Hu F F - OmicsDI

Show results for

Unknown (17577)
Transcriptomics (472)
Proteomics (396)
Genomics (113)
Metabolomics (81)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (427)
Mus musculus (191)
Rattus norvegicus (54)
Saccharomyces cerevisiae (33)
Arabidopsis thaliana (32)
Streptomyces coelicolor (18)
Drosophila melanogaster (11)
Gallus gallus (10)
Schizosaccharomyces pombe (7)
Danio rerio (7)
Macaca mulatta (6)
Ovis aries (5)
Triticum aestivum (5)
Solenopsis invicta (4)
Streptococcus pneumoniae (3)
Rattus rattus (3)
Shewanella piezotolerans WP3 (2)
Fusarium fujikuroi (2)
Camponotus floridanus (2)
Papio hamadryas (2)
Brassica napus (2)
Oryza sativa Indica Group (2)
Oryza sativa Japonica Group (2)
Caenorhabditis elegans (2)
Saccharomyces cerevisiae W303 (1)
Nannochloropsis oceanica (1)
Cynoglossus semilaevis (1)
Brassica oleracea (1)
Agrobacterium sp. 31749 (1)
Musa acuminata (1)

Organisms

Camellia chekiangoleosa (3)
Homo sapiens (3)
Mus musculus (3)
Ziziphus jujuba (2)
Ovis aries (2)
Morus alba (2)
Francisella tularensis subsp. holarctica FSC200 (1)
Ziziphus jujuba var. spinosa (1)
sheep gut metagenome (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (514)
pride (253)
iProX (91)
MetaboLights (80)
EGA (41)
MassIVE (33)
ENA (28)
jPOST (10)
geo (6)
PeptideAtlas (4)
PAXDB (3)
dbGaP (1)
EVA (1)
GNPS (1)
PanoramaPublic (1)

Tissue

Cell culture (45)
Liver (17)
Epithelial cell (15)
Brain (14)
Blood serum (13)
Leaf (12)
Lung (11)
Permanent cell line cell (10)
Blood plasma (8)
Heart (8)
Plant cell (7)
Whole body (6)
Hepatocyte (4)
Root (4)
Skin (4)
T cell (4)
Liver (3)
Cell suspension culture (3)
Embryo (3)
Kidney (3)
Stomach (3)
Testis (3)
Bark (2)
Blood (2)
Blood platelet (2)
Bone marrow (2)
Byssus (2)
Colon (2)
Cumulus cell (2)
Brain (1)

Disease

Disease free (6)
Breast cancer (4)
Colon cancer (4)
Pancreatic cancer (4)
Normal (3)
Hepatocellular carcinoma (3)
Non-small cell lung carcinoma (3)
Ovarian tumor (2)
Acute leukemia (2)
Acute erythroid leukemia (1)
Schizophrenia (1)
Alveolar rhabdomyosarcoma (1)
Infected (1)
Dukes D primary colon cancer (1)
Mock infected (1)
Porphyria NOS (1)
Colon cancer metastasis (1)
Infected (1)
Rheumatoid arthritis (1)
Acute lymphoblastic leukemia (1)
None- acute control (1)
Invasive lobular carcinoma (1)
IBDV infected (1)
Locally advanced rectal cancer (1)
Neurological disease (1)
Benign adenoma (1)
Chronic lymphocytic leukemia (1)
None- Acute Control (1)
Lymphoma (1)
Neurofibromatosis type 1 (1)

Technology Type

Mass Spectrometry (253)
Shotgun proteomics (128)
Mass spectrometry (63)
Bottom-up proteomics (34)
Affinity purification coupled with mass spectrometry proteomics (33)
Data-dependent acquisition (27)
Gel-based experiment (25)
Data-independent acquisition (14)
Mass spectrometry assay (13)
Top-down proteomics (10)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
NMR spectroscopy (6)
All-ion fragmentation (6)
SWATH MS (6)
Proteogenomics (5)
Illumina HiSeq 2000 (4)
HDMSE (3)
MSE (2)
Mass spectrometry imaging (2)
SRM/MRM (2)
Affymetrix 6.0 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy assay (1)
DiaPASEF (1)
Glycoproteomics (1)
Metaproteomics (1)
PAcIFIC (1)

Instrument Platform

NextSeq 500 (16)
Illumina NovaSeq 6000 (10)
Q Exactive (7)
Illumina HiSeq 2000 (6)
LTQ Orbitrap Velos (5)
GenePix Professional 4200A [Axon Instruments] (3)
NA (3)
Illumina MiSeq (3)
Bioanalyzer 2200 (2)
Chromium Controller (2)
ScanArray 5000 [PerkinElmer] (2)
Generation III Scanner (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
MaXis (2)
MA900, Sony (1)
10x Chromium Controller (1)
Microarray scanner system (1)
10X Genomics Chromium (1)
Axon Instruments GenePix 4000B scanner (1)
Covaris E220evolution (1)
GeneChip Scanner 3000 [Affymetrix] (1)
Axon- GenePix4000B (1)
ScanArray Express HT [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina NovaSeq X (1)
Ion Torrent PGM (1)
NextSeq 550 (1)
- (1)
LTQ FT (1)

Publication Date

2022 (77)
2010 (72)
2023 (70)
2025 (62)
2024 (62)
2012 (62)
2013 (59)
2026 (56)
2021 (55)
2005 (51)
2014 (44)
2015 (42)
2011 (41)
2019 (40)
2016 (38)
2020 (32)
2018 (25)
2007 (25)
2009 (22)
2008 (22)
2017 (18)
2006 (10)
2004 (4)
2003 (3)

UNIPROT ID/AC

A0A0J7JTK4_LASNI (3)
A0A0J7JUA0_LASNI (3)
A0A0J7JUB2_LASNI (3)
A0A0J7JUM2_LASNI (3)
A0A0J7JV67_LASNI (3)
A0A0J7JVD4_LASNI (3)
A0A0J7JXY1_LASNI (3)
A0A0J7JXY9_LASNI (3)
A0A0J7JY69_LASNI (3)
A0A0J7JYI5_LASNI (3)
A0A0J7JYK1_LASNI (3)
A0A0J7JYR0_LASNI (3)
A0A0J7JYY5_LASNI (3)
A0A0J7JZM0_LASNI (3)
A0A0J7JZN3_LASNI (3)
A0A0J7JZY4_LASNI (3)
A0A0J7K0B0_LASNI (3)
A0A0J7K0U7_LASNI (3)
A0A0J7K146_LASNI (3)
A0A0J7K164_LASNI (3)
A0A0J7K177_LASNI (3)
A0A0J7K1D7_LASNI (3)
A0A0J7K1E1_LASNI (3)
A0A0J7K1I3_LASNI (3)
A0A0J7K1P4_LASNI (3)
A0A0J7K1Q8_LASNI (3)
A0A0J7K1Y2_LASNI (3)
A0A0J7K1Y9_LASNI (3)
A0A0J7K201_LASNI (3)
A0A0J7K208_LASNI (3)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:15741 (28)
CHEBI:30769 (27)
CHEBI:17750 (23)
CHEBI:30915 (23)
CHEBI:15428 (22)
CHEBI:6650 (22)
CHEBI:15354 (21)
CHEBI:16704 (21)
CHEBI:17596 (21)
CHEBI:15891 (20)
CHEBI:17568 (20)
CHEBI:16708 (19)
CHEBI:16919 (19)
CHEBI:16750 (18)
CHEBI:17154 (18)
CHEBI:18012 (18)
CHEBI:28300 (18)
CHEBI:15676 (17)
CHEBI:16335 (17)
CHEBI:16737 (17)
CHEBI:16811 (17)
CHEBI:17191 (17)
CHEBI:17368 (17)
CHEBI:25094 (17)
CHEBI:28044 (17)
CHEBI:16027 (16)
CHEBI:16235 (16)
CHEBI:16414 (16)
CHEBI:16467 (16)
CHEBI:17015 (16)

Metabolite Name

Uridine (15)
Adenine (14)
Taurine (14)
Choline (13)
Creatine (13)
Hypoxanthine (13)
Xanthine (13)
Citric acid (12)
Guanine (12)
Inosine (12)
L-Tyrosine (12)
Methionine (12)
Uracil (12)
Adenosine (11)
Guanosine (11)
Serine (11)
Creatinine (10)
Cytidine (10)
L-Arginine (10)
L-Isoleucine (10)
L-Phenylalanine (10)
L-Valine (10)
Thymidine (10)
Alanine (9)
Betaine (9)
Cholic acid (9)
Cytosine (9)
Glycine (9)
L-Glutamine (9)
L-Histidine (9)

First Public Date

2026 (5)
2024 (5)
2020 (5)
2017 (3)
2023 (2)
2022 (2)
2014 (2)
2025 (1)
2021 (1)
2019 (1)
2015 (1)

Classification

bacteria (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)
57.021464 (1)
6-dioxaoctanediamine derivatized cysteine (1)
6x(2)H labeled dimethylated L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (323)
RNA-seq of coding RNA (48)
ChIP-seq (33)
Other (14)
Unknown experiment type (13)
ChIP-chip by tiling array (13)
RNA-seq of non coding RNA (12)
Comparative genomic hybridization by array (8)
Methylation profiling by high throughput sequencing (8)
RNA-seq of coding RNA from single cells (6)
Cell line - High-throughput sequencing (4)
Genotyping by array (4)
Methylation profiling by array (4)
ATAC-seq (3)
CUT&RUN (3)
Transcription profiling by SAGE (2)
Single nucleus RNA sequencing (2)
Cell line - One-color microarray (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Hi-C (1)
MicroRNA profiling by array (1)
DNA-seq (1)

Release Date

2025 (2587)
2022 (2396)
2024 (2139)
2023 (2122)
2021 (1771)
2020 (1335)
2019 (994)
2018 (842)
2017 (727)
2016 (628)
2015 (530)
2014 (407)
2026 (333)
2013 (320)
2012 (273)
2011 (185)
2010 (170)
2009 (93)
2008 (77)
2005 (59)
2007 (47)
2006 (29)
2004 (14)
2003 (6)
2001 (3)
1998 (2)
1999 (1)
1997 (1)

Lab affiliation

Guangzhou Medical University (4)
Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (4)
BGI Research (3)
Central South University (3)
University at buffalo, SUNY (3)
Yazhouwan National Laboratory, Sanya 572024, China (3)
Abbvie Bioresearch Center (2)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany; Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, UK. (2)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (2)
Department of Clinical Laboratory, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China. The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (2)
Dr. Jörn Dengjel Prof. for Biochemistry and Cell Biology Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 E joern.dengjel@unifr.ch F +41 26 300 9741 (2)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (2)
Eppley Institute for Research in Cancer University of Nebraska Medical Center Omaha, NE 68198, USA (2)
Hu Nan (2)
Institute for Systems Biology, Seattle, WA, USA (2)
Institute of Biochemistry, University of Kiel (2)
Moffitt Cancer Center Tampa, FL, USA (2)
Nanjing Medical University (2)
SIMM (2)
School of Pharmacy, University of Wisconsin-Madison (UW-Madison) (2)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (2)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei,China (2)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, Jiangsu,China. (2)
Systems Biology Ireland, University College Dublin (2)
UT Southwestern Medical Center (2)
University of Minnesota at Twin Cities (2)
Wenzhou Medical University (2)
Zhejiang Provincial Key Laboratory of Medical Genetics, Key Laboratory of Laboratory Medicine, Ministry of Education, China, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1.Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. 2.Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. (1)

Previous page
1 / 1865
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1865
Next page

Sort by:

Relevance

Page size

Effect of Ipomoeassin F on the Proteome Profile in Triple-Negative Breast Cancer Cells

Ipomoeassin F (Ipom-F) is a natural compound that exhibits a potent cytotoxic effect on triple-negative breast cancer (TNBC) cells. The mechanism underlying this selective potency remains unclear. To elucidate this mechanism, we analyzed the proteome profiles of the TNBC MDA-MB-231 cells after expos...

ORGANISM(S): Homo sapiens (Human)

2025-09-15 | PXD060444 | Pride

Huamn colon cancer cell line SW480 proteome changes following Lappaol F treatment

Lappaol F, a natural lignin isolated from the seeds of Arctium lappa L., was previously shown to have an inhibitory effect on tumour cells and might be a promising drug candidate for cancer chemotherapy. In the present study, human colon cancer cell line SW480 was treated with Lappaol F, and quantit...

ORGANISM(S): Homo sapiens (Human)

2022-10-13 | PXD017872 | Pride

Lappaol f huamn colon cancer cell line sw480 differentially expressed proteins

Expression data from Shp2f/f and SCSKO mice testis

The ability of male reproduction is seriously dependent on Sertoli cells. However, the mechanisms governing the functional integrity of Sertoli cells remained largely unexplored. Tyrosine phosphatase protein Shp2 is expressed in germ, Leydig and Sertoli cells of mice testes. But the physiological ro...

ORGANISM(S): Mus musculus

2015-05-14 | E-GEOD-68829 | biostudies-arrayexpress

Arabidopsis F-box proteins D5BF1 and D5BF2 negatively regulate Agrobacterium-mediated transformation and tumorigenesis.

Not available

S-EPMC11393451 | biostudies-literature

Contributions of F-specific subunits to the F plasmid-encoded type IV secretion system and F pilus.

Not available

S-EPMC9359479 | biostudies-literature

The F-like protein Ac23 enhances the infectivity of the budded virus of gp64-null Autographa californica multinucleocapsid nucleopolyhedrovirus pseudotyped with baculovirus envelope fusion protein F.

Not available

S-EPMC2546973 | biostudies-literature

Structural bases for F plasmid conjugation and F pilus biogenesis in Escherichia coli.