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Indel array-based genotyping of pupariation site preference among Drosophila sechellia backcross progeny

We identified 6,975 insertion/deletion events of between 10 and 100 bp in length from the Drosophila simulans and Drosophila sechellia Mercator/MAVID genomic sequence alignment. Replicate pure samples of Drosophila simulans and Drosophila sechellia gDNA were competitively hybridized to measure the e...

ORGANISM(S): Drosophila sechellia x Drosophila simulans

2013-02-26 | E-GEOD-44443 | biostudies-arrayexpress

HITI and INDEL analysis by next-generation sequencing

PRJNA749804 | ENA

Investigation of INDEL variants in apoptosis: the relevance to gastric cancer

Variants of INDEL in gastric cancer

PRJEB40351 | ENA

Cardiomyocyte ST-wave depression indel characterisation (ATAC-seq)

PRJNA685134 | ENA

On/Off targets INDEL analysis by Next Generation Sequencing

PRJNA746584 | ENA

Indel detection in BRCA1 and BRCA2

Evaluation and Optimisation of Indel Detection Workflows for Ion Torrent Sequencing of the BRCA1 and BRCA2 genes

PRJEB5466 | ENA

Cardiomyocyte ST-wave depression indel characterisation (NuTi Capture-C)

PRJNA685144 | ENA

HITI and INDEL analysis by next-generation sequencing

SpCas9 INDEL frequency and HITI was evaluated at the on-target site of guide RNA targeting either the mouse or pig rhodopsin by next-generation sequencing.

ORGANISM(S): Sus scrofa Mus musculus

2021-11-11 | GSE180875 | GEO

Targeted exome sequencing of 69 human melanoma brain metastases

In-depth information regarding the DFCI OncoPanel sequencing panel has been described previously. Briefly, sequencing is performed using an Illumina HiSeq 2500 system (RRID:SCR_016383) with 2×100 paired-end reads. Samples must meet an average 50X coverage and minimum of 30X coverage for 80% of targe...

ORGANISM(S): Homo sapiens

2024-11-21 | E-MTAB-14575 | biostudies-arrayexpress

Blocking protein quality degradation leads to structural stabilization of DHFR indel variants

PRJNA1289146 | ENA

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