Huang Y-J YJ - OmicsDI

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Unknown (438)
Genomics (48)
Proteomics (11)
Transcriptomics (9)
Metabolomics (3)

Organisms

Homo sapiens (62)
Mus musculus (2)
Drosophila simulans (1)
Saccharomyces cerevisiae (1)
Arabidopsis thaliana (1)
Rhodopseudomonas palustris (1)

Repository

EGA (48)
biostudies-arrayexpress (9)
iProX (6)
pride (5)
MetaboLights (3)

Tissue

Cell culture (2)
Bone marrow (1)
Embryonic stem cell (1)
Whole plant (1)

Disease

Colon cancer (1)

Technology Type

Mass Spectrometry (5)
Mass spectrometry (3)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2013 (8)
2025 (5)
2023 (3)
2024 (3)
2010 (1)
2021 (1)
2017 (1)
2012 (1)

CHEBI ID

CHEBI:17148 (3)
CHEBI:17822 (3)
CHEBI:18257 (3)
CHEBI:29016 (3)
CHEBI:15354 (2)
CHEBI:15414 (2)
CHEBI:15428 (2)
CHEBI:15694 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15971 (2)
CHEBI:16015 (2)
CHEBI:16020 (2)
CHEBI:16077 (2)
CHEBI:16264 (2)
CHEBI:16313 (2)
CHEBI:16335 (2)
CHEBI:16347 (2)
CHEBI:16467 (2)
CHEBI:16543 (2)
CHEBI:16552 (2)
CHEBI:16566 (2)
CHEBI:16610 (2)
CHEBI:16615 (2)
CHEBI:16643 (2)
CHEBI:16691 (2)
CHEBI:16709 (2)
CHEBI:16811 (2)
CHEBI:16856 (2)
CHEBI:16857 (2)

Metabolite Name

Aminoadipic acid (2)
Choline (2)
Creatine (2)
Methionine (2)
Proline (2)
Putrescine (2)
Spermidine (2)
Valine (2)
(+)-8'-hydroxyabscisic acid (1)
(-)-11-hydroxy-9,10-dihydrojasmonic acid 11-beta-d-glucoside (1)
(-)-lupinine (1)
(-)-threo-Iso(homo)2-citrate (1)
(11z,14z)-eicosadienoylcarnitine (1)
(1s,2r)-1,2-dihydrodibenzo[b,d]thiophene-1,2-diol (1)
(1s,2r,3s,5s,6s,16e,18e,20r,21s)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,16-trimethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate (1)
(2,7-dimethyloctahydro-1h-cyclopenta[c]pyridin-4-yl)methanol (1)
(2-Amino-1-hydroxyethyl)phosphonate (1)
(2-Naphthyl)methanol (1)
(2R,3S)-2,3-Dimethylmalate (1)
(2e)-2-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-ylidene]-1,6-dioxaspiro[4.4]non-3-ene (1)
(2r,3s)-2-methylcitric acid (1)
(2s,3r,4e,8e)-3-hydroxy-2-[methyl(stearoyl)amino]-4,8-octadecadien-1-yl hydrogen sulfate (1)
(2s,3s,4s,5r,6s)-6-(hydroxymethyl)-5-{[(2r,3s,4s,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)-5-{[(2r,3s,4r,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2,3,4,5-tetrol (1)
(2s,4ar,4br,6as,12bs,12cs,14as)-2-(2-hydroxy-2-propanyl)-12b,12c-dimethyl-3,4,5,6,6a,7,12,12b,12c,13,14,14a-dodecahydro-2h-chromeno[5',6':6,7]indeno[1,2-b]indole-4a(4bh)-carbaldehyde (1)
(2s,4s)-4-amino-2-hydroxy-2-methylpentanedioic acid (1)
(2s,4s)-pinnatanine (1)
(2z)-3-{5-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-yl]-2-furyl}acrylaldehyde (1)
(2z,4z)-2-hydroxyhexa-2,4-dienoic acid (1)
(3-methyl-2-butenyl)-benzene (1)
(3s,5r,6s,7e,9x)-7-megastigmene-3,6,9-triol 9-glucoside (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (1)

Release Date

2021 (51)
2022 (50)
2020 (49)
2025 (48)
2024 (46)
2023 (42)
2018 (34)
2017 (27)
2019 (20)
2016 (20)
2015 (18)
2013 (14)
2012 (7)
2026 (5)
2014 (4)
2011 (4)
2008 (3)
2010 (2)
2007 (2)
1998 (1)

Lab affiliation

Fudan University Shanghai Cancer Center, Shanghai Key Laboratory of Medical Epigenetics, Shanghai Key Laboratory of Radiation Oncology, Institutes of Biomedical Sciences, Fudan University, Shanghai, China. (1)
Institute of molecular and cellular biology (1)
Shanghai Center for Plant Stress Biology (1)
The First Affiliated Hospital, School of Medicine, Zhejiang University (1)
xiangya hospital (1)

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PRODH regultes naive pluripotency by influencing mitochondrial oxidative phosphorylation (Targeted metabolomics)

Naïve human embryonic stem cells (hESCs) that resemble the pre-implantation epiblasts are fueled by a combination of aerobic glycolysis and oxidative phosphorylation, but their mitochondrial regulators are poorly understood. Here we report that, proline dehydrogenase (PRODH), a mitochondria-local...

2024-02-12 | MTBLS7832 | MetaboLights

PRODH regultes naive pluripotency by influencing mitochondrial oxidative phosphorylation (Untargeted metabolomics)

2024-02-12 | MTBLS7840 | MetaboLights

Snt309p, a component of the Prp19p-associated complex that interacts with Prp19p and associates with the spliceosome simultaneously with or immediately after dissociation of U4 in the same manner as Prp19p.

Not available

S-EPMC121462 | biostudies-literature

Human Cytokine Genetic Variants Associated With HBsAg Reverse Seroconversion in Rituximab-Treated Non-Hodgkin Lymphoma Patients.

Not available

S-EPMC4839912 | biostudies-literature

Hepatitis C Virus Subtype and Evolution Characteristic Among Drug Users, Men Who Have Sex With Men, and the General Population in Beijing, China.

Not available

S-EPMC4753893 | biostudies-literature