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TranscriptomicsCarbon-Deprivation-Driven Transcriptome Reprogramming in Detached Developmentally-Arresting Arabidopsis Inflorescences
Senescence is genetically-controlled and activated in mature tissues during ageing. However, immature plant tissues also display senescence-like symptoms when continuously exposed to adverse energy-depleting conditions. We used detached dark-held immature inflorescences of Arabidopsis thaliana to un...
ORGANISM(S): Arabidopsis thaliana 
2012-09-25 | E-GEOD-41099 | biostudies-arrayexpress
TranscriptomicsGenome-wide profiling of small RNAs in rice under abiotic stresses
To identify novel miRNA and NAT-siRNAs that are associated with abiotic stresses in rice, we generated small RNA sequences from inflorescences from rice under control and under dought, salt, and cold stress treatments. Over 30 million reads were generated. sequencing of small RNAs in rice under cont...
ORGANISM(S): Oryza sativa 
2012-03-12 | E-GEOD-26357 | biostudies-arrayexpress
GenomicsTranscriptome analyses of grapevine inflorescences
Comparative transcriptome analyses of grapevine inflorescences of three different developmental stages.
PRJEB30338 | ENA
TranscriptomicsExpression Profiling of Arabidopsis Long Intergenic Nongcoding RNA in Inflorescences, Leaves, and Roots
Long intergenic noncoding RNAs (lincRNA) transcribed from intergenic regions of eukaryotic genomes play important roles in key biological processes; yet, plant lincRNAs remain poorly characterized. Here we profiled lincRNA expression in inflorescences, leaves and roots using ATH lincRNA v1 array. we...
ORGANISM(S): Arabidopsis thaliana 
2011-08-05 | E-GEOD-30394 | biostudies-arrayexpress
GenomicsChIP-Seq of Arabidopsis wildtype inflorescences using an antibody raised against a C-terminal peptide of SEP3
WARNING: This library was yield low amount of material and it was over-amplified by PCR. This libraries are used study the robustness of several statitical methods against PCR artifacts. ChIP experiments were performed on Arabidopsis wildtype inflorescences using an antibody raised against a C-termi...
ORGANISM(S): Arabidopsis thaliana 
2011-04-27 | E-MTAB-587 | biostudies-arrayexpress
TranscriptomicsRNAseq of Arabidopsis thaliana Col-0 inflorescences
Paired-end Illumina RNA sequencing of Arabidopsis thaliana Col-0 inflorescences
ORGANISM(S): Arabidopsis thaliana 
2016-11-14 | GSE74717 | GEO
TranscriptomicsCarbon-Deprivation-Driven Transcriptome Reprogramming in Detached Developmentally-Arresting Arabidopsis Inflorescences
Senescence is genetically-controlled and activated in mature tissues during ageing. However, immature plant tissues also display senescence-like symptoms when continuously exposed to adverse energy-depleting conditions. We used detached dark-held immature inflorescences of Arabidopsis thaliana to un...
ORGANISM(S): Arabidopsis thaliana 
2012-09-25 | GSE41099 | GEO
TranscriptomicsExpression data from Ler and TOP1a-2 inflorescences
DNA topoisomerases release supercoils in DNA introduced during replication or transcription. How DNA topoisomerases impact transcription in the context of eukaryotic chromatin is poorly understood. In this study, using a floral stem cell model in Arabidopsis, we uncovered a role of TOP1a in Polycomb...
ORGANISM(S): Arabidopsis thaliana 
2014-10-14 | E-GEOD-42403 | biostudies-arrayexpress
TranscriptomicsSporisorium reilianum Infection Changes Inflorescence and Branching Architectures of Maize
S. reilianum triggered loss of organ and meristem identity, and loss of meristem determinacy in male and female inflorescences and flowers. Microarray analysis showed that these developmental changes were accompanied with transcriptional regulation of genes proposed to regulate floral organ and meri...
ORGANISM(S): Zea mays 
2011-08-31 | E-GEOD-29747 | biostudies-arrayexpress
TranscriptomicsAth_Agilent_v2_Riechmann array expression profile AP1-GR ap1cal inflorescences - chx experiment
This experiment describes gene expression after the activation of APETALA1-GR, to study and identify AP1 target genes. We used a 35S:AP1-GR ap1 cal line to induce a synchronized response activating the AP1-GR fusion protein in ap1 cal inflorescence-like meristems through dexamethasone or dexamethaso...
ORGANISM(S): Arabidopsis thaliana 
2011-01-01 | E-GEOD-20175 | biostudies-arrayexpress
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