Hunter K K - OmicsDI

Show results for

Unknown (2848)
Transcriptomics (514)
Genomics (178)
Proteomics (61)
Metabolomics (20)

Organisms

Drosophila melanogaster (570)
Homo sapiens (83)
Mus musculus (27)
Arabidopsis thaliana (9)
Caenorhabditis elegans (7)
Apis mellifera (4)
Eugenia uniflora (3)
Escherichia coli (3)
Amphimedon queenslandica (2)
Canis lupus familiaris (2)
Gallus gallus (2)
Rattus norvegicus (2)
Cereibacter sphaeroides 2.4.1 (2)
Klebsiella pneumoniae (2)
Klebsiella variicola (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Hypsibius dujardini (1)
Mnemiopsis leidyi (1)
Branchiostoma belcheri (1)
Rhipicephalus microplus (1)
Strongylocentrotus purpuratus (1)
Platynereis dumerilii (1)
Bombyx mori (1)
Ciona intestinalis (1)
Sycon ciliatum (1)
Nematostella vectensis (1)
Glycine max (1)
Danio rerio (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Organisms

Rhipicephalus microplus (1)

Repository

biostudies-arrayexpress (658)
pride (46)
EGA (33)
MetaboLights (20)
MassIVE (12)
PanoramaPublic (3)
ENA (1)

Tissue

Cell culture (17)
Blood cell (5)
Epithelial cell (3)
Fibroblast (3)
Permanent cell line cell (3)
Whole body (3)
Blood (2)
Blood plasma (2)
Blood serum (2)
Brain (2)
Primary cell (2)
Adult organism (1)
Bone marrow (1)
Bronchoalveolar lavage (1)
Caput epididymis (1)
Cell suspension culture (1)
Colon (1)
Dental plaque (1)
HeLa cell (1)
Monocyte (1)
Other source (1)
Photosynthetic cell (1)
Primary cell line cell (1)
Retina (1)
Seminal fluid (1)
T cell (1)
U2-OS cell (1)
Uterine endometrium (1)

Disease

Acute leukemia (3)
Colon cancer (2)
Diffuse midline glioma (2)
Human cytomegalovirus infection (2)
Not applicable (1)
Chronic granulomatous disease (1)
IRAK-4 Q293X mutation (1)
Infected (1)
IBDV infected (1)
S enteritidis (1)
Normal (1)
Developmental and epileptic encephalopathy 9 (1)
Disease free (1)
Endometrial cancer (1)
Multiple myeloma (1)
Plasmodium falciparum malaria (1)
Plasmodium vivax malaria (1)
Sarcoidosis (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (46)
Shotgun proteomics (30)
Mass spectrometry (18)
SWATH MS (7)
Top-down proteomics (4)
Bottom-up proteomics (3)
Mass spectrometry assay (2)
Data-dependent acquisition (2)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina OncoArray (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - negative - reverse phase (8)
Q Exactive (6)
Illumina HiSeq 2000 (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Scanning hardware (2)
Axon GenePix 4000B scanning hardware (2)
Illumina NovaSeq 6000 (2)
Orbitrap Exploris 480 (2)
6490 Triple Quadrupole LC/MS (Agilent) (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
I.DOT (Dispendix), C.WASH (CYTENA), Qubit Fluorometer (Thermo Fisher Scientific), Agilent TapeStation 4200 (1)
BD FACSDiscover S8 (1)
Other (1)
Illumina Genome Analyzer II (1)
NextSeq 2000 (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap Velos (1)
LTQ Velos (1)
Orbitrap Fusion (1)
TripleTOF 5600 (1)
ZenoTOF 7600 (1)
6224 TOF CE-MS (Agilent) (1)
6540 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - - reverse phase (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2013 (304)
2011 (185)
2010 (81)
2012 (19)
2016 (15)
2021 (14)
2022 (13)
2023 (13)
2015 (12)
2008 (10)
2024 (10)
2019 (9)
2025 (8)
2014 (7)
2018 (7)
2026 (6)
2007 (6)
2004 (6)
2009 (5)
2020 (4)
2006 (2)
2017 (1)
2005 (1)

CHEBI ID

CHEBI:17368 (4)
CHEBI:17596 (4)
CHEBI:17712 (4)
CHEBI:17964 (4)
CHEBI:15354 (3)
CHEBI:16020 (3)
CHEBI:16335 (3)
CHEBI:16347 (3)
CHEBI:16919 (3)
CHEBI:17490 (3)
CHEBI:30769 (3)
CHEBI:64446 (3)
CHEBI:64563 (3)
CHEBI:64569 (3)
CHEBI:72384 (3)
CHEBI:73024 (3)
CHEBI:91296 (3)
CHEBI:134270 (2)
CHEBI:134428 (2)
CHEBI:140947 (2)
CHEBI:15428 (2)
CHEBI:15551 (2)
CHEBI:15553 (2)
CHEBI:15603 (2)
CHEBI:15647 (2)
CHEBI:15756 (2)
CHEBI:16196 (2)
CHEBI:16344 (2)
CHEBI:16414 (2)
CHEBI:16450 (2)

Metabolite Name

Hypoxanthine (3)
Creatine (2)
Hippuric acid (2)
L-Phenylalanine (2)
Oleic acid (2)
Ornithine (2)
PC (16:0/18:1) (2)
PC 32:0 (16:0/16:0) (2)
PC 36:4 (18:2/18:2) (2)
(1R,2R,3S,1′R)-nepetalinic acid (1)
(3-Carboxypropyl)trimethylammonium cation (1)
(Z)-3-methyl-4-decenoic acid (1)
1'-Hydroxymidazolam .beta.-D-glucuronide (1)
1,2-Dilinoleoyl-sn-glycero-3-phosphocholine (1)
1,2-Dipalmitoyl-sn-glycero-O-ethyl-3-phosphatidylcholine cation (1)
1,5-Pentanediamine (1)
1-Methyladenosine (1)
1-palmitoyllysophosphatidylcholine (1)
10-HDoHE (1)
11-HDoHE (1)
11-HETE (1)
12,13-DiHODE (1)
12,13-DiHOME (1)
12,13-EpOME (1)
12-HETE (1)
12S-HEPE (1)
12S-HHTrE (1)
13-HDoHE (1)
13-HODE (1)
13-KODE (1)

First Public Date

2014 (1)

Study type

ChIP-chip by tiling array (386)
ChIP-seq (144)
Transcription profiling by array (52)
RNA-seq of coding RNA (38)
RNA-seq of non coding RNA (29)
RNA-seq of coding RNA from single cells (3)
Genotyping by array (2)
Transcription profiling by tiling array (1)
4C (1)
Comparative genomic hybridization by array (1)
Other (1)

Release Date

2013 (384)
2022 (323)
2021 (293)
2025 (266)
2024 (255)
2023 (247)
2020 (237)
2011 (232)
2019 (183)
2016 (149)
2018 (148)
2015 (146)
2017 (136)
2010 (126)
2014 (105)
2012 (92)
2009 (49)
2026 (45)
2008 (42)
2007 (14)
2006 (12)
2004 (7)
2005 (6)
2003 (3)
2001 (2)
2002 (1)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Bioplatforms Australia (7)
School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, and Precision Medicine Research Program, Hunter Medical Research Institute, NSW, 2308, Australia (2)
1. Cancer Signalling Research Group, School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA 2. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA 3. Paediatric Program, Mark Hughes Foundation Centre for Brain Cancer Research, College of Health, Medicine, and Wellbeing, Callaghan, NSW, AUSTRALIA (1)
1School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, NSW, 2308, Australia 2 Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, 2305, Australia (1)
Alexander Schmidt, Biozentrum, University of Basel Spitalstrasse 41, CH-4056 Basel, Switzerland Tel. +41 61 207 0927, https://www.biozentrum.unibas.ch (1)
Alexander Schmidt, Biozentrum, University of Basel, Spitalstrasse 41, CH-4056 Basel, Switzerland, Tel. +41 61 207 0927, https://www.biozentrum.unibas.ch (1)
Associate Professor Systems Virology Department of Translation medicine Faculty of Medicine Lund University Sweden (1)
Associate Professor, Department of Biology, Massachusetts Institute of Technology Whitehead Institute of Biomedical Research (1)
Biobanking Group, Branch Of IBMC "Scientific and Educactional Center" (1)
Bioplatforms Australia (project manager) (1)
Biosciences and bioengineering Department, IIT Bombay (1)
British Antarctic Survey High Cross, Madingley Rd, Cambridge, CB3 0ET (1)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (1)
Cambridge Institute for Medical Research, University of Cambridge (1)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (1)
Cancer Signalling Research Group, School of Biomedical Science and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA. (1)
DTU Bioengineering (1)
Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK; Department of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1PD, UK. (1)
Department of Molecular Biology and Biotechnology, University of Sheffield, UK (1)
Dr. KB Lab (Host Pathogen Interaction Lab), Senior Professor and Head, Department of Biotechnology, Alagappa University, Karaikudi (lab head) (1)
Dr. Sanjeeva Srivastava, Proteomics Laboratory, Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India (Lab head). (1)
Eberhard Karls University Tübingen Faculty of Science, Interfaculty Institute of Cell Biology Auf der Morgenstelle 15 72076 Tübingen Germany (1)
GLOBE Institute, University of Copenhagen (Denmark) (1)
Markus M. Rinschen Associate Professor Department of Biomedicine Aarhus University DK-8000C Aarhus (1)
Molecular Biology and Biotechnology, University of Sheffield, UK (1)
Priority Research Centre for Reproductive Science, School of Environmental and Life Sciences, College of Engineering, Science and Environment, The University of Newcastle, NSW, Australia. Infertility and Reproduction Research Program, Hunter Medical Research Institute, NSW, Australia. (1)
Professor in Parasitology at Aberystwyth University (1)
Professor, Department of Biotechnology, Alagappa University, Karaikudi (1)
School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, and Cancer Research Program, Hunter Medical Research Institute, NSW, 2308, Australia (1)
School of Biomedical Sciences and Pharmacy, Priority Research Centre for Reproductive Science, Mothers and Babies Research Centre, Hunter Medical Research Institute, University of Newcastle, Newcastle, New South Wales, Australia (1)

Tags

xref:PubMed:21712043 (1)

Previous page
1 / 363
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 363
Next page

Sort by:

Relevance

Page size

The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (ChIP-seq)

This study was aimed at understanding the genome-wide binding and regulatory role of the DAXX transcriptional repressor, recently implicated in PCa. ChIP-Seq analysis of genome-wide distribution of DAXX in PC3 cells revealed over 59,000 DAXX binding sites, found at regulatory enhancers and promoters...

ORGANISM(S): Homo sapiens

2015-06-24 | E-GEOD-68647 | biostudies-arrayexpress

The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (RNA-seq)

ORGANISM(S): Homo sapiens

2015-06-24 | E-GEOD-68645 | biostudies-arrayexpress

Acute Stress Induced Increase in Histone H3 Lys 9 Trimetylation in Rat Hippocampus

We utilized ChIP Seq to examine the the genomic localization of the increase in H3K9 trimethylation we had previously observed in the hippocampus as a consequence of acute restraint stress in rats (Hunter et. al PNAS 2009). Rats were restrained for 30 minutes, allowed to recover for 1 hour and then ...

ORGANISM(S): Rattus norvegicus

2012-11-02 | E-GEOD-41217 | biostudies-arrayexpress

Regulation of interleukin-1 beta secretion from macrophages via modulation of potassium ion (K⁺ ) channel activity.

Not available

S-EPMC6557664 | biostudies-literature

The ancient cline of haplogroup K implies that the Neolithic transition in Europe was mainly demic.

Not available

S-EPMC5594011 | biostudies-literature

Blocking anaplerotic entry of glutamine into the TCA cycle sensitizes K-Ras mutant cancer cells to cytotoxic drugs.

Not available

S-EPMC4418945 | biostudies-literature

pH sensing in the two-pore domain K+ channel, TASK2.