoxanthochymol (1)
(+)-O-Methylarmepavine (1)
(+)-Setoclavine (1)
(+)-Zeylenol (1)
(+-)-(Z)-2-(5-Tetradecenyl)cyclobutanone (1)
(+-)-3-Hydroxynonanoic acid (1)
(+-)-Anisoxide (1)
(+-)-threo-1-(p-Hydroxyphenyl)propylene glycol 4'-glucoside (1)
(+/-)-3-[(2-methyl-3-furyl)thio]-2-butanone (1)
(-)-Epiafzelechin 3-gallate (1)
(-)-Gossypol (1)
(-)-Nopol (1)
(-)-erythro-Anethole glycol 1-glucoside (1)
(-)-trans-Carveol (1)
(-)-trans-Carveol glucoside (1)
(10S,11S)-Pterosin C (1)
(12S,15S)-15-O-Demethyl-10,29-dideoxy-11,12-dihydro-striatin C (1)
(1R,3R,4R,5S,6S,8x)-1-Acetoxy-8-angeloyloxy-3,4-epoxy-5-hydroxy-7(14),10-bi... (1)
(1R,3S,4S,6R)-6,9-Dihydroxyfenchone 6-O-b-D-glucoside (1)
(1Z,4Z)-1,5-bis(4-hydroxyphenyl)-1,4-pentadiene (1)
(1xi,3xi)-1,2,3,4-Tetrahydro-1-methyl-beta-carboline-3-carboxylic acid (1)
(2-Naphthalenyloxy)acetic acid (1)
(20R)-Ginsenoside Rh2 (1)
(2R,2'S)-Isobuteine (1)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (1)
(2R,3S)-Piscidic acid (1)
(2S,4R,6S)-2-[2-(4-Hydroxy-3-methoxyphenyl)ethyl]tetrahydro-6-(4-hydroxy-3,5-dimethoxyphenyl)-2H-pyran-4-ol (1)
(2S,4S,6S)-2-[2-(4-Hydroxy-3-meyhoxyphenyl)ethyl]tetrahydro-6-(4,5-dihydroxy-3-methoxyphenyl)-2H-pyran-4-ol (1)
(2xi,6xi)-7-Methyl-3-methylene-1,2,6,7-octanetetrol (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

First Public Date

2024 (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (24)
RNA-seq of coding RNA (1)

Release Date

2022 (69)
2020 (64)
2023 (62)
2021 (59)
2025 (56)
2024 (52)
2015 (34)
2019 (34)
2016 (31)
2017 (30)
2014 (24)
2013 (22)
2018 (22)
2012 (18)
2009 (11)
2026 (11)
2011 (10)
2010 (9)
2007 (7)
2008 (6)
2006 (6)
2005 (4)
2002 (1)
1999 (1)

Lab affiliation

Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk (2)
Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands (1)
Charité Univeristätsmedizin Berlin, Department of Surgery, Augustenburger Platz 1, 13353 Berlin (1)
Department of Biomedicine, Aarhus University (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (1)
Diabetes and Circadian Rhythms Department, Nestlé Institute of Health Sciences, CH-1015 Lausanne, Switzerland (1)
Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre Institute of the Royal Netherlands Academy of Arts and Sciences(KNAW) Fungal Molecular Physiology, Utrecht University Utrecht, The Netherlands (1)
Hopp Children`s Cancer Center Heidelberg (KiTZ) National Center for Tumor Diseases (NCT), NCT Heidelberg, a partnership between DKFZ and Heidelberg University Hospital, Germany Division of Translational Pediatric Sarcoma Research, German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK), Heidelberg, Germany (1)
Professor of Microbiology Hospital Clinic Head of the Department of Clinical Microbiology School of Medicine, University of Barcelona Barcelona, Spain (1)
Proteome Dynamics, Max Delbruck Center for Molecular Medicine, Germany (1)

Tags

xref:PubMed:38422122 (1)

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Differential roles for cryptochromes in the mammalian retinal clock.

Not available

S-EPMC6071063 | biostudies-literature

Enhancing Use of Medications for Opioid Use Disorder Through External Coaching.

Not available

S-EPMC10836327 | biostudies-literature

Axonal and periaxonal swelling precede peripheral neurodegeneration in KCC3 knockout mice.

Not available

S-EPMC2242858 | biostudies-literature

Prior Exposure and Toddlers' Sleep-Related Memory for Novel Words.

Not available

S-EPMC8534215 | biostudies-literature

Role of GSH and Iron-Sulfur Glutaredoxins in Iron Metabolism-Review.

Not available

S-EPMC7503856 | biostudies-literature

Aging Experiment

Lifelong murine gene expression profiles in relation to chronological and biological aging in multiple organs Five tissues: Kidney, Liver, Lung, Spleen, Brain. Six timepoints: 13wks, 26 wks, 52wks, 78wks, 104wks, 130wks. One Genotype: C57Bl/6, 3 replicates

ORGANISM(S): Mus musculus

2013-07-10 | E-GEOD-34378 | biostudies-arrayexpress

Expression data from TOP-GFP sorted colon cancer cells

Colon cancers typically contain tumor cell populations with differential WNT signaling activity. Colon cancer cells with high WNT-activity have been attributed increase tumorigenic potential and stem cell characteristics. We extracted tumor cells with differential WNT activity using fluorescent repo...

ORGANISM(S): Homo sapiens

2012-02-16 | E-GEOD-32408 | biostudies-arrayexpress

A CD8+ T cell immune evasion protein specific to Epstein-Barr virus and its close relatives in Old World primates.

Not available

S-EPMC2118677 | biostudies-literature

Deciphering the neural signature of human cardiovascular regulation.

Not available

S-EPMC7386911 | biostudies-literature

Expression of Nectin-4 in Variant Histologies of Bladder Cancer and Its Prognostic Value-Need for Biomarker Testing in High-Risk Patients?

Not available

S-EPMC9497069 | biostudies-literature