Huynh B B - OmicsDI

OmicsDI

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Unknown (784)
Proteomics (32)
Transcriptomics (27)
Metabolomics (8)
Genomics (6)

Organisms

Homo sapiens (34)
Mus musculus (17)
Escherichia coli O157:H7 (2)
Pseudomonas syringae pv. tomato str. DC3000 (2)
Rattus norvegicus (2)
Macaca fascicularis (1)
Staphylococcus aureus (1)
Caenorhabditis elegans (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Bacteria (1)
Escherichia coli (1)
Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2 (1)
Peromyscus (1)
Toxoplasma gondii GT1 (1)

Repository

biostudies-arrayexpress (33)
pride (22)
MetaboLights (8)
EGA (4)
PanoramaPublic (4)
MassIVE (2)

Tissue

Cell culture (4)
Brain (2)
Blood cell (1)
Blood serum (1)
Breast cancer cell (1)
Brown adipose tissue (1)
Cardiac muscle cell (1)
Embryonic fibroblast (1)
Epithelial cell (1)
Erythrocyte (1)
Heart (1)
Kidney (1)
Liver (1)
Microglial cell (1)
Neuron (1)
Skeletal muscle (1)
T cell (1)

Disease

Chronic gastritis (1)
Alzheimer's disease (1)
Breast cancer (1)
Human immunodeficiency virus infectious disease (1)
Pulmonary tuberculosis (1)

Technology Type

Mass Spectrometry (22)
Shotgun proteomics (12)
Mass spectrometry (8)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2000 (2)
Gas Chromatography MS - positive (2)
Q Exactive (2)
Spectronic Helios Alpha UV-Vis spectrophotometer (1)
418 [Affymetrix] (1)
Orbitrap Fusion (1)
Orbitrap Fusion Lumos (1)

Publication Date

2023 (8)
2012 (7)
2013 (6)
2025 (5)
2016 (5)
2022 (4)
2021 (4)
2026 (4)
2010 (3)
2024 (3)
2020 (3)
2015 (2)
2014 (2)
2011 (2)
2007 (2)
2019 (2)
2009 (1)
2008 (1)
2018 (1)
2017 (1)

CHEBI ID

CHEBI:15891 (5)
CHEBI:16919 (5)
CHEBI:17533 (5)
CHEBI:18237 (5)
CHEBI:37024 (5)
CHEBI:15428 (4)
CHEBI:16027 (4)
CHEBI:16113 (4)
CHEBI:16235 (4)
CHEBI:16668 (4)
CHEBI:16737 (4)
CHEBI:17015 (4)
CHEBI:17126 (4)
CHEBI:17151 (4)
CHEBI:17562 (4)
CHEBI:17568 (4)
CHEBI:17596 (4)
CHEBI:22660 (4)
CHEBI:24266 (4)
CHEBI:27897 (4)
CHEBI:30769 (4)
CHEBI:30831 (4)
CHEBI:30915 (4)
CHEBI:32816 (4)
CHEBI:33508 (4)
CHEBI:6650 (4)
CHEBI:7916 (4)
CHEBI:133032 (3)
CHEBI:141588 (3)
CHEBI:15318 (3)

Metabolite Name

1-(1-enyl-palmitoyl)-GPE (P-16:0)* (2)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (2)
1-linoleoyl-GPE (18:2)* (2)
1-methylhistamine (2)
1-methylhistidine (2)
1-methylnicotinamide (2)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* (2)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (2)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (2)
1-palmitoyl-GPC (16:0) (2)
1-palmitoyl-GPE (16:0) (2)
1-stearoyl-2-oleoyl-GPC (18:0/18:1) (2)
2-hydroxyacetaminophen sulfate* (2)
2-hydroxybutyrate/2-hydroxyisobutyrate (2)
2-hydroxyglutarate (2)
3-(cystein-S-yl)acetaminophen* (2)
3-amino-2-piperidone (2)
3-aminoisobutyrate (2)
3-formylindole (2)
3-hydroxy-3-methylglutarate (2)
3-indoxyl sulfate (2)
3-ketosphinganine (2)
4-acetamidophenol (2)
4-acetaminophen sulfate (2)
4-chlorobenzoic acid (2)
4-cholesten-3-one (2)
4-methyl-2-oxopentanoate (2)
5-oxoproline (2)
AMP (2)
Acetylcarnitine (2)

Study type

Transcription profiling by array (16)
RNA-seq of coding RNA (7)
Proteomic profiling by array (4)
ChIP-chip by tiling array (1)
Genotyping by array (1)
ChIP-seq (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (120)
2024 (110)
2022 (91)
2023 (90)
2021 (90)
2020 (47)
2018 (36)
2019 (35)
2012 (28)
2017 (28)
2014 (25)
2016 (19)
2013 (19)
2015 (18)
2011 (16)
2026 (14)
2010 (10)
2009 (9)
2007 (5)
2006 (2)
2003 (2)
2008 (1)
2004 (1)
2002 (1)

Lab affiliation

1Lester and Sue Smith Breast Center and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA (1)
Ann Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, USA (1)
Assistant Professor Department of Medicine, Division of Endocrinology, Metabolism, and Nutrition Department of Pharmacology and Cancer Biology Duke University Medical Center (1)
Associate Professor of Biochemistry Associate Professor of Cell Biology Duke University School of Medicine (1)
Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna (1)
Department of Biochemistry and Molecular Biology, Lipoproteins and Atherosclerosis Monash University, Australia Baker Heart and Diabetes Institute, Australia (1)
Department of Biochemistry and Pharmacology, The Bio21 Molecular Science & Biotechnology Institute, University of Melbourne, Melbourne, Australia (1)
Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA (1)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia (1)
Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD, USA (1)
Duke University Dept of Biochemistry (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
Lung Cancer Epigenetics Research Group Max Planck Institute for Heart and Lung Research (1)
Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA 91125 (1)
Telethon Institute of Genetics and Medicine (TIGEM), Pozzuoli, Italy. Department of Translational Medicine, University of Naples "Federico II", Italy. Department of Molecular and Human Genetics, Baylor College of Medicine, Jan and Dan Duncan Neurological Research Institute, Houston, TX, USA. (1)
The Department of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina (1)
University Center for Bioscience and Biotechnology, National Cheng Kung University (1)
University of Bristol (1)
University of Colorado - Anschutz Medical Campus, Department of Biochemistry and Molecular Genetics, Aurora, CO USA (1)
University of Melbourne (1)
Weill Cornell Medicine, Department of Biochemistry 1300 York Avenue, Box #63 Room A-108 New York, NY 10065 (1)
Yale University, Department of Neurology and Neuroscience (1)