James Eric E - OmicsDI

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Genomics (58)
Unknown (37)
Transcriptomics (27)
Proteomics (16)
Metabolomics (2)
Models (1)

Organisms

Homo sapiens (69)
Mus musculus (8)
Rattus norvegicus (3)
Bos taurus (2)
Aspergillus flavus (1)
Treponema denticola (1)
Porphyromonas gingivalis (1)

Repository

EGA (56)
biostudies-arrayexpress (29)
MassIVE (15)
MetaboLights (2)
BioModels (1)
PeptideAtlas (1)

Tissue

Brain (1)

Technology Type

Mass spectrometry (2)
Affymetrix 6.0 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina_2.5M (1)
Illumina HiSeq 2500 (1)
Illumina OmniQuad 2.5 - CNVpartition (1)
Illumina_Infinium_HumanMethylation450, Illumina_HumanHT-12v4 (1)

Instrument Platform

Orbitrap Fusion Lumos (7)
LTQ Orbitrap Elite (4)
Illumina HiSeq 2500 (3)
Q Exactive (3)
Q Exactive Plus (2)
5975C Series GC/MSD (Agilent) (1)
LTQ Orbitrap (1)

Publication Date

2014 (9)
2020 (8)
2010 (5)
2012 (4)
2011 (3)
2008 (3)
2015 (2)
2007 (2)
2018 (1)
2005 (1)
2025 (1)
2023 (1)
2022 (1)
2024 (1)
2019 (1)
2013 (1)

UNIPROT ID/AC

A0A024R8H9 (1)
A0A024RC46 (1)
A0A087WTX5 (1)
A0A087WVW2 (1)
A0A087WVZ5 (1)
A0A087WWA5 (1)
A0A087WWK8 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087X130 (1)
A0A087X1S3 (1)
A0A087X1V9 (1)
A0A0A0MR66 (1)
A0A0A0MS07 (1)
A0A0A0MS51 (1)
A0A0A0MSA7 (1)
A0A0C4DG89 (1)
A0A0C4DGT3 (1)
A0AVT1 (1)
A0FGR8 (1)
A0FGR8-2 (1)
A0FGR8-6 (1)
A0M8Q6 (1)
A0MZ66 (1)
A0PJX4 (1)
A1L0T0 (1)
A1L390 (1)
A2A3K4 (1)
A2BFH1 (1)
A2NUT2 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:14336 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15824 (2)
CHEBI:15940 (2)
CHEBI:16015 (2)
CHEBI:16108 (2)
CHEBI:16199 (2)
CHEBI:16335 (2)
CHEBI:16414 (2)
CHEBI:16708 (2)
CHEBI:16857 (2)
CHEBI:17050 (2)
CHEBI:17115 (2)
CHEBI:17295 (2)
CHEBI:17368 (2)
CHEBI:17561 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17821 (2)
CHEBI:17895 (2)
CHEBI:18012 (2)
CHEBI:18019 (2)
CHEBI:18050 (2)
CHEBI:20067 (2)
CHEBI:30769 (2)
CHEBI:30915 (2)
CHEBI:32816 (2)
CHEBI:33942 (2)
CHEBI:4170 (2)

Metabolite Name

1,2-dilinoleoyl-GPC (18:2/18:2) (1)
1,2-dioleoyl-GPC (18:1/18:1)* (1)
1,2-dioleoyl-GPE (18:1/18:1) (1)
1,2-dioleoyl-GPG (18:1/18:1) (1)
1,2-dioleoyl-GPI (18:1/18:1) (1)
1,2-dioleoyl-GPS (18:1/18:1) (1)
1,2-dipalmitoyl-GPC (16:0/16:0) (1)
1,2-distearoyl-GPC (18:0/18:0) (1)
1-(1-enyl-oleoyl)-2-oleoyl-GPE (P-18:1/18:1)* (1)
1-(1-enyl-oleoyl)-GPE (P-18:1)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-oleoyl-GPC (P-16:0/18:1)* (1)
1-(1-enyl-palmitoyl)-2-oleoyl-GPE (P-16:0/18:1)* (1)
1-(1-enyl-palmitoyl)-2-palmitoleoyl-GPC (P-16:0/16:1)* (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0)* (1)
1-(1-enyl-palmitoyl)-GPC (P-16:0)* (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (1)
1-(1-enyl-stearoyl)-2-arachidonoyl-GPE (P-18:0/20:4)* (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2)* (1)
1-(1-enyl-stearoyl)-2-oleoyl-GPE (P-18:0/18:1) (1)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (1)
1-arachidonoyl-GPE (20:4n6)* (1)
1-arachidonoyl-GPI (20:4)* (1)
1-arachidonylglycerol (20:4) (1)
1-lignoceroyl-GPC (24:0) (1)
1-linoleoyl-GPE (18:2)* (1)
1-linoleoyl-GPI (18:2)* (1)
1-margaroylglycerol (17:0) (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (19)
RNA-seq of coding RNA (4)
Unknown experiment type (2)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2014 (12)
2012 (6)
2010 (5)
2025 (5)
2021 (5)
2026 (4)
2018 (4)
2015 (4)
2016 (4)
2011 (3)
2008 (3)
2017 (3)
2007 (2)
2020 (2)
2005 (1)
2023 (1)
2022 (1)
2024 (1)

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Leadership Training and Undergraduate Medical Education: a Scoping Review.

Not available

S-EPMC8131083 | biostudies-literature

BRAF mutation and CDKN2A deletion define a clinically distinct subgroup of childhood secondary high-grade glioma.

Not available

S-EPMC4356711 | biostudies-literature

COVID-19 severity and mortality in patients with chronic lymphocytic leukemia: a joint study by ERIC, the European Research Initiative on CLL, and CLL Campus.

Not available

S-EPMC7347048 | biostudies-literature

Volpatti_Myopathy_P124_Lumos_VS8

This dataset consists of 9 raw MS files, acquired on Orbitrap Fusion Lumos Tribrid mass spectrometer operated in Data Dependent Acquisition mode. Cells and lysates were generated by Jonathan Volpatti. Sample processing and mass spectrometry acquisition was performed by Cassandra Wong. Data analysis...

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2022-07-12 | MSV000089872 | MassIVE

Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptive and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics fo...

2024-02-23 | MTBLS187 | MetaboLights

Clinical Activity of the γ-Secretase Inhibitor PF-03084014 in Adults With Desmoid Tumors (Aggressive Fibromatosis).

Not available

S-EPMC5455706 | biostudies-literature

Everolimus for the Treatment of Advanced Pancreatic Neuroendocrine Tumors: Overall Survival and Circulating Biomarkers From the Randomized, Phase III RADIANT-3 Study.

Not available

S-EPMC5791842 | biostudies-literature

Detection of clinically relevant variants in the <i>TP53</i> gene below 10% allelic frequency: A multicenter study by ERIC, the European Research Initiative on CLL.

Not available

S-EPMC11746920 | biostudies-literature

Institutional clinical trial accrual volume and survival of patients with head and neck cancer.

Not available