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TranscriptomicsEffect of TET1 and TET3 overexpression on the transcriptome of HEK293 cells
We compared TET1 and TET3 overexpressing cells to uninduced cells with endogenous levels of the respective transcript to determine global gene expression changes. TET1 overexpression, TET3 overexpression
ORGANISM(S): Homo sapiens 
2015-07-16 | E-GEOD-39186 | biostudies-arrayexpress
Genomicsena-DATASET-DEEP-08-06-2015-12:48:05:403-429 - samples
Human monocytes from a healthy male blood donor were obtained after written informed consent and anonymised. Library preparation was performed essentially as described in the “Whole‐genome Bisulfite Sequencing for Methylation Analysis (WGBS)” protocol as released by Illumina. The library was sequenc...
EGAD00001001390 | EGA
GenomicsEvolutionary origin and methylation status of human intronic CpG islands that are not present in mouse
Imprinting of the human RB1 gene is due to the presence of a differentially methylated CpG island (CGI) in intron 2, which is part of a retrogene derived from the PPP1R26 gene on chromosome 9. The murine Rb1 gene does not have this retrogene and is not imprinted. We have investigated whether the RB1...
EGAS00001000719 | EGA
GenomicsDEEP (Deutsches Epigenom Programm) DAC
Data Access Committee EGAC00001000179
EGAC00001000179 | EGA
TranscriptomicsPRRX1 transcription factor association to type 2 diabetes
Primary human adipose stromal cells (hASCs) from rs4684847 CC risk allele carriers were cultured and induced to differentiate into adipocytes, and simultaneously transfected for 72h with non-targeting siRNA or siRNA targeting PRRX1 (n=10) or both PRRX1 and PPARG (subset of the subjects, n=4).
ORGANISM(S): Homo sapiens 
2013-12-01 | E-MTAB-1906 | biostudies-arrayexpress
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