Huang Jin J - OmicsDI

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Unknown (3287)
Proteomics (61)
Genomics (26)
Metabolomics (15)
Transcriptomics (11)

Organisms

Homo sapiens (52)
Schizophyllum commune H4-8 (17)
Mycobacterium tuberculosis SP7 (17)
Oryza sativa Japonica Group (17)
Crotalus durissus terrificus (17)
Eriocheir sinensis (17)
Candidatus Endoriftia persephonae (17)
Mycobacterium tuberculosis SP10 (17)
Mycobacterium tuberculosis SP13 (17)
Cotesia typhae (17)
Mycobacterium tuberculosis SP22 (17)
Cepaea nemoralis (17)
Enterobacter ludwigii (17)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (17)
Olea europaea (17)
Chlamydomonas reinhardtii (17)
Lama (17)
Mus musculus (12)
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Tardigrada (2)
Drosophila melanogaster (2)
Brassica oleracea (1)
Bombyx mori (1)
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Caenorhabditis elegans (1)
Elaphe taeniura (1)
Pyricularia oryzae P131 (1)
Penicillium digitatum (1)
Morchella sextelata (1)
Oryctolagus cuniculus (1)

Repository

iProX (41)
biostudies-arrayexpress (19)
EGA (18)
pride (17)
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MassIVE (2)
PeptideAtlas (1)

Tissue

Cell culture (7)
Epithelial cell (3)
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Lung neuroendocrine cell (1)
Gastric epithelium (1)
Urinary bladder cancer cell (1)
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Macrophage (1)

Disease

Severe acute respiratory syndrome (2)
Gastroesophageal adenocarcinoma (1)
Small cell carcinoma (1)
Osteoarthritis (1)
Prostate adenocarcinoma (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Lung cancer (1)

Technology Type

Mass Spectrometry (17)
Mass spectrometry (11)
Shotgun proteomics (7)
Bottom-up proteomics (5)
Data-dependent acquisition (4)
Mass spectrometry assay (3)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Immunopeptidomics (1)
Top-down proteomics (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap Elite (1)
Orbitrap Eclipse (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Bruker (1)
Xevo G2 QTOF (Waters) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
LTQ (1)

Publication Date

2024 (16)
2021 (15)
2025 (11)
2026 (10)
2022 (8)
2019 (5)
2020 (4)
2015 (3)
2014 (3)
2012 (3)
2011 (3)
2010 (3)
2023 (3)
2018 (2)
2016 (1)
2013 (1)
2008 (1)
2005 (1)
2017 (1)

CHEBI ID

CHEBI:16027 (6)
CHEBI:30805 (5)
CHEBI:16704 (5)
CHEBI:17568 (5)
CHEBI:15318 (5)
CHEBI:17368 (5)
CHEBI:15354 (5)
CHEBI:16919 (5)
CHEBI:15891 (5)
CHEBI:7916 (5)
CHEBI:17596 (5)
CHEBI:16335 (5)
CHEBI:28689 (4)
CHEBI:27226 (4)
CHEBI:28661 (4)
CHEBI:15929 (4)
CHEBI:16283 (4)
CHEBI:16450 (4)
CHEBI:17189 (4)
CHEBI:17509 (4)
CHEBI:16750 (4)
CHEBI:16927 (4)
CHEBI:17748 (4)
CHEBI:33569 (4)
CHEBI:16610 (4)
CHEBI:28842 (4)
CHEBI:16040 (4)
CHEBI:16857 (4)
CHEBI:16643 (4)
CHEBI:15971 (4)

Metabolite Name

Spermidine (5)
Guanine (5)
Xanthurenic acid (4)
Taurine (4)
Uracil (4)
Thymine (4)
Indole (4)
AMP (4)
Uric acid (4)
Cytosine (4)
L-Valine (4)
1-Pyrroline-4-hydroxy-2-carboxylate (3)
Deoxyuridine (3)
N6-Acetyl-L-lysine (3)
Methyl jasmonate (3)
Valine (3)
Dehydrocholic acid (3)
Gentamicin C1a (3)
Coumestrol (3)
Aspartame (3)
Erucic acid (3)
Ornithine (3)
Kynurenic acid (3)
Aminoadipic acid (3)
Lumichrome (3)
Ergothioneine (3)
Argininosuccinic acid (3)
Pyroglutamic acid (3)
L-Leucine (3)
Glycine (3)

Study type

Transcription profiling by array (8)
ChIP-seq (6)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (553)
2022 (445)
2023 (394)
2024 (384)
2021 (379)
2020 (253)
2019 (186)
2018 (131)
2017 (123)
2016 (105)
2015 (105)
2026 (60)
2014 (58)
2013 (34)
2012 (22)
2011 (22)
2010 (19)
2009 (9)
2008 (7)
2005 (4)
2007 (4)
2004 (3)
2003 (2)
2000 (2)
2001 (1)
1998 (1)

Lab affiliation

Mayo Clinic, Department of Oncology (2)
Hubei Normal University (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Washington University, St. Louis (1)
Zhejiang Provincial People’s Hospital (1)
Department of Pathology and Duke Cancer Institute, Duke University School of Medicine, Durham, NC 27710, USA (1)
Daping Hospital of AMU (1)
Novartis Institute of Biomedical Research (1)
Central South University (1)
shandong normal university (1)
Agios Pharmaceuticals 88 Sidney Street Cambridge MA 02139 USA (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
Sun Yat-sen University (1)
Dept. Chemical Proteomics, Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences (1)
Zhejiang Provincial Key Laboratory of Medical Genetics, Key Laboratory of Laboratory Medicine, Ministry of Education, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University, Wenzhou, Zhejiang, 325035, China. 2 Department of Urology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang, 325035, China. (1)
Zhejiang University (1)

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The IDI1/SREBP2 axis drives intrahepatic cholestasis and is a treatment target of San-Huang-Cai-Zhu formula identified by sequencing and experiments.

Not available

S-EPMC9944032 | biostudies-literature

Complete Genome Sequence of Bacillus subtilis J-5, a Potential Biocontrol Agent.

Not available

S-EPMC5465608 | biostudies-literature

Detection of superficial esophageal squamous cell neoplasia by chromoendoscopy-guided confocal laser endomicroscopy.

Not available

S-EPMC4462739 | biostudies-literature

The Anti-Inflammatory Effects of a Yin Zhi Huang Soup in an Experimental Autoimmune Prostatitis Rat Model.

Not available

S-EPMC5752995 | biostudies-literature

Mtb_clinical_JCVI

This data set contains 6 MudPit data sets of two different strains of M. tuberculosis, A12998 (daughter strain, drug-resistant) and A7494 (parent strain, drug-sensitive). This data was published via upload to Peptidome as Study PSE133 by Moo-Jin Suh, Rembert Pieper, and Shih-Ting Huang from the J. C...

ORGANISM(S): Mycobacterium Tuberculosis

PAe001949 | PeptideAtlas

A Preliminary Inquiry Into the Potential Mechanism of Huang-Lian-Jie-Du Decoction in Treating Rheumatoid Arthritis via Network Pharmacology and Molecular Docking.

Not available

S-EPMC8807552 | biostudies-literature

Suppressing inflammatory signals and apoptosis-linked sphingolipid metabolism underlies therapeutic potential of Qing-Jin-Hua-Tan decoction against chronic obstructive pulmonary disease.

Not available

S-EPMC10839876 | biostudies-literature

Network pharmacology, molecular docking, and experimental verification reveal the mechanism of San-Huang decoction in treating acute kidney injury.

Not available

S-EPMC9939458 | biostudies-literature

Exploration of the Interrelationship within Biomass Pyrolysis Liquid Composition Based on Multivariate Analysis.