Jansen D D - OmicsDI

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Unknown (1558)
Transcriptomics (78)
Genomics (48)
Proteomics (44)
Metabolomics (29)
Models (1)

Organisms

Homo sapiens (116)
Mus musculus (20)
Saccharomyces cerevisiae (13)
Gallus gallus (3)
Arabidopsis thaliana (3)
Rattus norvegicus (2)
Scenedesmus vacuolatus (1)
Daphnia magna (1)
Streptomyces coelicolor (1)
Solanum tuberosum (1)
Caenorhabditis elegans (1)
Plasmodium falciparum (1)
Danio rerio (1)
Aedes aegypti (1)
Mesotaenium sp. JH0031 (1)

Repository

biostudies-arrayexpress (85)
EGA (41)
pride (38)
MetaboLights (29)
MassIVE (5)
BioModels (1)
ENA (1)

Tissue

Cell culture (12)
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Disease

Angelman syndrome (2)
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Disease free (2)
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Dengue disease (1)
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Technology Type

Mass Spectrometry (38)
Mass spectrometry (28)
Shotgun proteomics (21)
Affinity purification coupled with mass spectrometry proteomics (9)
Bottom-up proteomics (5)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Data-dependent acquisition (4)
Data-independent acquisition (4)
Immunopeptidomics (2)
AB SOLiD 4 System (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (7)
Illumina HiSeq 2500 (5)
Liquid Chromatography MS - alternating - hilic (5)
Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina NovaSeq 6000 (3)
Q Exactive (3)
Liquid Chromatography MS - positive - hilic (3)
NextSeq 500 (2)
LTQ Orbitrap Discovery (Thermo Scientific) (2)
Matrix-assisted laser desorption-ionisation imaging MS - (2)
Illumina Genome Analyzer II (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 4000 (1)
Xevo G2-S Tof (1)
Xevo G2-XS QTof (1)
Exactive (Thermo Scientific) (1)
Flow injection analysis MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Orbitrap Fusion (Thermo Fisher Scientific) (1)
Orbitrap Fusion (Thermo Fisher Scientific)_negative (1)
PTR-MS Quad (Radboud) (1)

Publication Date

2022 (17)
2008 (14)
2012 (13)
2020 (12)
2013 (11)
2011 (11)
2010 (11)
2024 (8)
2021 (8)
2026 (8)
2023 (7)
2025 (7)
2019 (6)
2016 (5)
2009 (5)
2014 (4)
2017 (4)
2015 (3)
2007 (2)
2002 (1)
2018 (1)

CHEBI ID

CHEBI:16027 (10)
CHEBI:16235 (10)
CHEBI:15428 (9)
CHEBI:15741 (9)
CHEBI:16708 (9)
CHEBI:30769 (9)
CHEBI:30915 (8)
CHEBI:32816 (8)
CHEBI:6650 (8)
CHEBI:15422 (7)
CHEBI:17203 (7)
CHEBI:17368 (7)
CHEBI:18050 (7)
CHEBI:44897 (7)
CHEBI:7916 (7)
CHEBI:15729 (6)
CHEBI:15891 (6)
CHEBI:16347 (6)
CHEBI:16737 (6)
CHEBI:16761 (6)
CHEBI:16828 (6)
CHEBI:16856 (6)
CHEBI:16857 (6)
CHEBI:17596 (6)
CHEBI:17750 (6)
CHEBI:26078 (6)
CHEBI:15318 (5)
CHEBI:15603 (5)
CHEBI:15676 (5)
CHEBI:59132 (1)

Metabolite Name

AMP (8)
L-Glutamine (8)
L-Glutamate (7)
L-Proline (7)
L-Tryptophan (7)
Glycine (6)
Guanine (6)
Inosine (6)
L-Leucine (6)
L-Phenylalanine (6)
L-Threonine (6)
Adenine (5)
Choline (5)
L-Arginine (5)
L-Aspartate (5)
L-Ornithine (5)
Phosphoenolpyruvate (5)
Pyruvate (5)
Sn-glycero-3-Phosphocholine (5)
Succinate (5)
Xanthine (5)
(R)-2-Hydroxyglutarate (4)
(S)-Malate (4)
2-Oxoglutarate (4)
4-Trimethylammoniobutanoate (4)
Acetylcholine (4)
Choline phosphate (4)
Citrate (4)
Creatinine (4)
Cytidine (4)

IsPrivate

False (1)

First Public Date

2024 (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (8)
ChIP-seq (5)
Animal - High-throughput sequencing (2)
Comparative genomic hybridization by array (2)
Transcription profiling by SAGE (1)
Human - High-throughput sequencing (1)
Cell line - One-color microarray (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
Methylation profiling by array (1)
Proteomic profiling by array (1)
CUT&RUN (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (206)
2021 (194)
2025 (160)
2024 (143)
2020 (137)
2019 (137)
2023 (134)
2018 (78)
2017 (74)
2016 (71)
2015 (62)
2014 (43)
2013 (33)
2011 (33)
2012 (28)
2026 (28)
2010 (27)
2008 (21)
2009 (14)
2005 (7)
2007 (5)
2002 (5)
2004 (2)
2006 (1)

Lab affiliation

Department of Biology, University of Konstanz, Universitätsstraße 10, 78457 Konstanz, Germany (3)
Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Nijmegen, 6525 GA Nijmegen, The Netherlands (3)
Erasmus MC (2)
Section of Paediatric Infectious Diseases, Faculty of Medicine, Imperial College London, UK (2)
Baker Heart & Diabetes Institute (1)
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands. (1)
Department of Biology University of Konstanz Germany (1)
Department of Biology, University of Konstanz, Universitaetsstrasse 10, 78457 Konstanz, Germany (1)
Department of Chemistry University of Konstanz (1)
Department of Diagnostic Sciences, Ghent University, Ghent, Belgium. Cancer Research Institute Ghent (CRIG), Ghent, Belgium. (1)
Department of Laboratory Medicine, Laboratory of Hematology, Radboud University Medical Center, Research Institute for Medical Innovation, Nijmegen, The Netherlands. (1)
Department of Medical Genetics, University of British Columbia, Vancouver, Canada (1)
Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Oncode Institute, Radboud University Nijmegen, 6525 GA Nijmegen, The Netherlands (1)
Department of Plasma Proteins, Sanquin-AMC Landsteiner Laboratory, Amsterdam, The Netherlands (1)
Department of Systems Biology (Physiology). University of Alcala. Spain. (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Office B25A/04/94 Rue du Bugnon 25a, CH-1005 Lausanne (1)
Francis Impens, VIB-UGent Center for Medical Biotechnology, Ghent, Belgium.Department of Biomolecular Medicine, Ghent, Belgium. VIB Proteomics Core, Ghent, Belgium (1)
German Cancer Research Center (DKFZ) (1)
Institut Curie, Paris Sciences et Lettres Research University, INSERM U934/ CNRS, UMR3215 (1)
Institut Curie, Paris Sciences et Lettres Research University, INSERM U934/ CNRS, UMR3215 (1)
Institute of Genetics and Cancer The University of Edinburgh Western General Hospital Crewe Road South Edinburgh EH4 2XU (1)
MIVEGEC, Univ. Montpellier, IRD, CNRS, Montpellier, France (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Ghent University, B-9000 Ghent, Belgium (1)
Proteomics Center, Erasmus MC Rottrdam, the Netherlands (1)
Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen - the Netherlands (1)
Raymond H. Wittcoff Distinguished Professor and Head Department of Biochemistry and Molecular Biophysics Washington University School of Medicine St. Louis, MO 63110 (1)
Smurfit Institute of Genetics, Trinity College Dublin, Dublin, Ireland. (1)
U o Edinburgh (1)
University of British Columbia (1)
VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium. Department of Biomolecular Medicine, Ghent University, Ghent, Belgium. VIB Proteomics Core, VIB, Ghent, Belgium. (1)

Tags

xref:EuropePMC:PMC10285083 (1)

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Transcription profiling of S. cerevisiae during prolonged maltose limited cultivation

Prolonged cultivation (>25 generations) of Saccharomyces cerevisiae in aerobic, maltose-limited chemostat cultures led to profound physiological changes. Maltose hypersensitivity was observed when cells from prolonged cultivations were suddenly exposed to excess maltose. This substrate hypersensitiv...

ORGANISM(S): Saccharomyces cerevisiae

2008-06-16 | E-GEOD-8897 | biostudies-arrayexpress

Deletion of Zfp521 rescues the growth plate phenotype in a mouse model of Jansen metaphyseal chondrodysplasia.

Not available

S-EPMC3157684 | biostudies-literature

The detection of a strong episignature for Chung-Jansen syndrome, partially overlapping with Borjeson-Forssman-Lehmann and White-Kernohan syndromes.

Not available

S-EPMC11186873 | biostudies-literature

Association between Blood 25-Hydroxyvitamin D Levels and Survival in Colorectal Cancer Patients: An Updated Systematic Review and Meta-Analysis.

Not available

S-EPMC6073902 | biostudies-literature

Plant D-2-hydroxyglutarate dehydrogenase participates in the catabolism of lysine especially during senescence.

Not available

S-EPMC3064194 | biostudies-literature

PHIP-associated Chung-Jansen syndrome: Report of 23 new individuals.

Not available

S-EPMC9886139 | biostudies-literature

Prenatal Vitamin D, Multivitamin, and Folic Acid Supplementation and Brain Structure in Children with ADHD and ASD Traits: The Generation R Study.

Not available

S-EPMC12472298 | biostudies-literature

European experience of steroid therapy in children with developmental and epileptic encephalopathy with spike wave activation in sleep ((D)EE-SWAS).

Not available

S-EPMC12039249 | biostudies-literature

ATP-binding Cassette Sub-family C Member 5 (ABCC5) Functions as an Efflux Transporter of Glutamate Conjugates and Analogs

The ubiquitous efflux transporter ATP-binding cassette sub-family C member 5 (ABCC5) is present at high levels in the blood-brain barrier, neurons and glia, but its function is not known. Untargeted metabolomic screens revealed that Abcc5-/- mice accumulate endogenous glutamate conjugates in several...

2015-11-02 | MTBLS197 | MetaboLights

Influence of vitamin D on key bacterial taxa in infant microbiota in the KOALA Birth Cohort Study.

Not available

S-EPMC5679631 | biostudies-literature

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1758 Results

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