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TranscriptomicsSalinity stress inducible genes in rice
44K oligo microarray analysis was performed for monitoring salinity stressM-bM-^@M-^Sinducible genes in rice. Two-condition, 0 h or 1 h treatment of 150mM NaCl in shoot or in root. Two dye swapped experiments were performed.
ORGANISM(S): Oryza sativa 
2011-03-10 | E-GEOD-20746 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium
A huge number of microorganisms are colonized in human gut and the balance of their composition is closely related to human health. Recently, many probiotics such as bifidobacteria or lactobacilli have been introduced in our life as effective agents. However, we have not well understood their benefi...
ORGANISM(S): Mus musculus 
2011-01-27 | E-GEOD-12997 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium after O157 infection
A huge number of microorganisms are colonized in human gut and the balance of their composition is closely related to human health. Recently, many probiotics such as bifidobacteria or lactobacilli have been introduced in our life as effective agents. However, we have not well understood their benefi...
ORGANISM(S): Mus musculus 
2011-01-27 | E-GEOD-12998 | biostudies-arrayexpress
TranscriptomicsNOTCH3 knockdown in non-transformed human esophageal cells
To determine the role of NOTCH3 in human esophageal epitheila homeostasis/squamous cell differentiation Zinc finger E-box binding (ZEB) proteins ZEB1 and ZEB2 are transcription factors essential in transforming growth factor (TGF)-β-mediated epithelial to mesenchymal transition (EMT), senescence an...
ORGANISM(S): Homo sapiens 
2011-12-01 | E-GEOD-27424 | biostudies-arrayexpress
ProteomicsCarietinum - Root, calculated iBAQ (Rehmanetal,jproteomics2018)
abundance based on calculated iBAQ, Interaction consistency score: 2.7, Coverage: 2
ORGANISM(S): 3827 
2018-00-00 | 1343465408 | PAXDB
ProteomicsMitochondrial proteome of ES1 KO mouse brain
Mitochondrial fraction was obtained using the mitochondrial isolation kit (KC010100, BioChain Institute). Each tissue was finely chopped and homogenized 40 strokes in two volumes of mitochondrial isolation buffer, and then centrifuged at 600×g for 10 min. The supernatant was collected and centrifuge...
ORGANISM(S): Mus Musculus (mouse) 
2022-05-12 | PXD025954 | JPOST Repository
ProteomicsMitochondrial proteome of ES1 KO mouse liver
Mitochondrial fraction was obtained using the mitochondrial isolation kit (KC010100, BioChain Institute). Each tissue was finely chopped and homogenized 40 strokes in two volumes of mitochondrial isolation buffer, and then centrifuged at 600×g for 10 min. The supernatant was collected and centrifuge...
ORGANISM(S): Mus Musculus (mouse) 
2022-05-12 | PXD025963 | JPOST Repository
ProteomicsChronological proteomic analysis of skeletal muscle of limb-girdle muscular dystrophy R1 model mouse
Comparative analysis of soluble proteomes in skeletal muscle from calpain-3 knock-out mouse or proteolytically inactive calpain-3 knock-in mouse to that of wild type mouse.
ORGANISM(S): Mus Musculus (mouse) 
2025-07-14 | PXD036420 | JPOST Repository
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