Igg antibodies - OmicsDI

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Unknown (9271)
Transcriptomics (1173)
Genomics (1137)
Proteomics (477)
Other (17)
Metabolomics (10)
Models (4)
Clinical (1)
Multiomics (1)

Organisms

Mus musculus (718)
Homo sapiens (716)
Caenorhabditis elegans (140)
Drosophila melanogaster (51)
Saccharomyces cerevisiae (39)
Bos taurus (26)
Rattus norvegicus (21)
Sus scrofa (17)
Schizosaccharomyces pombe (14)
Arabidopsis thaliana (13)
Escherichia coli str. K-12 substr. MG1655 (10)
Macaca mulatta (9)
Gallus gallus (9)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (7)
Geobacter sulfurreducens PCA (6)
Salmonella enterica subsp. enterica serovar Typhimurium (5)
Mycobacterium tuberculosis (5)
Klebsiella pneumoniae (4)
Glycine max (3)
Danio rerio (3)
Oryctolagus cuniculus (3)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (2)
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (2)
Saccharomyces cerevisiae SK1 (2)
Bombyx mori (2)
Pan troglodytes (2)
Streptococcus pyogenes (2)
Mycolicibacterium smegmatis MC2 155 (2)
Influenza A virus (A/X-31(H3N2)) (1)
Murinae (1)

Organisms

Homo sapiens (266)
Mus musculus (186)
Anopheles gambiae (7)
Macaca mulatta (5)
Drosophila melanogaster (5)
Macaca fascicularis (5)
mouse gut metagenome (5)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (4)
Rattus norvegicus (4)
Klebsiella pneumoniae (4)
Plasmodium falciparum (3)
Caenorhabditis elegans (3)
Arabidopsis thaliana (3)
Sus scrofa (3)
Gallus gallus (2)
Mus (2)
unidentified (2)
recombinant coronavirus (1)
Oxytricha trifallax (1)
Aegilops tauschii x Triticum aestivum (1)
Xenopus tropicalis (1)
Oryctolagus cuniculus (1)
Aedes aegypti (1)
Xenopus laevis (1)
Bacillus subtilis (1)
Bos taurus (1)
Saccharomyces cerevisiae (1)
Ascaris suum (1)
synthetic construct (1)

Repository

biostudies-arrayexpress (1633)
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pride (268)
geo (189)
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EGA (7)
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NODE (3)
BioModels (1)
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GPMDB (1)

Tissue

Cell culture (72)
Brain (26)
Blood serum (23)
Blood plasma (21)
Permanent cell line cell (15)
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Blood cell (10)
B cell (8)
Cell suspension culture (8)
Liver (6)
Blood (6)
Fibroblast (5)
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T cell (4)
Stem cell (4)
Monocyte (3)
Colon (3)
Embryonic stem cell (3)
Lung (2)
Rheumatoid arthritis disease specific synovial fluid (2)
Breast cancer cell line (2)
Egg (2)
U2-OS cell (2)
Primary cell (2)
Cerebral cortex neuron (2)
Dendritic cell (2)
HeLa cell (2)
Oocyte (2)
Cell line (1)

Disease

Breast cancer (10)
Disease free (8)
COVID-19 (7)
Acute leukemia (7)
Colon cancer (6)
Non-small cell lung carcinoma (5)
Influenza (4)
Cancer (3)
Malignant neoplasm of ovary (3)
Benign prostatic hyperplasia (2)
Systemic lupus erythematosus (1)
Autoimmune disorder (1)
Mild hyperglycemia, liver dysfunction, and renal glycosuria (1)
Sjogren's syndrome (1)
Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus (1)
Internal Carotid Artery Stenosis (NCI Metathesaurus C0340569) has DiseaseStaging Asymptomatic (1)
Carotid artery disease: ASYMPTOMATIC high-grade inner carotid artery stenosis (1)
Epidermoid carcinoma (1)
Fibrosis (1)
Infected (1)
Acute myelomonocytic leukaemia (1)
IBDV infected (1)
Head and neck squamous cell carcinoma (1)
IgG negative for EV71 and CA21 (1)
Hepatocellular carcinoma (1)
Carcinoma (1)
Breast carcinoma (1)
Normal (1)
Colorectal Neoplasms (1)
Not Available (1)

Technology Type

Mass Spectrometry (268)
Affinity purification coupled with mass spectrometry proteomics (93)
Shotgun proteomics (91)
Bottom-up proteomics (56)
Gel-based experiment (35)
Data-dependent acquisition (35)
Top-down proteomics (13)
Mass spectrometry (9)
Data-independent acquisition (9)
Immunopeptidomics (7)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Glycoproteomics (3)
SWATH MS (3)
MSE (2)
DiaPASEF (2)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
Proteogenomics (1)
Affinity proteomics (1)
All-ion fragmentation (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (58)
Illumina HiSeq 2500 (45)
Illumina HiSeq 2000 (39)
Illumina HiSeq 4000 (30)
NextSeq 500 (29)
NextSeq 550 (24)
Illumina MiSeq (13)
NextSeq 2000 (11)
Illumina HiSeq 1500 (7)
Illumina Genome Analyzer IIx (6)
Illumina NovaSeq X (5)
AB SOLiD 4 System (4)
Illumina Genome Analyzer II (4)
Vortex (4)
Illumina HiSeq 1000 (3)
Flow Cytometer (2)
NA (2)
Illumina HiSeq 3000 (2)
Cellranger (1)
FACS BD Aria II & III (1)
KAPA RNA HyperPrep Kit (1)
KAPA EvoPrep Kit (1)
Nanodrop 2000c spectrophotometer (1)
Thermomixer (1)
Illumina Genome Analyzer Iix (1)
10X Genomics Chromium (1)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson) (1)
Fluidigm C1 autoprep system (1)
Agilent DNA Microarray Scanner Model #G2565BA (1)
Solexa 2G Genome Analyzer (1)

Publication Date

2013 (275)
2014 (197)
2015 (194)
2010 (183)
2012 (173)
2011 (139)
2016 (128)
2024 (123)
2026 (96)
2022 (94)
2021 (84)
2025 (83)
2023 (83)
2020 (50)
2019 (48)
2018 (48)
2008 (48)
2017 (42)
2009 (42)
2007 (16)
2005 (9)
2006 (7)
2004 (4)
2002 (1)

CHEBI ID

CHEBI:16359 (4)
CHEBI:28484 (3)
CHEBI:30772 (3)
CHEBI:16525 (3)
CHEBI:80774 (3)
CHEBI:16755 (3)
CHEBI:16135 (3)
CHEBI:30768 (3)
CHEBI:15611 (3)
CHEBI:28683 (3)
CHEBI:15428 (3)
CHEBI:16865 (3)
CHEBI:37070 (2)
CHEBI:45571 (2)
CHEBI:18300 (2)
CHEBI:91315 (2)
CHEBI:15366 (2)
CHEBI:78320 (2)
CHEBI:30745 (2)
CHEBI:53487 (2)
CHEBI:16796 (2)
CHEBI:9907 (2)
CHEBI:43580 (2)
CHEBI:27781 (2)
CHEBI:32365 (2)
CHEBI:64566 (2)
CHEBI:72999 (2)
CHEBI:50129 (2)
CHEBI:16411 (2)
CHEBI:28834 (2)

Metabolite Name

Kynurenine (2)
Tryptophan (2)
Nonadeca-10Z-enoic acid (1)
6-Octadecylenic acid (1)
Bishomo-gamma-linolenic acid (1)
N-Acetyl-alpha-neuraminic acid (1)
3-Aminobenzoic acid (1)
5-Amino-levulinic acid (1)
L-Alanine-d3 (1)
D-Valine-d8 (1)
5-Oxo-L-prolyl-proline (1)
Lyso-Phosphatidylcholine (LPC) C18:1 (1)
Lyso-Phosphatidylcholine (LPC) C14:0 (1)
Acetylcarnitine C2 (1)
Indole-3-propionate (1)
3-Indoleacetate (1)
Tauroursodeoxycholate (1)
Sodium taurodeoxycholate hydrate (1)
Sodium taurolithocholate (1)
Glycoursodeoxycholate (1)
Sodium glycochenodeoxycholate (1)
3alpha-Hydroxy-12-oxo-5beta-chol-6-en-24-oic acid (1)
3alpha,7alpha-Dihydroxy-12-oxo-5beta-cholanoic acid (1)
Lithocholate (1)
7-Ketodeoxycholate (1)
TG(16:0/22:5/18:1) or TG(20:4/18:1/18:1) (1)
PC(O-38:3) or PC(P-38:2) (1)
N6-methyl-2’-deoxyadenosine (1)
Sodium taurocholate (1)
Glycolithocholate (1)

First Public Date

2025 (97)
2024 (95)
2026 (64)
2023 (64)
2014 (64)
2022 (57)
2021 (41)
2020 (34)
2019 (24)
2017 (23)
2015 (23)
2018 (17)
2016 (15)
2013 (14)

Modelling Approach

Ordinary differential equation model (1)

Study status

Completed (1)

Lab affiliation

University of Oxford (5)
Head of the Curie Institute Mass Spectrometry Platform (5)
Institute of Medical Microbiology, University of Zurich (4)
Molecular Leukemogenesis Group, German Cancer Research Center, Heidelberg, Germany Heidelberg University, Medical Faculty, Heidelberg, Germany, 6Internal Medicine V, Heidelberg University Hospital, Heidelberg, Germany (3)
Cancer Science Institute of Singapore, National University of Singapore (3)
Head of System Biology Lab. at Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency (3)
Utrecht University (3)
Eppley Institute for Research in Cancer University of Nebraska Medical Center Omaha, NE 68198, USA (2)
Center for Systems and Synthetic Biology Institute for Cellular and Molecular Biology Department of Molecular Biosciences University of Texas at Austin (2)
Institute of Gene Biology, Russian Academy of Sciences, Group of Chromatin Biology (2)
Cancer Research UK Cambridge Institute, University of Cambridge (2)
Peter MacCallum Cancer Centre, Melbourne, Australia Department of Anatomy and Physiology, The University of Melbourne, Melbourne, VIC, Australia (2)
Chongqing Medical University (2)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (2)
Institut für Molekularbiologie und Tumorforschung (IMT) Biomedizinisches Forschungszentrum Philipps-Universität Marburg Hans-Meerwein-Straße 2 35043 Marburg (Germany) Phone: +49-(0)6421-28-66840 (1)
Department of Neuroscience , Tufts University (1)
PI The Wistar Institute, Philadelphia, PA, USA; (1)
Immunology,College of Medicine and Public Health, Flinders University (1)
Professor Department of Laboratory Medicine and Pathology Mayo Clinic 200 First St SW, Rochester, MN – 55905, USA (1)
Institute for Cell and Molecular Biology, Department of Molecular Biosciences 2500 Speedway, MBB 3.312B Austin, TX 78712-1095, USA (1)
Centre for Healthy Brain Ageing, School of Psychiatry, University of New South Wales, Sydney, NSW, 2052, Australia (1)
Laboratory of Cellular and Structural Biology (1)
Oslo University Hospital, Oslo, Norway (1)
Smurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland (1)
Molecular and Cellular Biology Laboratory, Salk Institute for Biological Studies, La Jolla California 92037 USA (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA. (1)
Sorbonne Université, INSERM, CNRS, Institut de la Vision, 17 rue Moreau, F-75012 Paris, France (1)
Department of Pharmacy, University of Copenhagen (1)
School of Life Science and Technology, China Pharmaceutical University (1)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), IPHC, UMR 7178, Université de Strasbourg, CNRS, 67087 Strasbourg, France; Infrastructure Nationale de Protéomique ProFI − FR2048 CNRS, 67087 Strasbourg, France (1)

IsPrivate

False (1)

Classification

bacteria (8)
protozoa (3)
helminths (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
2x(15)N labeled L-lysine (1)
Not available (1)
4x(15)N labeled L-arginine (1)

Study type

ChIP-seq (436)
Transcription profiling by array (419)
ChIP-chip by tiling array (199)
RNA-seq of coding RNA (153)
Proteomic profiling by array (81)
ChIP-chip by array (62)
Other (39)
RNA-seq of coding RNA from single cells (38)
Methylation profiling by high throughput sequencing (31)
Methylation profiling by array (30)
RIP-seq (20)
CUT&RUN (17)
Comparative genomic hybridization by array (16)
RNA-seq of non coding RNA (15)
Antigen profiling (9)
ATAC-seq (9)
MeDIP-seq (5)
RNA-seq of total RNA (5)
Animal - Single-cell sequencing (4)
Human - High-throughput sequencing (4)
Animal - High-throughput sequencing (4)
Cell line - High-throughput sequencing (4)
Transcription profiling by tiling array (4)
DNA-seq (4)
Unknown experiment type (3)
Human - One-color microarray (3)
Transcription profiling by RT-PCR (3)
Transcription profiling by SAGE (2)
CLIP-seq (2)
Single nucleus RNA sequencing (2)

Release Date

2022 (1557)
2021 (1306)
2023 (1129)
2020 (820)
2024 (814)
2025 (778)
2019 (506)
2015 (470)
2013 (453)
2018 (452)
2014 (447)
2016 (428)
2017 (417)
2012 (338)
2010 (267)
2011 (251)
2009 (105)
2026 (95)
2008 (84)
2007 (52)
2006 (29)
2005 (29)
2004 (18)
2003 (12)
2001 (12)
2000 (11)
2002 (9)
1998 (8)
1999 (4)
1997 (1)

Location

China (1)

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Antibacterial Monoclonal Antibodies Do Not Disrupt the Intestinal Microbiome or Its Function

Antibiotics revolutionized medicine, however, it is now clear that broad-spectrum antibiotics alter the composition and function of the host’s microbiome. The microbiome plays a key role in human health and its perturbation is increasingly recognized as contributing to many human diseases. Wide spre...

2021-01-11 | MTBLS1257 | MetaboLights

Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation IgG 1:50]

Purpose: There is evidence that therapeutic cancer vaccines can lengthen survival for some cancer patients, but responses vary widely from one person to another. Methods to predict clinical outcomes will advance the field and provide new insights into critical determinants of in vivo efficacy. Thi...

ORGANISM(S): Homo sapiens

2013-04-01 | E-GEOD-42163 | biostudies-arrayexpress

Baseline serum anti-glycan antibodies of 28 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Training IgG 1:50]

ORGANISM(S): Homo sapiens

2013-04-01 | E-GEOD-42019 | biostudies-arrayexpress

Longitudinal clonal IgG cross-reactivity profiles of coronavirus-specific B-cells in COVID-19 patients

We investigated the kinetics, breadth, magnitude, and level of cross-reactivity of IgG antibodies against SARS-CoV-2 and heterologous seasonal (HCoV-NL63, -229E, -OC43 and -HKU1) and epidemic coronaviruses (SARS-CoV, hCoV-MERS) at the clonal level in patients with mild or severe COVID-19 as well as ...

ORGANISM(S): Homo sapiens

2022-09-30 | E-MTAB-12161 | biostudies-arrayexpress

Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation Total Ig 1:50]

ORGANISM(S): Homo sapiens

2013-04-01 | E-GEOD-42176 | biostudies-arrayexpress

Baseline serum anti-glycan antibodies of 113 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Validation Total Ig 1:200]

ORGANISM(S): Homo sapiens

2013-04-01 | E-GEOD-42179 | biostudies-arrayexpress

Baseline serum anti-glycan antibodies of 28 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Training Total Ig 1:50]

ORGANISM(S): Homo sapiens

2013-04-01 | E-GEOD-42145 | biostudies-arrayexpress

Baseline serum anti-glycan antibodies of 28 subjects in a clinical trial of PROSTVAC-VF, a therapeutic cancer vaccine [Training Total Ig 1:200]