Jacobsen S S - OmicsDI

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Unknown (1230)
Transcriptomics (95)
Proteomics (73)
Genomics (36)
Metabolomics (3)

Organisms

Mus musculus (47)
Arabidopsis thaliana (33)
Homo sapiens (26)
Andropogon gerardi (21)
Bacteria (21)
Botrytis cinerea (21)
Canis lupus familiaris (21)
Clostridium perfringens (21)
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Human betaherpesvirus 5 (21)
Japanese encephalitis virus group (21)
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Mesocricetus auratus (21)
Miscanthus x giganteus (21)
Candida albicans (6)
Saccharomyces cerevisiae (5)
Aspergillus fumigatus (2)
Oryza sativa Japonica Group (2)
Saccharomyces paradoxus (1)
Shewanella oneidensis MR-1 (1)
Ciona intestinalis (1)
Oryza sativa Indica Group (1)
Streptomyces coelicolor (1)
Streptococcus pneumoniae (1)
Drosophila melanogaster (1)
Rattus norvegicus (1)

Organisms

Arabidopsis thaliana (2)
Manihot esculenta (1)

Repository

biostudies-arrayexpress (126)
PeptideAtlas (51)
pride (21)
ENA (4)
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EGA (1)
PanoramaPublic (1)

Tissue

Synovial tissue (3)
Blood plasma (2)
Blood serum (2)
Extracellular vesicle (2)
Articular cartilage (1)
Blood (1)
Bone (1)
Brain (1)
Cell culture (1)
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Disease

Normal (2)
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Adenocaricinoma (1)
Abdominal pain (1)
Candidiasis (1)
Disease free (1)
Neurodegenerative disease (1)
Obesity (1)
Pancreatic cancer (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (21)
Shotgun proteomics (10)
Bottom-up proteomics (6)
SWATH MS (3)
Mass spectrometry (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
DiaPASEF (1)
HDMSE (1)

Instrument Platform

QSTAR XL (30)
ABI QSTAR (11)
TripleTOF 5600 (10)
Illumina HiSeq 2000 (5)
Illumina NovaSeq 6000 (3)
Axon GenePix 4000B scanning hardware (2)
ISQ LT (Thermo) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (73)
2015 (22)
2012 (21)
2013 (16)
2010 (14)
2011 (8)
2016 (6)
2009 (5)
2025 (5)
2020 (4)
2026 (3)
2021 (3)
2019 (3)
2008 (3)
2007 (3)
2006 (3)
2022 (3)
2024 (2)
2023 (2)
2018 (2)
2017 (1)

UNIPROT ID/AC

B5BV13 (51)
P27425 (51)
P35747 (51)
P01959 (50)
Q95M34 (50)
B5BV09 (49)
P60708 (48)
O97973 (47)
O97641 (45)
Q28372 (43)
Q9N1X2 (42)
B7XH73 (41)
P68226 (41)
P83704 (41)
A2Q0Z1 (40)
C6L1J5 (40)
P00559 (39)
P62327 (39)
Q9TUX5 (39)
B8Y403 (38)
P00443 (38)
Q6DTK4 (38)
A8J714 (37)
P02561 (37)
A2Q0Z0 (36)
A2Q0Z2 (36)
B3IVM1 (36)
B2B9I8 (35)
O97677 (35)
Q9GKX8 (35)

ENSEMBL ID

ENSECAG00000004960 (51)
ENSECAG00000009556 (51)
ENSECAG00000014414 (51)
ENSECAG00000021580 (51)
ENSECAG00000001810 (50)
ENSECAG00000004973 (50)
ENSECAG00000011847 (50)
ENSECAG00000019927 (50)
ENSECAG00000021499 (50)
ENSECAP00000007368 (50)
ENSECAP00000013223 (50)
ENSECAG00000006095 (49)
ENSECAG00000009752 (49)
ENSECAG00000014858 (49)
ENSECAP00000003495 (49)
ENSECAG00000000207 (48)
ENSECAG00000010481 (46)
ENSECAP00000007504 (45)
ENSECAG00000000548 (44)
ENSECAG00000012096 (44)
ENSECAG00000004201 (43)
ENSECAG00000024571 (43)
ENSECAG00000016475 (42)
ENSECAG00000019900 (42)
ENSECAG00000015581 (41)
ENSECAG00000000841 (40)
ENSECAG00000003345 (40)
ENSECAG00000014197 (40)
ENSECAG00000021116 (40)
ENSECAG00000021882 (40)

CHEBI ID

CHEBI:155905 (1)
CHEBI:133596 (1)
CHEBI:33946 (1)
CHEBI:18721 (1)
CHEBI:5445 (1)
CHEBI:17327 (1)
CHEBI:10642 (1)
CHEBI:18222 (1)
CHEBI:22470 (1)
CHEBI:33942 (1)
CHEBI:26984 (1)
CHEBI:36751 (1)
CHEBI:36006 (1)
CHEBI:3168 (1)
CHEBI:17822 (1)
CHEBI:26271 (1)
CHEBI:26986 (1)
CHEBI:29864 (1)
CHEBI:28875 (1)
CHEBI:15428 (1)
CHEBI:17754 (1)
CHEBI:30997 (1)
CHEBI:28661 (1)
CHEBI:27266 (1)
CHEBI:18183 (1)
CHEBI:16449 (1)
CHEBI:15843 (1)
CHEBI:36005 (1)
CHEBI:15882 (1)
CHEBI:17306 (1)

Metabolite Name

(ii) Ergosta-4,6,22-triene or Ergosta-5,22-dien-3-ol (acetate) (1)
(ii) Hydrocarbon (1)
(ii)(i) Disaccharide (1)
(i) Maltotriose (Meox 11TMS) (1)
(i) Galactosylglycerol or Glucopyranose (1)
(ii) Octadeca(di)enal (1)
(ii)(i) Hydrocarbon (1)
(i) 6,9,12-Octadecatrienoic acid (Me) or 7,10,13-Hexadecatrienal (1)
(i) Glucopyranose or Galactinol (9TMS) (1)
(ii)(i) 2-C16:0-Glycerol (2TMS) (1)
(i) (Di-)Galactosylglycerol (1)
(ii) Hexitol or Monosaccharide (Meox 6TMS) (1)
(ii) Adenine (N7- 2TMS) (1)
(i) Hexose (TMS) (1)
(i) Tricyclo[8.6.0.0(2,9)]hexadeca-3,15-diene or (i) C22:6 (Me or TMS) (1)
(ii) 7,10-C16:2-enal (1)
(ii) Hexonic acid (1)
(ii) Hexonic acid or Pentonic acid (1)
(ii) Glycerol pattern + m/z 285, 333, 375 (1)
(ii) Threitol (1)
(i) Quinic acid or (ii) Coumaroylquinic acid (1)
(ii) Ribitol or Threitol (1)
(ii) Glycerol (1)
(ii) Phytol (3-Eicosyne/ Skel_Cell_071) (1)
(i) Phytol (3-Eicosyne/ Skel_Cell_071) (1)
(i) 1,6,11-Dodecatriene (1)
(ii) Hexose-derived (1)
(ii)(i) Monosaccharide (1)
(ii) 1,6-Anhydroglucose or (alcyl-)Pentofuranose (1)
(ii)(i) Sugar acid (1)

First Public Date

2023 (1)
2022 (1)
2021 (1)
2018 (1)

Modification

-17.026549 (1)
-18.010565 (1)
15.994915 (1)
42.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (45)
RNA-seq of coding RNA (23)
Methylation profiling by high throughput sequencing (18)
ChIP-seq (13)
ChIP-chip by tiling array (6)
ChIP-chip by array (6)
Other (4)
Methylation profiling by array (4)
RNA-seq of non coding RNA (2)
Differential (1)
Animal - High-throughput sequencing (1)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (138)
2025 (119)
2022 (118)
2024 (106)
2021 (97)
2015 (82)
2018 (81)
2019 (79)
2020 (78)
2017 (71)
2014 (70)
2016 (64)
2012 (62)
2013 (46)
2010 (36)
2011 (35)
2026 (23)
2009 (15)
2008 (9)
2007 (7)
2006 (6)
2005 (5)
2000 (4)
1998 (2)
2004 (1)
2003 (1)
1999 (1)

Lab affiliation

Novo Nordisk Foundation Center for Biosustainability (2)
CDSS Bioanalytical Facility, Dept Pharmacology and Therapeutics, Institute of Systems, Molecular and Integrative Biology, University of Liverpool (1)
CDSS Bioanalytical Facility, LIV-SRF, Dept. Pharmacology & Therapeutics, Institute for Systems, Molecular and Integrative Biology, University of Liverpool (1)
Department of Chemistry and Bioscience Aalborg University Denmark (1)
Department of Medicine, Division of Endocrinology, University of Arizona College of Medicine (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Jena, Germany (1)
Department of Molecular, Cellular and Developmental Biology, University of California, Los Angeles (UCLA), Los Angeles, CA 90095, USA (1)
Department of Veterinary Clinical Sciences, University of Copenhagen (1)
Dept of Molecular Biology and Genetics, Aarhus University,8000- Aarhus, Denmark (1)
Key Laboratory of Systems Biology, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences Department of Life Sciences, ShanghaiTech University (1)
Klinik für Pneumologie und Infektiologie Medizinische Hochschule Hannover (MHH) OE 6870, Carl-Neuberg-Str. 1, 30625 Hannover, Deutschland (1)
Leibniz Institute for Natural Product Research and Infection Biology, Department of Molecular and Applied Microbiology, Stress- and Immunoproteomics group (1)
Medical Research Council Laboratory of Molecular Biology Francis Crick Avenue Cambridge Biomedical Campus Cambridge CB2 0QH (1)
N/A (1)
Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen (1)
Proteomics unit (PROBE), The Department of Biomedicine, University of Bergen, Norway (1)
State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China (1)
Stress- and Immunoproteomics group Department of Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knoell Institute Adolf-Reichwein-Str. 23, 07745 Jena, Germany (1)
Ubiquitin Signalling Division, WEHI (1)
VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (1)

Tags

xref:PubMed:38814684 (1)
xref:PubMed:29339507 (1)
xref:PubMed:34083448 (1)
xref:PubMed:36604425 (1)

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The 11q Terminal Deletion Disorder Jacobsen Syndrome is a Syndromic Primary Immunodeficiency.

Not available

S-EPMC4659842 | biostudies-literature

Rhodamine B oxidation promoted by P450-bioinspired Jacobsen catalysts/cellulose systems.

Not available

S-EPMC9042282 | biostudies-literature

Mating response of three yeast species (S. cerevisiae, S. paradoxus and S. mikatae)

We examined the mating response of three yeast species, by subjecting a-type cells from each of them to alpha-factor (6uM). The expression of cells before and after (60min) addition of alpha-factor were compared using S. cerevisiae cDNA microarrays. In addition, we verified our results with a true m...

ORGANISM(S): Saccharomyces paradoxus

2010-06-11 | E-GEOD-7525 | biostudies-arrayexpress

First Report of Jacobsen Syndrome with Dextrocardia Diagnosed with del(11)(q24q25).

Not available

S-EPMC9149402 | biostudies-literature

Quaternary stereocentres via an enantioconvergent catalytic S_N1 reaction.

Not available

S-EPMC6009832 | biostudies-literature

Catalysis of an S_N2 pathway by geometric preorganization.

Not available

S-EPMC11834864 | biostudies-literature

The SET-domain protein SUVR5 mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation independent manner [ChIP-chip]

In eukaryotic cells, environmental and developmental signals alter chromatin structure and modulate gene expression. Heterochromatin constitutes the transcriptionally inactive state of the genome and in plants and mammals is generally characterized by DNA methylation and histone modifications such a...

ORGANISM(S): Arabidopsis thaliana

2014-06-06 | E-GEOD-58030 | biostudies-arrayexpress

Case report: ETS1 gene deletion associated with a low number of recent thymic emigrants in three patients with Jacobsen syndrome.

Not available

S-EPMC9634179 | biostudies-literature

Effects of semaglutide on beta cell function and glycaemic control in participants with type 2 diabetes: a randomised, double-blind, placebo-controlled trial.

Not available

S-EPMC5491562 | biostudies-literature

Outdoor walking: Mobile EEG dataset from walking during oddball task and walking synchronization task.

Not available

S-EPMC9852920 | biostudies-literature