Immunology - OmicsDI

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Unknown (182282)
Genomics (8543)
Proteomics (1142)
Transcriptomics (358)
Models (49)
Metabolomics (37)
Other (26)
Genomic (16)
Clinical (2)
Methylation profiling (1)

Organisms

Homo sapiens (246)
Mus musculus (195)
Canis lupus familiaris (10)
Macaca mulatta (6)
Rattus norvegicus (5)
Oncorhynchus mykiss (5)
Oryctolagus cuniculus (4)
Danio rerio (4)
Plasmodium falciparum (3)
Gallus gallus (3)
synthetic construct (3)
Helicobacter pylori (2)
Bacteria (2)
Clostridioides difficile (2)
Oreochromis niloticus (2)
Schistosoma japonicum (2)
Mus musculus domesticus (2)
Influenza A virus (1)
Bordetella pertussis (1)
Escherichia coli (1)
cellular organisms (1)
Mammalia (1)
gut metagenome (1)
human oral metagenome (1)
Anopheles gambiae (1)
Aspergillus fumigatus Af293 (1)
Mycobacterium tuberculosis (1)
Aedes aegypti (1)
Salmo salar (1)
Bos taurus (1)

Organisms

Mus musculus (3839)
Homo sapiens (2397)
Macaca mulatta (55)
Rattus norvegicus (41)
Danio rerio (33)
Mycobacterium tuberculosis (32)
Corynebacterium pseudotuberculosis (25)
Drosophila melanogaster (25)
Candida albicans (25)
Staphylococcus aureus (25)
Gallus gallus (23)
Escherichia coli (21)
Pseudomonas aeruginosa (20)
Canis lupus familiaris (19)
Streptococcus pyogenes (19)
Saccharomyces cerevisiae (16)
Macaca fascicularis (14)
Mycobacterium tuberculosis H37Rv (13)
Mus (13)
Caenorhabditis elegans (13)
Plasmodium falciparum (13)
Histoplasma ohiense (12)
Histoplasma capsulatum (12)
Oncorhynchus mykiss (11)
Severe acute respiratory syndrome coronavirus 2 (11)
Sus scrofa (11)
Entamoeba histolytica (10)
mouse gut metagenome (10)
Rhodococcus jostii RHA1 (9)
Aspergillus fumigatus (9)

Repository

ENA (8503)
pride (1036)
geo (245)
biostudies-arrayexpress (173)
MassIVE (52)
BioModels (46)
MetaboLights (36)
iProX (27)
EGA (19)
dbGaP (16)
jPOST (10)
Cell Collective (3)
GPMDB (3)
PanoramaPublic (2)
GNPS (1)

Tissue

Cell culture (199)
T cell (78)
Epithelial cell (62)
Blood (58)
Brain (47)
B cell (35)
Blood serum (35)
Macrophage (34)
Spleen (34)
Liver (26)
Blood plasma (25)
Bone marrow (23)
Colon (23)
Cell suspension culture (22)
Lung (22)
Permanent cell line cell (21)
Fibroblast (18)
Kidney (18)
Primary cell (17)
Monocyte (16)
Neutrophil (16)
Skin (15)
Hepatocyte (14)
Dendritic cell (13)
Lymph node (12)
Leukocyte (11)
Blood cell (10)
Early embryonic cell (9)
JURKAT cell (9)
Melanocyte (9)

Disease

Disease free (27)
Colon cancer (21)
Breast cancer (11)
Melanoma (11)
COVID-19 (9)
Acute myeloid leukemia (8)
Malignant neoplasm of ovary (8)
Pulmonary tuberculosis (8)
Cervix carcinoma (7)
Rheumatoid arthritis (7)
Alzheimer's disease (6)
Brain cancer (6)
Human immunodeficiency virus infectious disease (6)
Inflammatory bowel disease (6)
Wounds and Injuries (6)
Acute leukemia (5)
Influenza (5)
Tuberculosis (5)
Acute lymphocytic leukemia (4)
Bacterial infectious disease (3)
Not Available (3)
Peptic ulcer disease (1)
Duodenal ulcer (1)
Pertussis (1)
Clostridium difficile colitis (1)
Chicken Anaemia Virus infected (1)
Acute promyelocytic leukemia (1)
Normal (1)
Carcinoma (1)
Colorectal Neoplasms (1)

Technology Type

Mass Spectrometry (1036)
Shotgun proteomics (551)
Bottom-up proteomics (168)
Affinity purification coupled with mass spectrometry proteomics (125)
Data-dependent acquisition (92)
Gel-based experiment (60)
Data-independent acquisition (54)
SWATH MS (33)
Top-down proteomics (33)
Mass spectrometry (30)
HDMSE (18)
SRM/MRM (16)
All-ion fragmentation (13)
MSE (13)
Immunopeptidomics (10)
Chemical cross-linking coupled with mass spectrometry proteomics (8)
DiaPASEF (8)
Mass spectrometry assay (6)
Mass spectrometry imaging (5)
Affinity proteomics (3)
PAcIFIC (2)
ILLUMINA, Illumina HiSeq 2500 (1)
Glycoproteomics (1)
Metaproteomics (1)
Olink affinity proteomics (1)
Proteogenomics (1)
RNA mass spectrometry (1)

Instrument Platform

Orbitrap Fusion Lumos (11)
Illumina NovaSeq 6000 (10)
Q Exactive (9)
Illumina HiSeq 4000 (7)
Orbitrap Eclipse (7)
Illumina MiSeq (6)
NextSeq 500 (4)
LTQ Orbitrap (4)
Q Exactive HF (4)
Instrument (3)
Illumina HiSeq 2500 (2)
Orbitrap Exploris 480 (2)
Orbitrap Fusion (2)
Q Exactive Plus (2)
Scanpy (hash 98de5d1a) (1)
Chromium Next GEM Single Cell 5' Reagent Kits (10x Genomics) (1)
10xGenomics Chromium 3'v3 (1)
CryoStor® CS10 Freezing Medium (Cat. No. 100-1061; StemCell Technologies) (1)
Computer (1)
10X Genomics Chromium (1)
Geniom RT Analyzer (1)
Geniom (1)
IScan (Illumina) (1)
ScanArray 5000 [PerkinElmer] (1)
418 [Affymetrix] (1)
RNeasy Mini Kit (1)
NA (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1500 (1)
Orbitrap Exploris 240 (1)

Publication Date

2025 (229)
2024 (203)
2023 (178)
2022 (163)
2026 (151)
2021 (147)
2020 (121)
2018 (75)
2019 (71)
2016 (48)
2017 (44)
2014 (40)
2015 (37)
2013 (30)
2011 (16)
2010 (16)
2005 (13)
2012 (13)
2009 (12)
2008 (6)
2007 (3)
2006 (1)
2003 (1)

UNIPROT ID/AC

Q64729 (2)
Q9ES17 (2)
P18893 (2)
P07750 (2)
P04351 (2)
P29350 (2)
Q99JB6 (2)
P42227 (2)
P08505 (2)
P29476 (1)
P25106 (1)
Q718F0 (1)
P01574 (1)
P48061 (1)
P52633 (1)
P23772 (1)
Q5PSB0 (1)
O35716 (1)
P42225 (1)
P42228 (1)
Q62406 (1)
Q61727 (1)
Q61190 (1)
Q8K4B4 (1)
Q9JHX3 (1)
Q61098 (1)
Q60837 (1)
P15261 (1)
P16382 (1)
P01590 (1)

CHEBI ID

CHEBI:17368 (10)
CHEBI:28044 (8)
CHEBI:16919 (8)
CHEBI:17750 (7)
CHEBI:29016 (7)
CHEBI:16704 (7)
CHEBI:16737 (7)
CHEBI:30769 (7)
CHEBI:17562 (6)
CHEBI:25017 (6)
CHEBI:16335 (6)
CHEBI:7916 (6)
CHEBI:15354 (6)
CHEBI:17351 (6)
CHEBI:72998 (5)
CHEBI:18237 (5)
CHEBI:17126 (5)
CHEBI:16349 (4)
CHEBI:73623 (1)
CHEBI:59132 (1)
CHEBI:17632 (1)
CHEBI:17089 (1)
CHEBI:16480 (1)
CHEBI:29034 (1)
CHEBI:29033 (1)
CHEBI:17627 (1)
CHEBI:15379 (1)
CHEBI:18009 (1)
CHEBI:16474 (1)
CHEBI:33699 (1)

Metabolite Name

Cytidine (6)
Xanthine (6)
Creatine (6)
Linoleic acid (5)
Creatinine (5)
L-Methionine (5)
Hypoxanthine (5)
Betaine (4)
L-Arginine (4)
L-Threonine (4)
Palmitoleic acid (4)
L-Histidine (4)
Choline (4)
Taurine (4)
Guanine (4)
Adenine (4)
4-acetamidobutanoate (4)
Uridine (4)
L-Phenylalanine (4)
N6,N6,N6-Trimethyl-L-lysine (3)
L-Norleucine (3)
Leucine (3)
Hypoxanthine (3)
Arginine (3)
Choline (3)
Adenosine (3)
Uracil (3)
Thiamine (3)
L-Lysine (3)
Pantothenate (3)

First Public Date

2014 (1144)
2024 (891)
2025 (823)
2023 (820)
2021 (736)
2022 (725)
2026 (673)
2020 (642)
2019 (581)
2018 (416)
2017 (353)
2015 (324)
2016 (219)
2013 (154)
2012 (2)

Modelling Approach

Ordinary differential equation model (36)
Constraint-based model (2)

Study status

Not provided (1)
Completed (1)

Lab affiliation

Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (29)
Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4 (24)
Department of Microbiology and Immunology, The University of Melbourne, Victoria, Australia (19)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (11)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for infection and immunity, Melbourne, 3000, Australia (10)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (6)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (5)
Department of Microbiology and Immunology, University of Melbourne, Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia (5)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, UK (5)
Department of Immunology, Interfaculty Institute for Cell Biology, Tübingen, Germany (4)
Department of Microbiology and Immunology at the Peter Doherty Institute of infection and immunity, University of Melbourne, Melbourne, Victoria, Australia (4)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, 792 Elizabeth St, Melbourne 3000, Australia (4)
Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, Germany (4)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, United Kingdom (4)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, UK (4)
Immunology Research Center, National Health Research Institutes, Zhunan, Taiwan Department of Pathology & Immunology, Baylor College of Medicine, Houston, Texas (4)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (4)
Ottawa Institute of Systems Biology and Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada (4)
Professor, Microbiology, Immunology, and Pathology Mycobacteria Research Laboratories Scientific Director, Rocky Mountain Regional Biocontainment Laboratory Editor-in-chief, BMC Mycobacteria (4)
Proteome Center Rostock Department for Proteome Research Institute of Immunology Medical Faculty and Natural Science Faculty University of Rostock Schillingallee 69 18057 Rostock Germany (4)
University of Tübingen Interfaculty Institute for Cell Biology Department of Immunology Auf der Morgenstelle 15 72076 Tuebingen Germany (4)
Cell Signalling & Immunology, School of Life Sciences, University of Dundee (3)
Cell Signalling and Immunology Division, School of Life Sciences, University of Dundee (3)
Clinical Collaboration Unit Translational Immunology, German Cancer Consortium (DKTK), Department of Internal Medicine, University Hospital Tübingen, Tübingen, Germany (3)
Department of Biochemistry and Immunology, Universidade Federal de Minas Gerais (3)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia. (3)
Departments of Chemistry, Biological Sciences, Microbiology and Immunology, Vanderbilt University (3)
Experimental Systems Immunology, Max Planck Institute of Biochemistry, Martinsried, Germany (3)
Head of the Proteomics Core Facility, NAPI project manager, Institute of Immunology Rikshospitalet, Oslo, Norway (3)
Institute for Research in Immunology and Cancer (IRIC) Université de Montréal, Department of Chemistry, Université de Montréal, MIL campus, Montréal, H2V 0B3, Canada (3)