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ProteomicsAnalysis of RNA-dependent proteins in the cyanobacterium Synechocystis by RNase sensitive gradient profiling (Grad-R) Analysis of RNA-dependent proteins in the cyanobacterium Synechocystis by RNase sensitive gradient profiling (Grad-R)
RNA-binding proteins (RBPs) are an essential component of ribonucleoprotein complexes and are crucial for post-transcriptional regulation by regulatory sRNAs. Well-studied examples in different groups of bacteria include RBPs such as various ribosomal and RRM-domain containing proteins, or the RNA c...
ORGANISM(S): Synechocystis sp. PCC 6803 
2025-08-26 | PXD045848 | Pride
Cyanobacteria / post-transcriptional regulation / ribonucleoprotein complexes / rna-binding proteins / small regulatory rnas / sucrose-gradient fractionation 
TranscriptomicsHard-wiring in the Plasmodium falciparum transcriptome II
To help malaria parasites survive unpredictable host immune responses, it is known that genes for surface proteins express stochastically in Plasmodium falciparum. Here, we demonstrate that gene expression for intracellular metabolic functions may be preordained and insensitive to specific metabolic...
ORGANISM(S): Plasmodium falciparum 
2010-05-16 | E-GEOD-9868 | biostudies-arrayexpress
TranscriptomicsHard-wiring in the Plasmodium falciparum transcriptome 2
To help malaria parasites survive unpredictable host immune responses, it is known that genes for surface proteins express stochastically in Plasmodium falciparum. Here, we demonstrate that gene expression for intracellular metabolic functions may be preordained and insensitive to specific metabolic...
ORGANISM(S): Plasmodium falciparum 
2010-05-16 | E-GEOD-9853 | biostudies-arrayexpress
TranscriptomicsEvalutation of the effect of ethanol upon gene expression in adult Drosophila melanogaster
This experiment was intended to determine if topical exposure to ethanol led to significant changes in gene expression in adult Drosophila melanogaster. It was determined that topical exposure to ethanol did not lead to a strong differential expression of genes in Drosophila after 4 hours. The eff...
ORGANISM(S): Drosophila melanogaster 
2010-06-11 | E-GEOD-3033 | biostudies-arrayexpress
UnknownThe influence of mammogram acquisition on the mammographic density and breast cancer association in the Mayo Mammography Health Study cohort.
Not available
S-EPMC3701143 | biostudies-literature
TranscriptomicsDrosophila gene expression in response to the botanical insecticide Piper nigrum
This experiment was used to determine the effect of a botanical insecticide upon gene expression profiles in Drosophila melanogaster. Adult female Drosophila (oregon-R strain) were treated with an ethylacetate extract of Piper nigrum (Piperaceae) seeds formulated in 99% ethanol. Treatment was topi...
ORGANISM(S): Drosophila melanogaster 
2006-01-24 | E-GEOD-3032 | biostudies-arrayexpress
TranscriptomicsExon arrays from HT-29, MCF10A, and MDA-MB-436 cells
Expression data from HT-29 cells treated with IFN-γ for 24 hr, MCF10A cells, and MDA-MB-436 cells. Total RNA was isolated with the RNeasy Mini Kit (Qiagen). Sense-strand cDNA synthesis, terminal labeling, and hybridization were performed using Ambion WT Expression Kit (Applied Biosystems, P/N 44252...
ORGANISM(S): Homo sapiens 
2013-08-06 | E-GEOD-45195 | biostudies-arrayexpress
TranscriptomicsHT-29 cells treated with IFN-γ
Expression data from HT-29 human colon adenocarcinoma cells treated with IFN-γ for 24 hr Total RNA was isolated from HT-29 cells after 24h stimulation with 200 U ml-1 IFN-γ (Roche). The experiment was done on three biological replicates.
ORGANISM(S): Homo sapiens 
2013-08-06 | E-GEOD-38516 | biostudies-arrayexpress
UnknownRB1 expression and HR proficiency define a poor prognosis subtype of high grade serous ovarian cancer
Not available
S-EPMC12343831 | biostudies-literature
TranscriptomicsLM resistance
The combination therapy of the Artemisinin-derivative Artemether (ART) with Lumefantrine (LM) (Coartem®) is an important malaria treatment regimen in many endemic countries. Resistance to Artemisinin has already been reported, and it is feared that LM resistance (LMR) could also evolve quickly. Ther...
ORGANISM(S): Plasmodium falciparum 
2011-04-01 | E-TABM-1101 | biostudies-arrayexpress
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