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GenomicsTargeting the treponemal microbiome of digital dermatitis infections by deep coverage pyrosequencing
We examined 36 biopsies taken from digital dermatitis lesions of Holstein cows. The target was the V3 -V4 variable region of 16S rRNA using Treponema specific primers. We identified 20 different taxa of Treponema using this approach. Phylogenetic study of the Treponema taxa found in digital dermati...
ORGANISM(S): Bos taurus 
2013-06-25 | E-GEOD-42426 | biostudies-arrayexpress
TranscriptomicsGenome wide transcriptional portrait of Actinobacillus pleuropneumoniae during invasive disease reveals new strategies for survival and persistence in the host
The transcriptional profile of the porcine lung pathogen, Actinobacillus pleuropneumoniae, was monitored during the acute phase of infection in its natural host. Bacterial expression profiles of A. pleuropneumoniae isolated from lung lesions of 25 infected pigs were compared in samples taken 6, 12, ...
ORGANISM(S): Actinobacillus pleuropneumoniae 
2012-12-01 | E-GEOD-33999 | biostudies-arrayexpress
TranscriptomicsEarly pig response to experimental infection with Actinobacillus pleuropneomuniae
The objective of this study was to identify porcine genes which expression was affected by experimental infection with A. pleuropneumoniae within 24 hours after experimental challenge. Microarray experiments were conducted to reveal genes being significantly differentially expressed in infected vers...
ORGANISM(S): Sus scrofa 
2010-06-11 | E-GEOD-4577 | biostudies-arrayexpress
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