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TranscriptomicsCell-type, developmental stage, and whole root responses to low pH and sulfur deficiency
This SuperSeries is composed of the following subset Series: GSE30091: Expression analysis of the effect of protoplasting and sorting in roots exposed to low pH GSE30095: Expression analysis of root cell types after treatment with low pH GSE30096: Expression analysis of developmental stages of Arabi...
ORGANISM(S): Arabidopsis thaliana 
2011-11-23 | E-GEOD-30166 | biostudies-arrayexpress
TranscriptomicsExpression analysis of root cell types after treatment with sulfur deficient media
Cell-type specific transcriptional profiles were generated by FACS (Fluorescence Activated Cell Sorting) sorting of roots that express cell-type specific GFP-reporters. Five different GFP-reporter lines were used. FACS cell populations were isolated from roots grown under sulfur deficient conditions...
ORGANISM(S): Arabidopsis thaliana 
2011-11-23 | E-GEOD-30099 | biostudies-arrayexpress
TranscriptomicsExpression analysis of developmental stages of Arabidopsis roots exposed to sulfur deficient media
To understand the effect of sulfur deficiency on developmental stages in the root, we dissected the root into four developmental zones after exposure to sulfur deficiency and expression profiled each zone. Stress responses in plants are tightly coordinated with developmental processes, but the inter...
ORGANISM(S): Arabidopsis thaliana 
2011-11-23 | E-GEOD-30100 | biostudies-arrayexpress
TranscriptomicsExpression analysis time-course of Arabidopsis roots to sulfur deficiency
We preformed at time-course of the expression of whole Arabidopsis roots for 3H, 12H, 24H, 48H and 72H after transfer to media lacking sulfur. We combined these data with 13 other datasests and performed a meta-analysis to ask whether a universal stress response exists in Arabidopsis roots. Stress r...
ORGANISM(S): Arabidopsis thaliana 
2011-11-23 | E-GEOD-30098 | biostudies-arrayexpress
TranscriptomicsGene Expression in whole roots of the Arabidopsis nlp7-1 mutant
The root cap surrounds the root meristem, protecting it from harsh environments and facilitating root movement through soil. In Arabidopsis, new root cap cells produced in the meristem displace older cells toward the root periphery, where they undergo programmed cell death and are released from the ...
ORGANISM(S): Arabidopsis thaliana 
2016-07-31 | E-GEOD-63474 | biostudies-arrayexpress
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