Invertebrates - OmicsDI

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Unknown (4519)
Genomics (723)
Transcriptomics (189)
Proteomics (43)
Metabolomics (25)
Methylation profiling (13)
Other (2)

Organisms

Drosophila melanogaster (35)
Mus musculus (29)
Homo sapiens (24)
Daphnia magna (16)
Caenorhabditis elegans (12)
Folsomia candida (7)
Danio rerio (6)
Enchytraeus albidus (4)
Strongylocentrotus purpuratus (3)
Emiliania huxleyi (3)
Hyalella azteca (2)
Mytilus edulis (2)
Locusta migratoria (2)
Lepeophtheirus salmonis (2)
Aedes aegypti (2)
Gorgonia ventalina (2)
Oikopleura dioica (2)
Schistocerca gregaria (2)
Haliotis asinina (2)
Hydra oligactis (1)
Panagrellus redivivus (1)
Calyptogena magnifica symbiont (1)
Schistosoma japonicum (1)
Sarcophaga crassipalpis (1)
Mytilus galloprovincialis (1)
Nacella concinna (1)
Chymomyza costata (1)
Platichthys flesus (1)
Tribolium castaneum (1)
Dirofilaria immitis (1)

Organisms

Drosophila melanogaster (19)
Mus musculus (14)
Homo sapiens (13)
Caenorhabditis elegans (6)
Mytilus galloprovincialis (5)
soil metagenome (5)
Folsomia candida (4)
Nematostella vectensis (4)
seawater metagenome (4)
Magallana gigas (4)
Adineta vaga (3)
Lestoros inca (3)
Schmidtea mediterranea (3)
Apostichopus japonicus (3)
unidentified (3)
Daphnia magna (3)
freshwater metagenome (3)
gut metagenome (3)
feces metagenome (3)
Danio rerio (3)
Priapulus caudatus (2)
Ascogregarina taiwanensis (2)
Paraescarpia echinospica (2)
Biomphalaria glabrata (2)
coral reef metagenome (2)
Enchytraeus albidus (2)
Azumapecten farreri (2)
Sinotaia aeruginosa (2)
Enchytraeus crypticus (2)
Serratia marcescens (2)

Repository

ENA (691)
geo (128)
biostudies-arrayexpress (107)
pride (34)
MetaboLights (19)
GNPS (6)
iProX (3)
MassIVE (3)
jPOST (2)
NODE (1)
PanoramaPublic (1)

Tissue

Cell culture (5)
Whole body (4)
Gill (3)
Egg (2)
Aag-2 cell (1)
Adductor (1)
Animal cell (1)
Blood (1)
Blood cell (1)
Blood serum (1)
Body proper (1)
Brain (1)
Cell in vitro (1)
Colon (1)
Early embryonic cell (1)
Embryo (1)
Embryonic stem cell (1)
Foot (1)
Head (1)
Heart (1)
Mantle (1)
Multicellular organism (1)
Oocyte (1)
Plant cell (1)
Venom (1)
Venom apparatus (1)

Disease

Disease free (2)
Infected with Drechmeria coniospora (1)
Acute leukemia (1)
Autism spectrum disorder (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (34)
Mass spectrometry (16)
Shotgun proteomics (16)
Bottom-up proteomics (8)
Data-dependent acquisition (6)
Gel-based experiment (6)
Mass spectrometry assay (3)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Top-down proteomics (2)
All-ion fragmentation (1)
Data-independent acquisition (1)
Mass spectrometry imaging (1)

Instrument Platform

Illumina NovaSeq 6000 (7)
Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (7)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel). (4)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB (4)
Illumina HiSeq 4000 (4)
FastPrep‑24 homogenizer (MP Biomedicals) (3)
See manuscript (3)
Q Exactive (3)
Genewiz library construction hardware (2)
Centrifuge, RNeasy Kit (Qiagen) (2)
Illumina HiSeq 2000 (2)
Agilent 6530 Accurate Mass Q-TOF (2)
Illumina NovaSeq 6000 sequencing platform (Illumina) (1)
Scalpel, dry ice (1)
DNBSEQ-G50 (1)
FastPrep‑24 homogenizer (MP Biomedicals), operated at 5 m/s for 10 seconds. (1)
Scalpel, dry ice. (1)
Covaris S220 (1)
ScanArray 4000XL [PerkinElmer] (1)
Illumina MiSeq (1)
6530 Quadrupole Time of Flight MS (Agilent Instrument) (1)
6540 Q-TOF LC/MS|1002789 (1)
Thermo Fisher Scientific (MA, USA) Q Exactive hybrid quadrupole-orbitrap mass spectrometer (1)
Thermo Fisher Scientific Vanquish Horizon Duo ultra-high performance liquid chromatography (UHPLC) system with an Accucore C18 column with 150 mm length, 2.1 mm internal diameter, and 2.6 micron particle size (1)
TripleTOF 6600 (1)
MS Imaging - negative (1)
MS Imaging - positive (1)
Liquid Chromatography MS - negative- reverse phase (1)
Liquid Chromatography MS - positive- reverse phase (1)

Publication Date

2013 (27)
2012 (25)
2026 (23)
2025 (23)
2010 (23)
2022 (20)
2014 (18)
2021 (17)
2024 (17)
2019 (14)
2023 (13)
2008 (12)
2020 (11)
2009 (11)
2018 (11)
2017 (10)
2015 (9)
2007 (7)
2016 (6)
2011 (3)
2006 (1)

CHEBI ID

CHEBI:16027 (6)
CHEBI:17596 (6)
CHEBI:17202 (5)
CHEBI:25017 (5)
CHEBI:16704 (5)
CHEBI:17750 (5)
CHEBI:6650 (5)
CHEBI:17509 (5)
CHEBI:17568 (5)
CHEBI:15741 (5)
CHEBI:16750 (5)
CHEBI:17562 (5)
CHEBI:15940 (5)
CHEBI:30769 (5)
CHEBI:17126 (4)
CHEBI:16708 (4)
CHEBI:16870 (4)
CHEBI:17786 (4)
CHEBI:35581 (4)
CHEBI:30851 (4)
CHEBI:15891 (4)
CHEBI:17821 (4)
CHEBI:28867 (4)
CHEBI:17361 (4)
CHEBI:73024 (4)
CHEBI:16010 (4)
CHEBI:16695 (4)
CHEBI:41865 (4)
CHEBI:17015 (4)
CHEBI:7916 (4)

Metabolite Name

Hexadecanedioic acid (5)
(9R,10S,12Z)-9,10-Dihydroxy-8-oxo-12-octadecenoic acid (4)
4-Nitrophenol (4)
1,11-Undecanedicarboxylic acid (4)
Taurine (4)
Undecanedioic acid (4)
Tetradecanedioic acid (4)
Embelin (4)
Dodecanedioic Acid (4)
Inosine (4)
Uridine 2'-phosphate (3)
9,10-Epoxystearic acid (3)
9,10-Dihydroxystearic acid (3)
4-Chloro-L-phenylalanine (3)
8-Amino-7-oxononanoic acid (3)
6,10,14-Trimethyl-2-methylenepentadecanal (3)
Artemether (3)
9-Oxo-nonanoic acid (3)
4-Dodecylbenzenesulfonic acid (3)
2-Naphthalenesulfonic acid (3)
4-Hydroxycyclohexylcarboxylic acid (3)
Dinoterb (3)
Dinaciclib (3)
Practolol (3)
Cucurbitacin A (3)
Anisole (3)
15(S)-Hydroxyeicosatrienoic acid (3)
Inosinic acid (3)
N-[(4E,8E)-1,3-dihydroxyoctadeca-4,8-dien-2-yl]hexadecanamide (3)
3-Methylsuberic acid (3)

First Public Date

2025 (110)
2026 (87)
2024 (71)
2022 (65)
2023 (49)
2019 (48)
2021 (47)
2020 (47)
2014 (43)
2018 (36)
2013 (35)
2017 (25)
2015 (18)
2016 (8)
2012 (1)
2011 (1)

Classification

bacteria (3)
protozoa (2)
helminths (1)
viruses (1)

Study type

Transcription profiling by array (56)
RNA-seq of coding RNA (18)
RNA-seq of non coding RNA (8)
ChIP-seq (4)
Comparative genomic hybridization by array (3)
Other (3)
Unknown experiment type (2)
Animal - High-throughput sequencing (2)
DNA-seq (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (437)
2021 (399)
2020 (360)
2023 (355)
2019 (334)
2024 (317)
2025 (308)
2018 (282)
2016 (251)
2017 (238)
2015 (229)
2014 (193)
2013 (167)
2012 (157)
2011 (111)
2010 (109)
2008 (75)
2009 (67)
2007 (54)
2026 (53)
2006 (30)
2005 (23)
2004 (15)
2001 (14)
2002 (10)
2000 (9)
2003 (8)
1998 (8)
1999 (7)
1997 (3)

Lab affiliation

B CUBE, Technical University, Dresden, Germany (1)
CR Université Grenoble Alpes, Institute for Advanced Biosciences, INSERM U1209, CNRS UMR5309, La Tronche, France. Plateforme BioPark d'Archamps, ArchParc, Saint Julien en Genevois, France (1)
Center for Reproductive Evolution, Biology Department, Syracuse University, Syracuse, NY, 13244, USA (1)
Centre for Bioinnovation, University of the Sunshine Coast, Maroochydore, Queensland 4558, Australia. (1)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (1)
Department of Biological Sciences, University of Alberta (1)
Department of Biomolecular Chemistry, School of Medicine and Public Health, University of Wisconsin, Madison, WI 53715, USA (1)
Department of Biotechnology, TU Delft, The Netherlands (1)
Department of Chemistry, University of North Carolina at Chapel Hill (1)
Department of Clinical and Experimental Medicine, Cell biology, Faculty of Health Science Linköping University, SE-581 83 Linköping, Sweden (1)
Department of Medicine, University of California San Diego, La Jolla, California 92093 (1)
Department of Molecular Biology, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen, The Netherlands (1)
Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia (1)
Department of Molecular and Cellular Biology, University of Guelph, Canada. (1)
Director UAB Proteomics Facility, Professor UAB Anesthesiology (1)
Faculty of Biology, Technion-Israel Institute of Technology, Haifa, Israel (1)
Institut for Experimentelle Medizin (IEM) Arbeitsgruppe Systematische Proteomforschung Christian-Albrechts-Universitat zu Kiel 24105 Kiel, Germany (1)
Institut für Experimentelle Medizin (IEM) Arbeitsgruppe Systematische Proteomforschung Christian-Albrechts-Universität zu Kiel Kiel, Germany (1)
Institute for Molecular Bioscience, The University of Queensland, St Lucia, Queensland 4072, Australia (1)
Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, Switzerland (1)
Institute of Oceanology, Chinese Academy of Sciences (1)
Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China (1)
Laboratory of Toxinology, FIOCRUZ, Brazil (1)
Metazoa Phylogenomics & Genome Evolution Lab, Institute of Evolutionary Biology (CSIC-UPF) (1)
Molecular and Cellular Biology Department, University of Guelph, Ontario, Canada (1)
School of Pharmacy and Department of Chemistry, University of WI-Madison, Madison, WI, United States (1)
Systems Arbovirology, Leibniz Institute of Virology (LIV), Hamburg, Germany (1)
The Francis Crick Institute (1)
Tomanek Lab Biological Sciences California Polytechnic State University San Luis Obipso (1)
University of Maryland Baltimore County Department of Biological Sciences Baltimore, MD (1)

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Marine invertebrates

Gulf of Alaska Midwater Invertebrates

PRJNA1327424 | ENA

Invertebrates in rivers

Invertebrates in rivers Raw sequence reads

PRJNA398157 | ENA

Gene expression microarray analysis of heat stress in the soil invertebrate Folsomia candida

Temperature is an important ecological condition, and sudden temperature changes in soil can induce stress in soil-dwelling invertebrates. Soil animals can move to more favorable habitats and/or adapt physiologically to a stressful environment. Hyperthermic conditions will impact gene expression as ...

ORGANISM(S): Folsomia candida

2010-06-24 | E-GEOD-17024 | biostudies-arrayexpress

Viral genomes in some Invertebrates

Viral genomes in some Invertebrates Transcriptome

PRJNA627042 | ENA

Deep-sea marine invertebrates

Deep-sea marine invertebrates off Puerto Rico

PRJNA1111085 | ENA

Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates

Here, we demonstrate that Nematostella vectensis, Ciona intestinalis, Apis mellifera, and B. mori, show two distinct populations of genes differentiated by gene-body CpG density. Genome-scale DNA methylation profiles for A. mellifera spermatozoa reveal CpG-poor genes are methylated in the germ line,...

ORGANISM(S): Apis mellifera

2011-06-16 | E-GEOD-29982 | biostudies-arrayexpress

Invertebrates

invertebrates of Cape Verde barcoding

PRJNA973953 | ENA

Invertebrates

Invertebrates virome Raw sequence reads

PRJNA838788 | ENA

Associated microbiota of water invertebrates and environmental compartments in Teletskoye Lake (Altai Republic, Russia)

Invertebrates and environment metagenome

PRJNA526436 | ENA

Aquatic invertebrates