Hu Wei W - OmicsDI

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Unknown (1930)
Proteomics (101)
Transcriptomics (99)
Genomics (20)
Metabolomics (12)

Organisms

Homo sapiens (95)
Mus musculus (28)
Streptomyces coelicolor (17)
Rattus norvegicus (5)
Arabidopsis thaliana (4)
Severe acute respiratory syndrome coronavirus 2 (4)
Triticum aestivum (3)
Saccharomyces cerevisiae (3)
Tetrahymena thermophila (2)
Oryza sativa (2)
Oryza sativa Japonica Group (2)
Bupleurum scorzonerifolium (1)
Capsella grandiflora (1)
Nannochloropsis oceanica (1)
Agrobacterium sp. 31749 (1)
Rhodopseudomonas palustris (1)
Urocitellus parryii (1)
Macaca mulatta (1)
Brassica napus (1)
Oryza sativa Indica Group (1)
Listeria monocytogenes (1)
Populus tremula x Populus alba (1)
Sus scrofa (1)
Ailuropoda melanoleuca (1)
Bombyx mori (1)
Escherichia coli (1)
Manihot esculenta (1)
Papilio xuthus (1)
Rattus rattus (1)
Schistosoma mansoni (1)

Repository

biostudies-arrayexpress (105)
iProX (59)
pride (36)
EGA (14)
MetaboLights (11)
MassIVE (3)
PeptideAtlas (3)
GNPS (1)

Tissue

Cell culture (9)
Epithelial cell (7)
Liver (3)
Blood (2)
Plant cell (2)
Blood plasma (1)
Early embryonic cell (1)
Embryo (1)
Flower (1)
Flower bud (1)
Heart (1)
Kidney (1)
Leaf (1)
Leukocyte (1)
Liver (1)
Macrophage (1)
Midgut (1)
Ovary cell line (1)
Pancreas (1)
Pericyte cell (1)
Permanent cell line cell (1)
Plant (1)
Seedling (1)
Spinal cord (1)
T cell (1)
T-cell acute lymphoblastic leukemia cell (1)
Testis (1)
Whole body (1)

Disease

Disease free (3)
Acute leukemia (1)
Brain cancer (1)
Brain ischemia (1)
Cervix carcinoma (1)
Lung carcinoma (1)
Malignant neoplasm of ovary (1)
Renal cell carcinoma (1)

Technology Type

Mass Spectrometry (36)
Shotgun proteomics (15)
Mass spectrometry (8)
Bottom-up proteomics (7)
Data-dependent acquisition (5)
Gel-based experiment (5)
Data-independent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (6)
Unknown (3)
NextSeq 500 (2)
LTQ Orbitrap Velos (2)
MA900, Sony (1)
10x Chromium Controller (1)
Covaris E220evolution (1)
Illumina NovaSeq 6000 (1)
LTQ FT (1)
MaXis (1)
LTQ Orbitrap Elite (1)
Q Exactive (1)
Liquid Chromatography MS - (1)
Bruker (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2024 (28)
2010 (22)
2012 (20)
2014 (18)
2025 (15)
2026 (14)
2013 (13)
2022 (13)
2023 (12)
2011 (12)
2020 (10)
2021 (9)
2015 (8)
2019 (6)
2018 (4)
2009 (3)
2008 (3)
2017 (3)
2016 (2)

UNIPROT ID/AC

A6NNZ2 (3)
B3KML9 (3)
B4E3A4 (3)
C9JZR2 (3)
E9PRE2 (3)
I3L4N8 (3)
O15173 (3)
O60716 (3)
P02730 (3)
P02792 (3)
P04350 (3)
P05023 (3)
P05783 (3)
P05787 (3)
P06576 (3)
P07099 (3)
P07437 (3)
P25705 (3)
P31327 (3)
P35579 (3)
P35580 (3)
P35580-4 (3)
P50454 (3)
P51571 (3)
P60709 (3)
P62805 (3)
P63261 (3)
P68371 (3)
Q00266 (3)
Q01082 (3)

CHEBI ID

CHEBI:30763 (5)
CHEBI:28834 (5)
CHEBI:16958 (5)
CHEBI:16015 (5)
CHEBI:18012 (5)
CHEBI:16414 (5)
CHEBI:17295 (5)
CHEBI:30769 (5)
CHEBI:15584 (4)
CHEBI:16755 (4)
CHEBI:30746 (4)
CHEBI:17859 (4)
CHEBI:18211 (4)
CHEBI:16359 (4)
CHEBI:16704 (4)
CHEBI:16857 (4)
CHEBI:30887 (4)
CHEBI:6650 (4)
CHEBI:15971 (4)
CHEBI:16865 (4)
CHEBI:15843 (4)
CHEBI:17568 (4)
CHEBI:15741 (4)
CHEBI:17203 (4)
CHEBI:16977 (4)
CHEBI:15428 (4)
CHEBI:17053 (4)
CHEBI:17895 (4)
CHEBI:28865 (4)
CHEBI:169546 (3)

Metabolite Name

Cholic acid (6)
Citric acid (6)
Uridine (6)
Deoxycholic acid (5)
Stearic acid (5)
Arachidonic acid (5)
Chenodeoxycholic acid (4)
Benzoic acid (4)
Taurine (4)
Pentadecanoic acid (4)
Isocitric acid (4)
Glyceric acid (4)
Glutaric acid (4)
Xanthine (4)
Pelargonic acid (3)
3-Methyl-2-oxovaleric acid (3)
2-Hydroxy-3-methylbutyric acid (3)
Methylsuccinic acid (3)
L-Alanine (3)
Glycolic acid (3)
Uracil (3)
Genistein (3)
2-Hydroxybutyric acid (3)
Nicotinic acid (3)
Maleic acid (3)
Erythrono-1,4-lactone (3)
Taurocholic acid (3)
Tauroursodeoxycholic acid (3)
Catechin (3)
Citraconic acid (3)

Study type

Transcription profiling by array (74)
RNA-seq of coding RNA (14)
RNA-seq of non coding RNA (6)
ChIP-seq (5)
Genotyping by array (2)
MNase-seq (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (329)
2024 (265)
2023 (254)
2022 (246)
2021 (183)
2020 (156)
2019 (106)
2017 (81)
2018 (80)
2016 (59)
2015 (52)
2026 (49)
2014 (46)
2012 (35)
2013 (29)
2010 (26)
2011 (21)
2009 (7)
2008 (6)
2007 (1)
2005 (1)
2004 (1)
2003 (1)
2001 (1)

Lab affiliation

BGI Research (3)
Tianjin Medical University General Hospital (3)
Huazhong University of Science and Technology Union Shenzhen Hospital (2)
1) Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany 2) School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom (1)
Cedars-Sinai Medical Center (1)
Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College (1)
College of Biomedical Engineering & Instrument Science, Zhejiang University (1)
College of Biomedical Engineering & Instrument Science,Zhejiang University (1)
Department of Biophysics and Structural Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & School of Basic Medicine, Peking Union Medical College (1)
Department of Biotherapy, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, and West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu 610041, P.R. China (1)
Department of Chemical Engineering and Materials Science, University of Minnesota (1)
Department of Chemistry, The University of Hong Kong (1)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (1)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, No. 1 Beigou Xiangshan, Beijing, 100193, China (1)
Institute of Biochemistry, College of Life Sciences Zhejiang Sci-Tech University (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)
Key Laboratory of Environmental Medicine Engineering, Ministry of Education, School of Public Health, Southeast University, Nanjing, China. (1)
Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences; Guangzhou, 510530, China. (1)
Nanjing Medical University (1)
National Chromatography Research and Analysis Center,Department of Biology,Dalian Institute of Chemical Physics (1)
School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom Ruhr University Bochum Department of plant Biochemistry 44801 Bochum Germany (1)
School of Pharmaceutical Sciences, Guangzhou University of Chinese Medicine (1)
School of pharmaceutical science,Sun Yat-Sen University (1)
Shenzhen Key Laboratory of Gene Regulation and Systems Biology, Department of Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518005, China (1)
Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518005, China (1)
State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, the First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, China (1)
State Key Laboratory of Developmental Biology of Freshwater Fish, College of Life Science, Hunan Normal University, Changsha, 410081, P. R. China. (1)
Systems Biology of Signal Transduction, German Cancer Research Center Heidelberg, Germany (1)
University of Virginia (1)
Volker Boehm Gehring Lab, Institute for Genetics, University of Cologne, 50674 Cologne, Germany (1)

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Global Mapping of Histone H3 K4 and K27 Trimethylation: Lineage Fate Determination of Differentiating CD4+ T Cells

Multipotential naïve CD4+ T cells differentiate into distinct lineages including Th1, Th2, Th17, and inducible T regulatory (iTreg) cells. The remarkable diversity of CD4+ T cells begs the question whether the observed changes reflect terminal differentiation with heritable epigenetic modifications ...

ORGANISM(S): Mus musculus

2009-01-21 | E-GEOD-14254 | biostudies-arrayexpress

Expression changes in Tetrahymena thermophila TRX1 and EZL2 gene knockouts and after hydroxyurea (HU) treatment

12 genome-wide microarrays to investigate the Tetrahymena thermophila gene expression changes in TRX1 and EZL2 gene knockout and hydroxyurea (HU) treatment conditions. For the TRR1 knockout (KO) condition, wild type (WT427) cells and TRX1 KO cells were cultured using 1XSPP, 30 degrees, 100 rpm shaki...

ORGANISM(S): Tetrahymena thermophila

2013-09-04 | E-GEOD-44990 | biostudies-arrayexpress

A Systems Pharmacology Approach for Identifying the Multiple Mechanisms of Action of the Wei Pi Xiao Decoction for the Treatment of Gastric Precancerous Lesions.

Not available

S-EPMC6378068 | biostudies-literature

Identification and characterization of extrachromosomal circular DNA in Wei and Large White pigs by high-throughput sequencing.

Not available

S-EPMC9935582 | biostudies-literature

Mechanistic evaluation of Jiu Wei Qing Zhi Gao in non-alcoholic fatty liver disease: insights from network Pharmacology and experimental validation.

Not available

S-EPMC11992867 | biostudies-literature

S. coelicolor Wild Type R5- Medium Time-course Study

Many biological processes are intrinsically dynamic, incurring profound changes at both molecular and physiological levels. Systems analyses of such processes incorporating large-scale transcriptome or proteome profiling can be quite revealing. Although consistency between mRNA and proteins is often...

ORGANISM(S): Streptomyces coelicolor

2010-06-11 | E-GEOD-7172 | biostudies-arrayexpress

Expression data of Arabidopsis thaliana (Ler accession) phytochrome phyABCDE quintuple mutant and phyABDE quadruple mutant in response to red light, and their comparison to WT expression data

Phytochromes are red/far-red light photoreceptors. We sought to test at the transcriptomic level if Arabidopsis mutants lacking all phytochromes (from phyA to phyE), or just retaining trace levels of phyC, had transcriptional response to red light exposure. phyABCDE and phyABDE mutants were grown fo...

ORGANISM(S): Arabidopsis thaliana

2012-03-31 | E-GEOD-31587 | biostudies-arrayexpress

S. coelicolor Wild Type Time-course Study in R5- medium (Culture#1)

Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this stud...

ORGANISM(S): Streptomyces coelicolor

2010-06-10 | E-GEOD-8084 | biostudies-arrayexpress

S. coelicolor Wild Type Time-course Study in R5- medium (Culture#2)

ORGANISM(S): Streptomyces coelicolor

2010-06-11 | E-GEOD-8086 | biostudies-arrayexpress

S. coelicolor M145 Time-course Study in R5- medium (Culture# 3)

ORGANISM(S): Streptomyces coelicolor

2010-06-11 | E-GEOD-8107 | biostudies-arrayexpress