Hudson J J - OmicsDI

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Unknown (1885)
Proteomics (55)
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Genomics (22)
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Organisms

Andropogon gerardi (52)
Bacteria (52)
Bartonella quintana JK 31 (52)
Canis lupus familiaris (52)
Cnidaria (52)
Ensifer adhaerens (52)
Halictus scabiosae (52)
Human alphaherpesvirus 1 strain 17 (52)
Human alphaherpesvirus 1 strain KOS (52)
Human betaherpesvirus 5 (52)
Human herpesvirus 2 strain 186 (52)
Mesocricetus auratus (52)
Miscanthus x giganteus (52)
Mus musculus (52)
Panicum virgatum (52)
Platyhelminthes (52)
Pseudomonas aeruginosa PA103 (52)
Rabies virus Nishigahara RCEH (52)
Rattus norvegicus (52)
Rattus rattus (52)
Rhodococcus jostii RHA1 (52)
Rhodopseudomonas palustris (52)
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Homo sapiens (35)
Mus musculus (12)
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Oryza sativa (1)
Bordetella pertussis (1)
Rattus norvegicus (1)
Arabidopsis thaliana (1)

Organisms

Homo sapiens (1)

Repository

pride (52)
biostudies-arrayexpress (33)
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geo (1)
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Disease

Cardiovascular system disease (5)
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Technology Type

Mass Spectrometry (52)
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SWATH MS (4)
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Illumina 1.2M, Illumina 610K Quad, Affymetrix 6.0 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina HiSeq 2500 (1)
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Instrument Platform

Nuclear Magnetic Resonance (NMR) - (4)
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454 GS (1)
Illumina HiSeq 4000 (1)
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Liquid Chromatography MS - positive - reverse phase (1)

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2025 (12)
2023 (12)
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2026 (9)
2014 (8)
2012 (7)
2016 (4)
2013 (4)
2015 (4)
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2005 (3)
2017 (3)
2018 (3)
2011 (2)
2010 (2)
2008 (2)
2019 (2)
2009 (1)
2007 (1)
2002 (1)
2020 (1)
2024 (1)

CHEBI ID

CHEBI:16449 (5)
CHEBI:18186 (4)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:27266 (4)
CHEBI:15366 (4)
CHEBI:25094 (4)
CHEBI:78320 (4)
CHEBI:16737 (4)
CHEBI:16919 (4)
CHEBI:26271 (3)
CHEBI:27570 (3)
CHEBI:17234 (3)
CHEBI:28044 (3)
CHEBI:1148 (3)
CHEBI:17724 (3)
CHEBI:17568 (3)
CHEBI:15428 (3)
CHEBI:15724 (3)
CHEBI:17368 (3)
CHEBI:18101 (2)
CHEBI:91315 (2)
CHEBI:70959 (2)
CHEBI:17626 (2)
CHEBI:30751 (2)
CHEBI:37684 (2)
CHEBI:26986 (2)
CHEBI:18064 (2)
CHEBI:73685 (2)
CHEBI:16870 (2)

Metabolite Name

Acetate (2)
Alanine (2)
Proline (2)
Creatinine (2)
Creatine (2)
Hypoxanthine (2)
Decadienoylcarnitine (C10:2) (1)
Tiglylcarnitine (C5:1) (1)
1,1-Dimethylbiguanide (Metformin) (1)
Hexanoylcarnitine (C6:0) (1)
Octenoylcarnitine (C8:1) (1)
Asymmetric Dimethylarginine (1)
3-Hydroxyisobutyrate (1)
Nicotinurate (1)
2-hydroxy-butyrate (1)
2-methyl-butyrate (1)
2-Octenoylcarnitine CAR(8:1) (1)
2-Hydroxybutyrate (1)
Proline Betaine (1)
1,3-Diaminopropane (1)
Valerate (1)
N1-methyl-4-pyridone-3-carboxamide (1)
2-Hydroxyglutarate (1)
Acetoacetic acid (1)
Propionate (1)
Cadaverine (1)
N,N-Dimethylglycine (1)
Hydrocinnamic acid (1)
Dimethyl sulfone (1)
Urocanate (1)

First Public Date

2014 (1)

Study type

Transcription profiling by array (21)
RNA-seq of coding RNA (4)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
ChIP-chip by array (1)
Other (1)
ChIP-seq (1)
Genotyping by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (202)
2022 (192)
2023 (179)
2024 (169)
2021 (168)
2020 (149)
2019 (124)
2017 (107)
2016 (97)
2015 (89)
2018 (86)
2014 (64)
2012 (56)
2013 (53)
2011 (39)
2026 (38)
2010 (27)
2009 (23)
2008 (16)
2007 (8)
2005 (8)
2006 (5)
2001 (4)
2002 (3)
2000 (3)
2004 (2)
2003 (2)
1999 (2)
1998 (2)

Lab affiliation

The University of Melbourne (8)
Cardiac Bioengineering group, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia (2)
Centre for Innate Immunity and Infectious diseases, Hudson Institute of Medical Research, Clayton 3168, Australia (2)
Hudson Institute of Medical Research Department of Molecular and Translational Science, Monash University Faculty of Medicine, Nursing and Health Sciences 27-31 Wright Street, Clayton VIC 3168, AUSTRALIA (2)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (2)
1 Hudson Institute of Medical Research, Clayton, VIC, Australia, 2 Department of Molecular and Translational Sciences, Monash University, Clayton, VIC, Australia (1)
1-Department of protein Science, KTH Royal Institute of Technology, Stockholm, Sweden 2-Science for Life Laboratory, Stockholm, Sweden (1)
1-Department of protein Science, KTH Royal Institute of Technology, Stockholm, Sweden, 2-Science for Life Laboratory, Stockholm, Sweden (1)
1.School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Geelong 3216, Australia 2.Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research, 3168 Melbourne, Australia 3.Department of Molecular and Translational Science, Monash University, 3168 Melbourne, Australia (1)
1The Ritchie Centre, Hudson Institute of Medical Research.Shanti Gurung1(shanti.gurung@hudson.org.au) Jacqueline Piskopos1(jpis0002@student.monash.edu) Joel Steele2 (joel.steele@monash.edu) Ralf Schittenhelm2 (ralf.schittenhelm@monash.edu) Anup Shah2 (anup.shah@monash.edu) Fiona Cousins1 (fiona.cousins@hudson.org.au) Thomas Tapmeier1,3 (thomas.tapmeier@monash.edu) Caroline E. Gargett1,3 (caroline.gargett@hudson.org.au) (1)
BioArch South, Waitati, New Zealand (1)
Biology Department University of Massachusetts Boston Boston, USA (1)
Cambridge Institute for Medical Research, University of Cambridge (1)
Cardiac Bioengineering Lab, QIMR Berghofer Medical Research Institute, Brisbane, QLD, AUS (1)
Cardiac Bioengineering lab, QIMR Berghofer Medical Research Institute, Herston, QLD, AUD (1)
Centre for Cancer Research, Hudson Institute of Medical Research, Clayton, Australia. Department of Medicine, School of Clinical Sciences, Monash University, Clayton, Australia. 2 Department of Medicine, School of Clinical Sciences, Monash University, Clayton, Australia. 3 Monash Proteomics and Metabolomics Platform, Clinical Proteomics Node, School of Clinical Sciences, Monash University, Clayton, Australia (1)
Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research and Department of Molecular and Translational Sciences, Monash University, Clayton, Victoria, Australia. (1)
Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research, Clayton, Victoria, Australia (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Cancer Research and Molecular Medicine Faculty of Medicine Laboratory Centre, 5th floor. Erling Skjalgssons gt. 1 Norwegian University of Science and Technology NTNU 7006 Trondheim, Norway Tel: +47 72573076; Fax: +47 72576400 Cell. phone: +47 91825455 (1)
Department of Chemistry & Chemical Biology, Northeastern University (1)
Department of Chemistry, Biological Sciences, Microbiolgy and Immunology at Vanderbilt University (1)
Department of Clinical Pharmacy, University of Michigan College of Pharmacy (1)
Director and CEO, Hudson Institute of Medical Research Head, Department of Molecular and Translational Science, Monash University Faculty of Medicine, Nursing and Health Sciences 27-31 Wright Street, Clayton VIC 3168, AUSTRALIA (1)
Head of the Department of Protein Science, Division of Systems Biology at the Royal Institute of Technology (KTH), Stockholm, Sweden (1)
Hudson Institute of Medical Research (1)
KTH Royal Institute of Technology, Departement of Protein Science, Division of Systems Biology (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan. (1)
Molecular Plant Biology, Department of Life Technologies, University of Turku, Finland (1)

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xref:PubMed:25267065 (1)

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J-Resolved 1H NMR 1D-Projections for Large-Scale Metabolic Phenotyping Studies: Application to Blood Plasma Analysis

1H nuclear magnetic resonance (NMR) spectroscopy-based metabolic phenotyping is now widely used for large-scale epidemiological applications. To minimize signal overlap present in 1D 1H NMR spectra, we have investigated the use of 2D J-resolved (JRES) 1H NMR spectroscopy for large-scale phenotyping ...

2018-07-23 | MTBLS540 | MetaboLights

Mapping Clinical and Expression QTL in a Sex-Dependent Effect of Host Susceptibility to Influenza H3N2/HK/1/68-MA20

Seasonal influenza outbreaks and recurrent influenza pandemics present major challenges to public health. By studying immunological responses to influenza in different host species, it may be possible to discover common mechanisms of susceptibility in response to various influenza strains. This coul...

ORGANISM(S): Mus musculus

2012-05-01 | E-GEOD-35888 | biostudies-arrayexpress

Gene expression of CD66 expressing cells in cervical precancer cell line

Gene Expression profiles of sorted CD66High and CD66Low cells were generated from CIN612-9E cells grown in Emedia. We have analyzed the gene expression pattern of CD66High and CD66Low cells from CIN612 9E. These cells are derived from a cervical precancer lesion (M. Bedell, J. Hudson, T. Golub et al...

ORGANISM(S): Homo sapiens

2014-09-30 | GSE59322 | GEO

Differential Effects of Sulfur Amino Acid-Restricted and Low-Calorie Diets on Gut Microbiome Profile and Bile Acid Composition in Male C57BL6/J Mice.

Not available

S-EPMC8514071 | biostudies-literature

Gene expression of CD66 expressing cells in cervical precancer cell line

ORGANISM(S): Homo sapiens

2014-09-30 | E-GEOD-59322 | biostudies-arrayexpress

Labrador Sea freshening at 8.5 ka BP caused by Hudson Bay Ice Saddle collapse.

Not available

S-EPMC6362222 | biostudies-literature

Spatial patterns of pharmaceuticals and wastewater tracers in the Hudson River Estuary.