Jin Ye Y - OmicsDI

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Unknown (1067)
Proteomics (36)
Genomics (9)
Metabolomics (7)
Transcriptomics (1)

Organisms

Homo sapiens (23)
Acidithiobacillus ferrooxidans ATCC 53993 (16)
Aerococcus urinae NBRC 15544 = CCUG 36881 (16)
Allexis (16)
Arabidopsis thaliana (16)
Cyanophora paradoxa (16)
Ensifer adhaerens (16)
Enterococcus faecalis (16)
Globicatella sanguinis (16)
Helianthus annuus (16)
Histomonas meleagridis (16)
Leishmania major strain Friedlin (16)
Listeria monocytogenes (16)
Lotus japonicus (16)
Marchantia polymorpha (16)
Medicago truncatula (16)
Methylohalobius crimeensis 10Ki (16)
Mus musculus (16)
Mycobacterium tuberculosis (16)
Oryza sativa Indica Group (16)
Physcomitrium patens (16)
Pseudomonas putida KT2440 (16)
Rattus norvegicus (16)
Schizosaccharomyces pombe (16)
Schizosaccharomyces pombe 972h- (16)
Shigella (16)
Solanum lycopersicum (16)
Mus musculus (6)
Severe acute respiratory syndrome coronavirus 2 (1)
Spinacia oleracea (1)

Repository

iProX (16)
pride (16)
biostudies-arrayexpress (7)
MetaboLights (7)
EGA (4)
MassIVE (3)
PeptideAtlas (1)

Tissue

Epithelial cell (4)
Cell culture (3)
Heart (2)
Macrophage (2)
Brain (1)
Embryo (1)
HEK-293 cell (1)
HeLa cell (1)
HuH-7 cell (1)
Lung (1)
Plant cell (1)
Prostate cancer cell line (1)
Prostate gland epithelium (1)
Whole body (1)

Disease

Adenocarcinoma (1)
Breast cancer (1)
Cervix carcinoma (1)
Inflammation (1)
Prostate adenocarcinoma (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (16)
Mass spectrometry (6)
Bottom-up proteomics (5)
Shotgun proteomics (5)
Gel-based experiment (3)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - reverse phase (2)
GenePix 4000B [Axon Instruments] (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Q Exactive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)
Xevo G2 QTOF (Waters) (1)
LTQ Orbitrap (1)

Publication Date

2021 (9)
2023 (6)
2026 (5)
2024 (5)
2013 (3)
2022 (3)
2017 (3)
2025 (3)
2011 (2)
2014 (1)
2012 (1)
2010 (1)
2007 (1)
2019 (1)
2018 (1)

UNIPROT ID/AC

A0A024R8H9 (1)
A0A024RC46 (1)
A0A087WTX5 (1)
A0A087WVW2 (1)
A0A087WVZ5 (1)
A0A087WWA5 (1)
A0A087WWK8 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087X130 (1)
A0A087X1S3 (1)
A0A087X1V9 (1)
A0A0A0MR66 (1)
A0A0A0MS07 (1)
A0A0A0MS51 (1)
A0A0A0MSA7 (1)
A0A0C4DG89 (1)
A0A0C4DGT3 (1)
A0AVT1 (1)
A0FGR8 (1)
A0FGR8-2 (1)
A0FGR8-6 (1)
A0M8Q6 (1)
A0MZ66 (1)
A0PJX4 (1)
A1L0T0 (1)
A1L390 (1)
A2A3K4 (1)
A2BFH1 (1)
A2NUT2 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:16449 (3)
CHEBI:27266 (3)
CHEBI:25017 (3)
CHEBI:15891 (3)
CHEBI:26271 (3)
CHEBI:17596 (3)
CHEBI:16610 (2)
CHEBI:22660 (2)
CHEBI:16995 (2)
CHEBI:18237 (2)
CHEBI:17148 (2)
CHEBI:15729 (2)
CHEBI:15428 (2)
CHEBI:17234 (2)
CHEBI:15355 (2)
CHEBI:22653 (2)
CHEBI:24898 (2)
CHEBI:28044 (2)
CHEBI:16811 (2)
CHEBI:30768 (2)
CHEBI:30772 (2)
CHEBI:15366 (2)
CHEBI:16467 (2)
CHEBI:16359 (2)
CHEBI:6650 (2)
CHEBI:18257 (2)
CHEBI:26986 (2)
CHEBI:16335 (2)
CHEBI:17750 (2)
CHEBI:25094 (2)

Metabolite Name

Leucine (3)
Valine (3)
Proline (3)
Inosine (3)
Cholate (2)
Betaine (2)
Glycine (2)
Ornithine (2)
Pantothenic acid (2)
Methionine (2)
Choline (2)
Taurine (2)
Lysine (2)
Asparagine (2)
Tyrosine (2)
Adenosine (2)
Spermidine (2)
Alanine (2)
Uracil (2)
Threonine (2)
Phenylalanine (2)
Isoleucine (2)
Glucose (2)
Creatine (2)
Hypoxanthine (2)
3-acetyl-11-keto-beta-boswellic acid (1)
3-methyl-2-oxindole (1)
2-trans-hexadecenoic acid (1)
Rac-glycerol 1-myristate (1)
Methyl 2-hydroxy-4-{3-[(4-oxo-3-phenyl-4h-chromen-7-yl)oxy]propoxy}-3-propylbenzoate (1)

Study type

ChIP-seq (3)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by array (1)

Release Date

2025 (168)
2022 (155)
2023 (140)
2024 (129)
2021 (98)
2020 (83)
2019 (55)
2018 (50)
2017 (36)
2016 (32)
2026 (27)
2015 (26)
2014 (22)
2012 (16)
2011 (14)
2013 (12)
2010 (5)
2007 (1)
2009 (1)
2008 (1)
2005 (1)
2004 (1)
2000 (1)

Lab affiliation

Hangzhou Medical College (2)
Sencond Military Medical University (2)
Beijing Tongren Hospital, Capital Medical University (1)
Department of Biochemistry and Molecular Biology, Health Science Center, Ningbo University, Fenghua Road No.818, Ningbo, 315211, China. (1)
Department of Molecular Immunology, Institute of Basic Medical Sciences (1)
Department of Pathology and Duke Cancer Institute, Duke University School of Medicine, Durham, NC 27710, USA (1)
Key Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang University, China (1)
Laboratory of Molecular Oncology, Frontiers Science Center for Disease-related Molecular Network, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, China. (1)
School of Biomedical Sciences, The University of Hong Kong (1)
School of Medicine, Chinese University of Hong Kong, Shenzhen (1)
School of Pharmaceutical Sciences, Wenzhou Medical University (1)
Structural Biology (1)
The Chinese University of Hong Kong (1)
Zhejiang Provincial People’s Hospital (1)

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Identification of the role of autophagy-related TNFSF10/ hsa-let-7a-5p axis in vitiligo development and potential herbs exploring based on a bioinformatics analysis.

Not available

S-EPMC10750083 | biostudies-literature

Differentially expressed tRFs in CD5 positive relapsed & refractory diffuse large B cell lymphoma and the bioinformatic analysis for their potential clinical use.

Not available

S-EPMC6882323 | biostudies-literature

County-level colposcopy attendance in China's national cervical cancer screening programme: a cross-sectional ecological study of Fujian province.

Not available

S-EPMC12519705 | biostudies-literature

Hypericum perforatum L. extract alleviates metabolic-associated fatty liver disease through inflammation, lipid metabolism and ferroptosis modulation: a multi-omics perspective.

Not available

S-EPMC12673736 | biostudies-literature

Advanced Te_xS_y-C Nanocomposites for High-Performance Lithium Ion Batteries.

Not available

S-EPMC8186662 | biostudies-literature

Differential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells

Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...

2022-11-15 | MTBLS2352 | MetaboLights

A readability analysis of online mental health resources.

Not available

S-EPMC6453751 | biostudies-literature

Host Factors with Reduced Expression in Two HCV Permissive Cell Lines as Compared to the Non-Permissive Parent Cell Line Huh7

Drugs directly targeting Hepatitis C (HCV) are often rendered useless by the high mutation rate of the virus. Thus, we deduce that targeting of host factor that affect HCV replication may provide enhanced therapy fort HCV infection. Hepatocyte cell line Huh7 is known to be non-permissive for Hepatit...

ORGANISM(S): Homo sapiens

2011-05-01 | E-GEOD-25156 | biostudies-arrayexpress

Phosphorylation proteomic analysis of KCNN3-knockdown HCC cells to identify targeting proteins with phosphorylation changes

In order to identify the targeted proteins that undergo phosphorylation changes caused by KCNN3, we conducted a phosphorylation proteomics analysis on Huh7 cells that had been knocked down for KCNN3.

ORGANISM(S): Homo sapiens (Human)

2026-08-24 | PXD070980 | Pride

Effect of bariatric surgery on carotid intima-media thickness: A meta-analysis based on observational studies.

Not available

S-EPMC9871789 | biostudies-literature

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